Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2881G54235 Striga asiatica HOM05D001925 ORTHO05D005701 2.4e-53 211.8 102 100.0
SGA_v2.0_scaffold4G02302 Striga asiatica HOM05D001925 ORTHO05D005701 1.9e-10 69.3 49 77.6
Nitab4.5_0000583g0200 Nicotiana tabacum HOM05D001925 ORTHO05D005701 4.0e-08 61.6 49 67.3
PGSC0003DMG400000174 Solanum tuberosum HOM05D001925 ORTHO05D005701 5.2e-08 61.2 49 65.3
CiPaw.01G062800 Carya illinoinensis HOM05D001925 ORTHO05D005701 8.9e-08 60.5 97 37.1
Nitab4.5_0006018g0050 Nicotiana tabacum HOM05D001925 ORTHO05D005701 1.2e-07 60.1 49 65.3
CAN.G78.90 Capsicum annuum HOM05D001925 ORTHO05D005701 1.5e-07 59.7 49 63.3
Prupe.2G172000 Prunus persica HOM05D001925 ORTHO05D005701 1.5e-07 59.7 97 38.1
Solyc01g094760.3 Solanum lycopersicum HOM05D001925 ORTHO05D005701 2.6e-07 58.9 49 63.3
Sopen01g038540 Solanum pennellii HOM05D001925 ORTHO05D005701 2.6e-07 58.9 49 63.3
RcHm_v2.0_Chr2g0161261 Rosa chinensis HOM05D001925 ORTHO05D005701 3.4e-07 58.5 52 57.7
RcHm_v2.0_Chr1g0355901 Rosa chinensis HOM05D001925 ORTHO05D005701 5.8e-07 57.8 72 45.8
FAN06G3551 Fragaria x ananassa HOM05D001925 ORTHO05D005701 7.5e-07 57.4 72 44.4
SGA_v2.0_scaffold67G22691 Striga asiatica HOM05D025150 ORTHO05D399791 7.5e-07 57.4 35 77.1
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 9.8e-07 57.0 72 44.4
FAN10G3665 Fragaria x ananassa HOM05D001925 ORTHO05D005701 9.8e-07 57.0 72 44.4
Cpa.g.sc11.17 Carica papaya HOM05D001925 ORTHO05D005701 1.3e-06 56.6 45 64.4
FvH4_7g14490 Fragaria vesca HOM05D001925 ORTHO05D005701 1.3e-06 56.6 72 44.4
FAN03G1293 Fragaria x ananassa HOM05D001925 ORTHO05D005701 1.3e-06 56.6 72 44.4
FAN06G1763 Fragaria x ananassa HOM05D001925 ORTHO05D005701 1.3e-06 56.6 72 44.4
FAN10G1478 Fragaria x ananassa HOM05D001925 ORTHO05D005701 1.3e-06 56.6 72 44.4
Oeu015817.1 Olea europaea HOM05D001925 ORTHO05D005701 1.3e-06 56.6 45 68.9
Rhsim07G0013900 Rhododendron simsii HOM05D001925 ORTHO05D005701 1.3e-06 56.6 100 38.0
Sc01g0003490 Simmondsia chinensis HOM05D001925 ORTHO05D005701 1.3e-06 56.6 45 62.2
SalBow3G0216 Salvia bowleyana HOM05D001925 ORTHO05D005701 2.2e-06 55.8 44 65.9
EL10Ac1g00402 Beta vulgaris HOM05D001925 ORTHO05D005701 2.9e-06 55.5 45 62.2
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 3.7e-06 55.1 97 37.1
GSVIVG01008477001 Vitis vinifera HOM05D001925 ORTHO05D005701 4.9e-06 54.7 49 59.2
Ah.05g180520 Amaranthus hybridus HOM05D001925 ORTHO05D001453 6.4e-06 54.3 44 63.6
MD01G1065000 Malus domestica HOM05D001925 ORTHO05D005701 6.4e-06 54.3 52 55.8
PSO384G0118 Papaver somniferum HOM05D001925 ORTHO05D005701 6.4e-06 54.3 45 62.2
Peaxi162Scf00020g00723 Petunia axillaris HOM05D001925 ORTHO05D005701 6.4e-06 54.3 49 59.2
QL04p053597 Quercus lobata HOM05D001925 ORTHO05D005701 6.4e-06 54.3 49 61.2
TAR636G2317 Trochodendron aralioides HOM05D001925 ORTHO05D005701 6.4e-06 54.3 101 32.7
Cc02_g38160 Coffea canephora HOM05D001925 ORTHO05D005701 8.3e-06 53.9 45 62.2
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 8.3e-06 53.9 45 60.0
Nn6g33390 Nelumbo nucifera HOM05D001925 ORTHO05D005701 8.3e-06 53.9 49 59.2


User provided reference genes

Program Settings