Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold285G47069 Striga asiatica HOM05D000279 ORTHO05D402540 1.6e-129 466.1 226 100.0
SGA_v2.0_scaffold41G15779 Striga asiatica HOM05D000279 ORTHO05D000957 6.9e-61 238.0 133 85.0
SGA_v2.0_scaffold106G30601 Striga asiatica HOM05D000642 ORTHO05D000483 1.4e-13 80.9 57 66.7
PGSC0003DMG400028419 Solanum tuberosum HOM05D000642 ORTHO05D000483 4.0e-08 62.8 56 50.0
Solyc02g072140.1 Solanum lycopersicum HOM05D000642 ORTHO05D000483 5.2e-08 62.4 56 50.0
CAN.G411.48 Capsicum annuum HOM05D000642 ORTHO05D000483 6.8e-08 62.0 56 50.0
Nitab4.5_0012630g0010 Nicotiana tabacum HOM05D000642 ORTHO05D000483 1.2e-07 61.2 56 50.0
Sopen02g021100 Solanum pennellii HOM05D000642 ORTHO05D000483 1.2e-07 61.2 56 48.2
Cc02_g15640 Coffea canephora HOM05D000642 ORTHO05D000483 2.6e-07 60.1 51 52.9
MSTRG.7432 Avicennia marina HOM05D000642 ORTHO05D000483 4.4e-07 59.3 91 38.5
CSS0019511 Camellia sinensis var. sinensis HOM05D000642 ORTHO05D000483 5.7e-07 58.9 51 51.0
CSS0043174 Camellia sinensis var. sinensis HOM05D000642 ORTHO05D000483 5.7e-07 58.9 51 51.0
Oeu060180.1 Olea europaea HOM05D000642 ORTHO05D000483 7.5e-07 58.5 57 45.6
Cc05_g10970 Coffea canephora HOM05D000642 ORTHO05D000483 9.8e-07 58.2 52 48.1
Eucgr.F01250 Eucalyptus grandis HOM05D000642 ORTHO05D000483 9.8e-07 58.2 90 35.6
Oeu031019.1 Olea europaea HOM05D000642 ORTHO05D000483 9.8e-07 58.2 52 50.0
Oeu059256.1 Olea europaea HOM05D000642 ORTHO05D000483 1.3e-06 57.8 42 54.8
Zm00001eb404850 Zea mays HOM05D000642 ORTHO05D000483 2.8e-06 56.6 57 45.6
Migut.M01007 Erythranthe guttata HOM05D000642 ORTHO05D000483 6.3e-06 55.5 43 58.1
Nitab4.5_0000437g0020 Nicotiana tabacum HOM05D000642 ORTHO05D000483 6.3e-06 55.5 57 49.1
Zm00001eb194990 Zea mays HOM05D000642 ORTHO05D000483 6.3e-06 55.5 57 43.9
CiPaw.11G159000 Carya illinoinensis HOM05D000642 ORTHO05D000483 8.3e-06 55.1 52 44.2
Oeu039878.1 Olea europaea HOM05D000642 ORTHO05D000483 8.3e-06 55.1 49 49.0


User provided reference genes

Program Settings