Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold288G47243 Striga asiatica HOM05D000353 ORTHO05D000174 3.1e-136 488.4 243 100.0
SGA_v2.0_scaffold53G19410 Striga asiatica HOM05D002090 ORTHO05D000174 4.7e-55 218.8 192 66.1
SGA_v2.0_scaffold106G30698 Striga asiatica HOM05D000353 ORTHO05D000174 1.6e-31 140.6 162 48.8
SGA_v2.0_scaffold49G18365 Striga asiatica HOM05D024561 ORTHO05D002376 1.4e-22 110.9 164 42.1
SGA_v2.0_scaffold21G09448 Striga asiatica HOM05D000353 ORTHO05D000174 1.7e-17 94.0 81 61.7
SGA_v2.0_scaffold5G02543 Striga asiatica HOM05D000353 ORTHO05D000174 2.9e-17 93.2 62 66.1
SGA_v2.0_scaffold136G34989 Striga asiatica HOM05D000353 ORTHO05D000174 7.3e-16 88.6 150 38.7
SGA_v2.0_scaffold29G12295 Striga asiatica HOM05D002090 ORTHO05D001923 3.2e-11 73.2 66 62.1
Glyma.02G178600 Glycine max HOM05D002090 ORTHO05D001923 9.5e-08 61.6 140 32.1
Glyma.13G029300 Glycine max HOM05D002090 ORTHO05D001923 1.6e-07 60.8 158 26.6
Glyma.09G080300 Glycine max HOM05D002090 ORTHO05D001923 2.1e-07 60.5 158 29.7
Glyma.03G083300 Glycine max HOM05D002090 ORTHO05D001923 3.6e-07 59.7 160 30.0
Glyma.13G025000 Glycine max HOM05D002090 ORTHO05D001923 3.6e-07 59.7 139 30.9
Lsat_1_v5_gn_7_8760 Lactuca sativa HOM05D009063 ORTHO05D011082 3.6e-07 59.7 138 27.5
Glyma.09G106000 Glycine max HOM05D002090 ORTHO05D001923 4.7e-07 59.3 139 30.9
Glyma.18G142200 Glycine max HOM05D002090 ORTHO05D001923 6.2e-07 58.9 160 29.4
Lsat_1_v5_gn_1_2141 Lactuca sativa HOM05D009063 ORTHO05D011082 6.2e-07 58.9 113 33.6
HanXRQChr17g0556341 Helianthus annuus HOM05D007823 ORTHO05D000174 8.0e-07 58.5 174 31.6
Lsat_1_v5_gn_5_12101 Lactuca sativa HOM05D006609 ORTHO05D008551 8.0e-07 58.5 111 30.6
Glyma.07G214000 Glycine max HOM05D002090 ORTHO05D001923 1.1e-06 58.2 139 30.9
Glyma.03G121900 Glycine max HOM05D002090 ORTHO05D001923 1.8e-06 57.4 158 26.6
Glyma.17G216450 Glycine max HOM05D002090 ORTHO05D001923 1.8e-06 57.4 159 30.2
Glyma.19G107800 Glycine max HOM05D002090 ORTHO05D001923 1.8e-06 57.4 139 29.5
ECA246G2952 Erigeron canadensis HOM05D009063 ORTHO05D011082 8.9e-06 55.1 178 25.8


User provided reference genes

Program Settings