Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 3.0e-73 278.5 146 100.0
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 1.8e-70 269.2 156 92.9
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 7.3e-64 247.3 146 86.3
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 9.0e-62 240.4 141 84.4
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 1.2e-61 240.0 142 85.2
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 1.5e-61 239.6 140 84.3
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 3.4e-61 238.4 141 84.4
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 7.6e-61 237.3 141 83.7
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 2.9e-60 235.3 141 82.3
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 1.4e-59 233.0 141 81.6
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 1.4e-59 233.0 141 81.6
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 1.9e-59 232.6 141 80.9
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 1.9e-59 232.6 141 80.1
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 2.4e-59 232.3 141 80.9
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 5.4e-59 231.1 141 80.1
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 5.4e-59 231.1 141 80.9
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 5.4e-59 231.1 140 80.7
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 7.1e-59 230.7 141 79.4
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 9.3e-59 230.3 141 80.1
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 9.3e-59 230.3 141 82.3
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 1.2e-58 229.9 141 79.4
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 1.2e-58 229.9 141 80.9
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 1.2e-58 229.9 137 83.2
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 1.6e-58 229.6 141 79.4
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 2.1e-58 229.2 141 83.0
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 2.1e-58 229.2 141 80.9
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 2.1e-58 229.2 141 80.1
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 2.7e-58 228.8 140 80.7
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 2.7e-58 228.8 141 79.4
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 3.5e-58 228.4 141 79.4
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 4.6e-58 228.0 141 79.4
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 7.9e-58 227.3 141 80.1
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 7.9e-58 227.3 141 78.7
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 1.3e-57 226.5 140 79.3
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 2.3e-57 225.7 144 77.1
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 2.3e-57 225.7 141 77.3
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 3.0e-57 225.3 141 78.0
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 3.9e-57 224.9 141 78.0
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 5.1e-57 224.6 142 77.5
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 6.7e-57 224.2 142 81.0
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 1.1e-56 223.4 141 75.2
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 1.5e-56 223.0 141 77.3
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 1.5e-56 223.0 141 78.0
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 1.9e-56 222.6 141 78.0
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 3.3e-56 221.9 137 79.6
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 5.6e-56 221.1 141 77.3
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 7.4e-56 220.7 141 76.6
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 9.6e-56 220.3 141 75.9
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 9.6e-56 220.3 141 76.6
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 9.6e-56 220.3 131 85.5
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 9.6e-56 220.3 137 78.8
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.3e-55 219.9 140 77.9
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.3e-55 219.9 140 77.9
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 1.3e-55 219.9 137 78.8
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 2.1e-55 219.2 158 71.5
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 2.8e-55 218.8 140 77.1
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 3.7e-55 218.4 141 75.9
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 3.7e-55 218.4 141 75.9
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 1.4e-54 216.5 141 75.2
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 4.0e-54 214.9 140 75.7
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 5.3e-54 214.5 129 84.5
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 2.0e-53 212.6 141 75.2
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 4.5e-53 211.5 141 77.3
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 1.3e-52 209.9 150 73.3
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 2.9e-52 208.8 136 75.0
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 2.9e-52 208.8 140 70.7
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 6.4e-52 207.6 141 74.5
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 1.4e-51 206.5 148 72.3
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 3.5e-50 201.8 130 74.6
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 1.3e-49 199.9 142 71.8
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 1.3e-49 199.9 141 70.2
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 2.3e-49 199.1 141 71.6
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 3.0e-49 198.7 141 73.8
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 1.6e-47 193.0 138 71.0
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 2.1e-47 192.6 188 59.6
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 2.8e-47 192.2 140 70.0
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 8.2e-47 190.7 148 68.9
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 5.3e-46 188.0 111 82.9
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 9.0e-46 187.2 140 69.3
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 3.4e-45 185.3 141 66.0
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 4.5e-45 184.9 146 65.1
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 1.7e-44 183.0 111 80.2
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 3.2e-43 178.7 156 60.9
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 3.9e-41 171.8 110 74.5
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 1.3e-39 166.8 127 66.1
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 4.8e-39 164.9 143 58.7
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 4.8e-39 164.9 121 70.2
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 1.1e-38 163.7 135 59.3
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 2.4e-38 162.5 141 56.7
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 3.1e-38 162.2 141 56.7
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 4.1e-38 161.8 141 56.0
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 9.0e-38 160.6 141 56.0
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 9.0e-38 160.6 141 56.0
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 1.2e-37 160.2 141 55.3
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 2.0e-37 159.5 141 55.3
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 3.4e-37 158.7 141 55.3
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 3.4e-37 158.7 141 56.0
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 1.0e-36 157.1 141 54.6
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 1.0e-36 157.1 141 54.6
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 1.3e-36 156.8 141 53.9
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 2.2e-36 156.0 141 54.6
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 2.2e-36 156.0 141 54.6
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 2.2e-36 156.0 138 52.9
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 2.9e-36 155.6 133 56.4
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 2.9e-36 155.6 141 58.9
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 6.5e-36 154.5 116 68.1
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 7.9e-34 147.5 113 69.0
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 5.7e-32 141.4 100 70.0
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 9.7e-32 140.6 141 53.9
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 2.2e-31 139.4 142 54.9
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 2.6e-29 132.5 146 56.8
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 1.4e-25 120.2 81 71.6
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 1.7e-23 113.2 66 80.3
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 3.1e-22 109.0 65 76.9
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 1.1e-14 84.0 75 53.3
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 5.3e-14 81.6 61 62.3
Potri.010G163600 Populus trichocarpa HOM05D006937 ORTHO05D008747 5.3e-14 81.6 56 78.6
Sabra10G0124400 Salix brachista HOM05D006937 ORTHO05D008747 5.3e-14 81.6 140 41.4
Cpa.g.sc1.69 Carica papaya HOM05D006937 ORTHO05D008747 2.8e-07 59.3 31 90.3
Cre17.g711950 Chlamydomonas reinhardtii HOM05D006937 ORTHO05D008747 5.3e-06 55.1 101 33.7


User provided reference genes

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