Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold286G47115 Striga asiatica HOM05D008040 ORTHO05D010075 9.5e-247 856.3 402 100.0
SGA_v2.0_scaffold286G47111 Striga asiatica HOM05D008040 ORTHO05D010075 3.3e-223 778.1 435 86.7
Oeu009728.1 Olea europaea HOM05D008040 ORTHO05D010075 1.3e-97 360.9 374 49.7
Oeu009732.1 Olea europaea HOM05D001586 ORTHO05D001543 2.8e-97 359.8 377 49.6
SGA_v2.0_scaffold147G36326 Striga asiatica HOM05D008040 ORTHO05D010075 1.7e-62 244.2 400 37.5
Sabra08G0010200 Salix brachista HOM05D008040 ORTHO05D010075 6.1e-36 156.0 372 30.1
AUR62017713 Chenopodium quinoa HOM05D008040 ORTHO05D010075 3.1e-32 143.7 262 35.9
COL.COLO4_30844 Corchorus olitorius HOM05D008040 ORTHO05D010075 3.5e-31 140.2 283 35.3
COL.COLO4_31564 Corchorus olitorius HOM05D008040 ORTHO05D010075 4.5e-31 139.8 326 32.5
EL10Ac2g04156 Beta vulgaris HOM05D008040 ORTHO05D010075 5.9e-31 139.4 261 34.5
COL.COLO4_31567 Corchorus olitorius HOM05D008040 ORTHO05D010075 5.9e-31 139.4 286 34.6
COL.COLO4_31566 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.7e-30 137.9 325 32.3
AUR62035995 Chenopodium quinoa HOM05D008040 ORTHO05D010075 3.8e-30 136.7 269 33.5
RcHm_v2.0_Chr2g0102561 Rosa chinensis HOM05D008040 ORTHO05D010075 1.5e-29 134.8 297 32.0
COL.COLO4_12486 Corchorus olitorius HOM05D008040 ORTHO05D010075 2.1e-28 131.0 270 32.6
COL.COLO4_31563 Corchorus olitorius HOM05D008040 ORTHO05D010075 3.6e-28 130.2 286 32.2
Potri.013G110300 Populus trichocarpa HOM05D008040 ORTHO05D010075 3.4e-26 123.6 271 32.8
Aqoxy6G00905 Aquilegia oxysepala HOM05D008040 ORTHO05D010075 7.5e-26 122.5 285 31.2
COL.COLO4_10414 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.3e-25 121.7 269 31.6
AUR62008579 Chenopodium quinoa HOM05D008040 ORTHO05D010075 2.2e-25 120.9 265 29.8
QL04p017640 Quercus lobata HOM05D008040 ORTHO05D010075 2.2e-25 120.9 280 29.3
Potri.013G109900 Populus trichocarpa HOM05D008040 ORTHO05D010075 2.9e-25 120.6 274 31.8
CSS0013591 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 8.3e-25 119.0 296 30.7
QL04p017690 Quercus lobata HOM05D008040 ORTHO05D010075 1.1e-24 118.6 280 28.9
Nitab4.5_0005142g0030 Nicotiana tabacum HOM05D008040 ORTHO05D010075 4.1e-24 116.7 269 30.9
CSS0010874 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 5.4e-24 116.3 296 29.7
CSS0016313 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 7.0e-24 115.9 310 28.4
MD12G1211200 Malus domestica HOM05D008040 ORTHO05D010075 9.2e-24 115.5 329 29.2
RcHm_v2.0_Chr2g0102901 Rosa chinensis HOM05D008040 ORTHO05D010075 9.2e-24 115.5 302 28.8
MD12G1051600 Malus domestica HOM05D008040 ORTHO05D010075 5.9e-23 112.8 266 32.0
FAN23G2403 Fragaria x ananassa HOM05D008040 ORTHO05D010075 1.7e-22 111.3 298 29.9
COL.COLO4_10419 Corchorus olitorius HOM05D026534 ORTHO05D010075 2.3e-22 110.9 275 30.5
FAN26G0836 Fragaria x ananassa HOM05D008040 ORTHO05D010075 3.9e-22 110.2 312 29.2
Manes.09G072126 Manihot esculenta HOM05D008040 ORTHO05D010075 5.0e-22 109.8 260 28.8
FAN19G2417 Fragaria x ananassa HOM05D008040 ORTHO05D010075 8.6e-22 109.0 314 28.3
FvH4_1g14071 Fragaria vesca HOM05D008040 ORTHO05D010075 1.9e-21 107.8 314 28.3
CSS0049849 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 2.5e-21 107.5 303 30.0
QL09p019845 Quercus lobata HOM05D011629 ORTHO05D013267 1.2e-20 105.1 267 29.6
TWI77G0815 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 2.1e-20 104.4 290 30.0
FAN19G2662 Fragaria x ananassa HOM05D008040 ORTHO05D010075 8.0e-20 102.4 292 28.8
Os01g0876300 Oryza sativa ssp. japonica HOM05D000664 ORTHO05D000491 1.4e-19 101.7 246 29.3
vmacro17323 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 1.8e-19 101.3 224 32.6
vmacro17325 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 5.2e-19 99.8 224 32.1
Ciclev10026974m.g Citrus clementina HOM05D008040 ORTHO05D010075 2.0e-18 97.8 277 26.7
TWI12G0410 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 2.0e-18 97.8 317 26.8
Ciclev10006596m.g Citrus clementina HOM05D008040 ORTHO05D010075 4.4e-18 96.7 366 27.9
MBI01_g31985_MAGBIO Magnolia biondii HOM05D000664 ORTHO05D000491 1.3e-17 95.1 273 28.6
Zm00001eb146000 Zea mays HOM05D000664 ORTHO05D000491 1.3e-17 95.1 246 29.3
Zm00001eb366400 Zea mays HOM05D000664 ORTHO05D000491 1.7e-17 94.7 245 29.0
TWI12G0677 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 2.9e-17 94.0 297 28.3
Sabra08G0010400 Salix brachista HOM05D008040 ORTHO05D010075 8.3e-17 92.4 204 34.3
Ah.07g206250 Amaranthus hybridus HOM05D008040 ORTHO05D010075 4.1e-16 90.1 250 29.2
Prupe.7G151200 Prunus persica HOM05D008040 ORTHO05D010075 4.6e-15 86.7 311 25.4
Rhsim11G0097100 Rhododendron simsii HOM05D061936 ORTHO05D013267 2.3e-14 84.3 341 25.5
Ah.06g196070 Amaranthus hybridus HOM05D008040 ORTHO05D010075 3.9e-14 83.6 249 28.5
Rhsim11G0097300 Rhododendron simsii HOM05D061936 ORTHO05D010075 6.6e-14 82.8 341 25.2
COL.COLO4_14085 Corchorus olitorius HOM05D000206 ORTHO05D002863 3.3e-13 80.5 141 34.0
Potri.008G016300 Populus trichocarpa HOM05D008040 ORTHO05D010075 3.3e-13 80.5 81 51.9
CANSAT01G0762 Cannabis sativa HOM05D011629 ORTHO05D013267 4.3e-13 80.1 246 26.8
PSO761G0098 Papaver somniferum HOM05D008040 ORTHO05D010075 5.6e-13 79.7 388 24.2
SalBow8G3676 Salvia bowleyana HOM05D002420 ORTHO05D002422 5.6e-13 79.7 229 27.9
CANSAT01G1414 Cannabis sativa HOM05D011629 ORTHO05D013267 9.5e-13 79.0 246 26.4
Potri.008G016150 Populus trichocarpa HOM05D008040 ORTHO05D010075 3.6e-12 77.0 81 50.6
COL.COLO4_14086 Corchorus olitorius HOM05D011629 ORTHO05D013267 4.7e-12 76.6 193 28.0
PSO210G6465 Papaver somniferum HOM05D000664 ORTHO05D000491 4.7e-12 76.6 347 23.6
FvH4_2g35920 Fragaria vesca HOM05D000664 ORTHO05D000491 6.2e-12 76.3 281 28.5
RcHm_v2.0_Chr5g0059531 Rosa chinensis HOM05D000664 ORTHO05D000491 1.1e-11 75.5 224 29.9
Ah.02g122840 Amaranthus hybridus HOM05D008040 ORTHO05D010075 2.3e-11 74.3 217 27.2
Aqoxy3G00584 Aquilegia oxysepala HOM05D008040 ORTHO05D010075 3.1e-11 73.9 209 28.2
Os07g0535700 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 3.1e-11 73.9 279 25.4
DCAR_021781 Daucus carota HOM05D008040 ORTHO05D010075 4.0e-11 73.6 246 24.4
PSO339G3463 Papaver somniferum HOM05D008040 ORTHO05D010075 4.0e-11 73.6 263 26.2
Duzib187G1349 Durio zibethinus HOM05D002420 ORTHO05D002422 1.2e-10 72.0 198 27.8
QL04p017704 Quercus lobata HOM05D008040 ORTHO05D010075 1.2e-10 72.0 132 31.1
vmacro17324 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 1.2e-10 72.0 112 40.2
Os07g0535100 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 1.5e-10 71.6 282 23.0
COL.COLO4_16487 Corchorus olitorius HOM05D000007 ORTHO05D000521 3.4e-10 70.5 237 27.0
Os07g0535600 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 3.4e-10 70.5 265 24.2
Thecc.01G037600 Theobroma cacao HOM05D002420 ORTHO05D002422 4.4e-10 70.1 174 28.2
AUR62031522 Chenopodium quinoa HOM05D000664 ORTHO05D000491 5.8e-10 69.7 292 25.3
COL.COLO4_34989 Corchorus olitorius HOM05D000007 ORTHO05D000521 5.8e-10 69.7 306 26.8
DCAR_015714 Daucus carota HOM05D033045 ORTHO05D045062 5.8e-10 69.7 221 26.7
Psat2g144440 Pisum sativum HOM05D011629 ORTHO05D013267 5.8e-10 69.7 246 21.1
COL.COLO4_15974 Corchorus olitorius HOM05D000007 ORTHO05D000521 7.5e-10 69.3 301 26.6
FAN28G2855 Fragaria x ananassa HOM05D008040 ORTHO05D010075 7.5e-10 69.3 99 39.4
Potri.013G109701 Populus trichocarpa HOM05D008040 ORTHO05D010075 7.5e-10 69.3 194 24.7
Medtr3g011540 Medicago truncatula HOM05D011629 ORTHO05D013267 9.9e-10 68.9 137 29.2
TAR626G1986 Trochodendron aralioides HOM05D000664 ORTHO05D000491 9.9e-10 68.9 208 27.9
Nitab4.5_0002383g0130 Nicotiana tabacum HOM05D008898 ORTHO05D001155 1.7e-09 68.2 275 25.5
Thecc.03G149600 Theobroma cacao HOM05D000664 ORTHO05D000491 2.9e-09 67.4 282 28.0
AUR62012380 Chenopodium quinoa HOM05D000664 ORTHO05D000491 3.7e-09 67.0 265 26.0
FAN14G3348 Fragaria x ananassa HOM05D000664 ORTHO05D000491 6.4e-09 66.2 289 24.6
MBI05_g20724_MAGBIO Magnolia biondii HOM05D000664 ORTHO05D000491 8.3e-09 65.9 309 24.9
FAN21G0725 Fragaria x ananassa HOM05D000026 ORTHO05D000491 1.4e-08 65.1 211 28.4
Rhsim03G0249000 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.9e-08 64.7 206 27.2
PGSC0003DMG400025009 Solanum tuberosum HOM05D008898 ORTHO05D001155 1.9e-08 64.7 267 25.5
Aqoxy3G02433 Aquilegia oxysepala HOM05D008040 ORTHO05D010075 2.4e-08 64.3 194 20.6
Os07g0535200 Oryza sativa ssp. japonica HOM05D009359 ORTHO05D011905 2.4e-08 64.3 282 22.0
CSS0031414 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 4.1e-08 63.5 147 32.0
Duzib147G0480 Durio zibethinus HOM05D002420 ORTHO05D002422 4.1e-08 63.5 174 27.0
Sabra07G0023700 Salix brachista HOM05D002420 ORTHO05D002422 4.1e-08 63.5 275 23.3
COL.COLO4_22097 Corchorus olitorius HOM05D002420 ORTHO05D002422 5.4e-08 63.2 197 25.4
Peaxi162Scf00111g01479 Petunia axillaris HOM05D000664 ORTHO05D000491 5.4e-08 63.2 264 25.0
FAN27G2908 Fragaria x ananassa HOM05D000664 ORTHO05D000491 7.1e-08 62.8 103 39.8
CSS0008769 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 9.2e-08 62.4 210 26.7
Lj8C33T14 Lonicera japonica HOM05D000664 ORTHO05D000491 9.2e-08 62.4 208 26.0
PSO017G2897 Papaver somniferum HOM05D008040 ORTHO05D010075 9.2e-08 62.4 247 25.5
FvH4_2g35930 Fragaria vesca HOM05D000664 ORTHO05D000491 1.2e-07 62.0 103 40.8
FAN14G3142 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.6e-07 61.6 273 27.5
FAN16G1475 Fragaria x ananassa HOM05D000664 ORTHO05D000491 1.6e-07 61.6 211 27.0
CSS0011530 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 2.1e-07 61.2 210 26.7
Lj8C33T15 Lonicera japonica HOM05D000664 ORTHO05D000491 2.1e-07 61.2 209 25.8
Nitab4.5_0000136g0430 Nicotiana tabacum HOM05D002420 ORTHO05D002422 2.1e-07 61.2 215 23.7
FAN09G3500 Fragaria x ananassa HOM05D002893 ORTHO05D003387 3.5e-07 60.5 285 26.3
RcHm_v2.0_Chr2g0174881 Rosa chinensis HOM05D000664 ORTHO05D000491 3.5e-07 60.5 285 23.5
RcHm_v2.0_Chr2g0174951 Rosa chinensis HOM05D000664 ORTHO05D000491 3.5e-07 60.5 285 23.5
CSS0039427 Camellia sinensis var. sinensis HOM05D002420 ORTHO05D002422 4.6e-07 60.1 178 26.4
Potri.005G124500 Populus trichocarpa HOM05D002420 ORTHO05D002422 4.6e-07 60.1 272 23.9
Sabra01G0178200 Salix brachista HOM05D000664 ORTHO05D000491 4.6e-07 60.1 82 47.6
Psat5g225320 Pisum sativum HOM05D011629 ORTHO05D013267 6.0e-07 59.7 160 25.6
COL.COLO4_14087 Corchorus olitorius HOM05D011629 ORTHO05D013267 7.8e-07 59.3 81 35.8
Gorai.007G204100 Gossypium raimondii HOM05D002420 ORTHO05D002422 7.8e-07 59.3 174 26.4
Lj2P412T50 Lonicera japonica HOM05D000007 ORTHO05D000521 7.8e-07 59.3 201 28.4
DCAR_022308 Daucus carota HOM05D000007 ORTHO05D000521 1.3e-06 58.5 277 22.7
Gohir.D11G191500 Gossypium hirsutum HOM05D002420 ORTHO05D002422 1.3e-06 58.5 174 26.4
Lsat_1_v5_gn_4_183980 Lactuca sativa HOM05D002420 ORTHO05D002422 1.7e-06 58.2 175 26.9
Psat5g225280 Pisum sativum HOM05D011629 ORTHO05D013267 1.7e-06 58.2 137 25.5
QL09p021424 Quercus lobata HOM05D000007 ORTHO05D000039 1.7e-06 58.2 211 28.4
Ciclev10006867m.g Citrus clementina HOM05D000664 ORTHO05D000491 2.3e-06 57.8 273 23.1
FvH4_3g32490 Fragaria vesca HOM05D000664 ORTHO05D000491 2.3e-06 57.8 211 26.5
PGSC0003DMG400015473 Solanum tuberosum HOM05D002420 ORTHO05D002422 2.3e-06 57.8 188 27.1
SGA_v2.0_scaffold136G35012 Striga asiatica HOM05D000664 ORTHO05D000491 3.0e-06 57.4 95 37.9
THA.LOC104801597 Tarenaya hassleriana HOM05D000664 ORTHO05D000491 3.0e-06 57.4 257 26.8
Ciclev10022884m.g Citrus clementina HOM05D008040 ORTHO05D010075 3.9e-06 57.0 103 31.1
FAN02G3914 Fragaria x ananassa HOM05D000664 ORTHO05D000491 5.1e-06 56.6 168 32.1
FAN11G0439 Fragaria x ananassa HOM05D000664 ORTHO05D000491 5.1e-06 56.6 211 26.5
Nitab4.5_0003233g0040 Nicotiana tabacum HOM05D002420 ORTHO05D002422 5.1e-06 56.6 205 23.9
COL.COLO4_20224 Corchorus olitorius HOM05D000007 ORTHO05D000521 6.6e-06 56.2 220 28.2
Dinv23189 Davidia involucrata HOM05D000571 ORTHO05D000435 6.6e-06 56.2 284 23.9
FvH4_6g53072 Fragaria vesca HOM05D000664 ORTHO05D000491 6.6e-06 56.2 106 36.8
PGSC0003DMG400019444 Solanum tuberosum HOM05D002420 ORTHO05D002422 6.6e-06 56.2 179 26.3


User provided reference genes

Program Settings