Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2848G54225 Striga asiatica HOM05D006084 ORTHO05D007449 2.8e-64 248.4 126 100.0
MSTRG.3166 Avicennia marina HOM05D006084 ORTHO05D007449 3.4e-49 198.4 124 81.5
Migut.H00108 Erythranthe guttata HOM05D006084 ORTHO05D007449 1.9e-47 192.6 127 78.7
unitig_746.g26552 Utricularia gibba HOM05D006084 ORTHO05D007449 3.1e-42 175.3 125 70.4
Oeu004718.1 Olea europaea HOM05D006084 ORTHO05D007449 8.9e-42 173.7 127 69.3
Atru.chr6.2220 Acer truncatum HOM05D006084 ORTHO05D007449 1.7e-40 169.5 112 74.1
TAR371G1194 Trochodendron aralioides HOM05D006084 ORTHO05D007449 5.4e-39 164.5 112 72.3
Dinv33481 Davidia involucrata HOM05D006084 ORTHO05D007449 2.1e-38 162.5 118 67.8
CDE08G0643 Ceratophyllum demersum HOM05D006084 ORTHO05D007449 3.5e-38 161.8 120 65.8
Ca_16579_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 3.5e-38 161.8 114 70.2
Aqoxy3G02941 Aquilegia oxysepala HOM05D006084 ORTHO05D007449 6.0e-38 161.0 119 66.4
CAN.G206.22 Capsicum annuum HOM05D006084 ORTHO05D007449 7.8e-38 160.6 113 69.9
Eucgr.I01785 Eucalyptus grandis HOM05D006084 ORTHO05D007449 7.8e-38 160.6 115 68.7
QL02p076043 Quercus lobata HOM05D006084 ORTHO05D007449 1.0e-37 160.2 120 64.2
QL02p076078 Quercus lobata HOM05D006084 ORTHO05D007449 1.0e-37 160.2 120 64.2
Lalb_Chr10g0093921 Lupinus albus HOM05D006084 ORTHO05D007449 1.3e-37 159.8 113 71.7
Actinidia35746 Actinidia chinensis HOM05D006084 ORTHO05D007449 1.7e-37 159.5 119 68.1
Cc07_g02120 Coffea canephora HOM05D006084 ORTHO05D007449 1.7e-37 159.5 118 66.1
A02p02680 Brassica napus HOM05D006084 ORTHO05D007449 3.0e-37 158.7 120 66.7
BraA02t05237Z Brassica rapa HOM05D006084 ORTHO05D007449 3.0e-37 158.7 120 66.7
CiPaw.03G039200 Carya illinoinensis HOM05D006084 ORTHO05D007449 3.0e-37 158.7 113 68.1
Manes.17G116000 Manihot esculenta HOM05D006084 ORTHO05D007449 3.0e-37 158.7 113 70.8
Medtr3g088470 Medicago truncatula HOM05D006084 ORTHO05D007449 3.0e-37 158.7 114 67.5
Cfa007418 Carpinus fangiana HOM05D006084 ORTHO05D007449 5.1e-37 157.9 113 68.1
Potri.001G349500 Populus trichocarpa HOM05D006084 ORTHO05D007449 8.6e-37 157.1 118 66.9
Sc03g0007970 Simmondsia chinensis HOM05D006084 ORTHO05D007449 8.6e-37 157.1 120 64.2
BcaB01g05101 Brassica carinata HOM05D006084 ORTHO05D007449 1.1e-36 156.8 120 65.8
C03p07740 Brassica napus HOM05D006084 ORTHO05D007449 1.1e-36 156.8 120 65.8
BolC3t13274H Brassica oleracea HOM05D006084 ORTHO05D007449 1.1e-36 156.8 120 65.8
Haze_14684 Corylus avellana HOM05D006084 ORTHO05D007449 1.1e-36 156.8 113 68.1
A03p06720 Brassica napus HOM05D006084 ORTHO05D007449 1.5e-36 156.4 120 65.8
Sp6g29330 Schrenkiella parvula HOM05D006084 ORTHO05D007449 1.5e-36 156.4 120 66.7
Lj1g0023236 Lotus japonicus HOM05D006084 ORTHO05D007449 1.9e-36 156.0 114 66.7
ATR0730G058 Amborella trichopoda HOM05D006084 ORTHO05D007449 3.3e-36 155.2 118 65.3
GSVIVG01032459001 Vitis vinifera HOM05D006084 ORTHO05D007449 3.3e-36 155.2 114 68.4
CSS0000489 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 4.3e-36 154.8 113 68.1
CSS0035017 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 4.3e-36 154.8 113 68.1
Thhalv10015025m.g Eutrema salsugineum HOM05D006084 ORTHO05D007449 4.3e-36 154.8 120 65.0
RcHm_v2.0_Chr2g0172221 Rosa chinensis HOM05D006084 ORTHO05D007449 4.3e-36 154.8 116 65.5
ATR1096G027 Amborella trichopoda HOM05D006084 ORTHO05D007449 5.6e-36 154.5 118 64.4
CARHR198600 Cardamine hirsuta HOM05D006084 ORTHO05D007449 5.6e-36 154.5 120 65.8
Glyma.04G247000 Glycine max HOM05D006084 ORTHO05D007449 5.6e-36 154.5 119 63.9
Prupe.3G286100 Prunus persica HOM05D006084 ORTHO05D007449 5.6e-36 154.5 113 66.4
BraA03t10005Z Brassica rapa HOM05D006084 ORTHO05D007449 7.3e-36 154.1 119 65.5
TPR.G13476 Trifolium pratense HOM05D006084 ORTHO05D007449 7.3e-36 154.1 114 67.5
TWI12G0619 Tripterygium wilfordii HOM05D006084 ORTHO05D007449 7.3e-36 154.1 113 68.1
BcaC03g13452 Brassica carinata HOM05D006084 ORTHO05D007449 9.5e-36 153.7 120 65.0
C02p07250 Brassica napus HOM05D006084 ORTHO05D007449 9.5e-36 153.7 120 65.0
BolC2t06657H Brassica oleracea HOM05D006084 ORTHO05D007449 9.5e-36 153.7 120 65.0
PGSC0003DMG400000490 Solanum tuberosum HOM05D006084 ORTHO05D007449 9.5e-36 153.7 112 67.9
HanXRQChr14g0450361 Helianthus annuus HOM05D006084 ORTHO05D007449 1.2e-35 153.3 119 65.5
Hund02345 Selenicereus undatus HOM05D006084 ORTHO05D007449 1.2e-35 153.3 120 64.2
Carub.0006s1288 Capsella rubella HOM05D006084 ORTHO05D007449 1.6e-35 152.9 120 65.0
Rhsim08G0053800 Rhododendron simsii HOM05D006084 ORTHO05D007449 1.6e-35 152.9 120 63.3
AL6G25480 Arabidopsis lyrata HOM05D006084 ORTHO05D007449 2.8e-35 152.1 120 65.0
PSO566G0352 Papaver somniferum HOM05D006084 ORTHO05D007449 2.8e-35 152.1 113 66.4
BcaC04g19017 Brassica carinata HOM05D006084 ORTHO05D007449 3.6e-35 151.8 118 65.3
ECA238G3069 Erigeron canadensis HOM05D006084 ORTHO05D007449 3.6e-35 151.8 119 65.5
AT5G14710 Arabidopsis thaliana HOM05D006084 ORTHO05D007449 4.7e-35 151.4 120 64.2
Glyma.06G115700 Glycine max HOM05D006084 ORTHO05D007449 4.7e-35 151.4 119 61.3
HanXRQChr07g0198791 Helianthus annuus HOM05D006084 ORTHO05D007449 4.7e-35 151.4 119 64.7
Hma1.2p1_0846F.1_g227700 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 4.7e-35 151.4 113 67.3
Sopen02g031550 Solanum pennellii HOM05D006084 ORTHO05D007449 6.2e-35 151.0 112 67.9
BcaNung03101 Brassica carinata HOM05D006084 ORTHO05D007449 8.1e-35 150.6 115 66.1
Phvul.009G127800 Phaseolus vulgaris HOM05D006084 ORTHO05D007449 1.1e-34 150.2 119 62.2
Gohir.A07G221200 Gossypium hirsutum HOM05D006084 ORTHO05D007449 1.4e-34 149.8 113 65.5
arahy.Tifrunner.gnm1.ann1.2LS7ZQ Arachis hypogaea HOM05D006084 ORTHO05D007449 1.8e-34 149.4 117 65.0
arahy.Tifrunner.gnm1.ann1.DMWP0X Arachis hypogaea HOM05D006084 ORTHO05D007449 1.8e-34 149.4 113 67.3
MD17G1033600 Malus domestica HOM05D006084 ORTHO05D007449 1.8e-34 149.4 114 64.9
FvH4_6g50830 Fragaria vesca HOM05D006084 ORTHO05D007449 2.3e-34 149.1 115 64.3
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 2.3e-34 149.1 115 64.3
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 2.3e-34 149.1 115 64.3
Os10g0395500 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 2.3e-34 149.1 117 62.4
PGR142G2538 Punica granatum HOM05D006084 ORTHO05D007449 2.3e-34 149.1 104 70.2
PSO782G1469 Papaver somniferum HOM05D006084 ORTHO05D007449 3.1e-34 148.7 113 66.4
FAN14G2625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 6.8e-34 147.5 115 63.5
HPP92_022049 Vanilla planifolia HOM05D006084 ORTHO05D007449 6.8e-34 147.5 114 63.2
Thecc.04G011100 Theobroma cacao HOM05D006084 ORTHO05D007449 8.9e-34 147.1 113 65.5
Aa31LG11G14750 Aethionema arabicum HOM05D006084 ORTHO05D007449 1.2e-33 146.7 120 63.3
Gohir.D07G227900 Gossypium hirsutum HOM05D006084 ORTHO05D007449 1.2e-33 146.7 113 65.5
THA.LOC104821076 Tarenaya hassleriana HOM05D006084 ORTHO05D007449 1.2e-33 146.7 113 64.6
arahy.Tifrunner.gnm1.ann1.48HX9C Arachis hypogaea HOM05D006084 ORTHO05D007449 2.0e-33 146.0 113 65.5
C09p62430 Brassica napus HOM05D006084 ORTHO05D007449 3.4e-33 145.2 124 58.9
PSO210G7688 Papaver somniferum HOM05D006084 ORTHO05D007449 5.8e-33 144.4 113 61.9
Sed0018290 Sechium edule HOM05D006084 ORTHO05D007449 5.8e-33 144.4 120 59.2
Zm00001eb048120 Zea mays HOM05D006084 ORTHO05D007449 1.7e-32 142.9 113 62.8
CANSAT64G0964 Cannabis sativa HOM05D006084 ORTHO05D007449 6.4e-32 141.0 114 59.6
CsaV3_5G027340 Cucumis sativus L. HOM05D006084 ORTHO05D007449 6.4e-32 141.0 120 58.3
BolC9t59081H Brassica oleracea HOM05D006084 ORTHO05D007449 1.1e-31 140.2 124 58.1
Peaxi162Scf00129g01228 Petunia axillaris HOM05D006084 ORTHO05D007449 4.1e-31 138.3 100 69.0
Hma1.2p1_0056F.1_g031653 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 5.4e-31 137.9 101 68.3
MELO3C005689.2 Cucumis melo HOM05D006084 ORTHO05D007449 7.1e-31 137.5 120 57.5
COL.COLO4_28991 Corchorus olitorius HOM05D006084 ORTHO05D007449 1.6e-30 136.3 133 55.6
MBI19_g17406_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 1.6e-30 136.3 126 57.1
EL10Ac3g07214 Beta vulgaris HOM05D006084 ORTHO05D007449 2.1e-30 136.0 108 65.7
arahy.Tifrunner.gnm1.ann1.GQ5XJ3 Arachis hypogaea HOM05D006084 ORTHO05D007449 3.5e-30 135.2 133 54.9
Hma1.2p1_1415F.1_g281960 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 4.6e-30 134.8 100 68.0
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 7.8e-30 134.0 101 66.3
MBI19_g07248_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 5.1e-29 131.3 128 56.2
Gorai.001G262800 Gossypium raimondii HOM05D006084 ORTHO05D007449 8.6e-29 130.6 101 63.4
SHI16396 Sapria himalayana HOM05D006084 ORTHO05D007449 4.3e-28 128.3 103 60.2
ClCG00G003490 Citrullus lanatus HOM05D006084 ORTHO05D007449 2.1e-27 125.9 142 48.6
ClCG09G019010 Citrullus lanatus HOM05D006084 ORTHO05D007449 2.1e-27 125.9 142 48.6
Mapoly0005s0179 Marchantia polymorpha HOM05D006084 ORTHO05D007449 1.1e-26 123.6 114 54.4
Nn3g16859 Nelumbo nucifera HOM05D006084 ORTHO05D007449 1.8e-26 122.9 84 72.6
Duzib264G1216 Durio zibethinus HOM05D006084 ORTHO05D007449 3.1e-26 122.1 82 69.5
Lsat_1_v5_gn_2_91880 Lactuca sativa HOM05D006084 ORTHO05D007449 2.9e-24 115.5 119 54.6
Sabra16G0228900 Salix brachista HOM05D006084 ORTHO05D007449 2.9e-24 115.5 210 37.1
Ciclev10017692m.g Citrus clementina HOM05D006084 ORTHO05D007449 4.9e-24 114.8 68 75.0
Pp3c26_1260 Physcomitrium patens HOM05D006084 ORTHO05D007449 6.4e-24 114.4 127 45.7
AUR62031990 Chenopodium quinoa HOM05D006084 ORTHO05D007449 1.1e-23 113.6 120 52.5
Cpa.g.c30698.2 Carica papaya HOM05D006084 ORTHO05D007449 1.4e-23 113.2 83 71.1
Nitab4.5_0007141g0020 Nicotiana tabacum HOM05D006084 ORTHO05D007449 3.2e-23 112.1 109 56.0
SMO367G0706 Selaginella moellendorffii HOM05D006084 ORTHO05D007449 1.2e-22 110.2 100 54.0
Ca_03224_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 6.0e-22 107.8 90 60.0
Solyc02g086780.4 Solanum lycopersicum HOM05D006084 ORTHO05D007449 6.0e-22 107.8 76 72.4
DCAR_011237 Daucus carota HOM05D006084 ORTHO05D007449 1.3e-21 106.7 114 51.8
CBR_g5628 Chara braunii HOM05D006084 ORTHO05D007449 2.5e-20 102.4 105 45.7
Os01g0339600 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 2.8e-19 99.0 70 70.0
Nitab4.5_0006281g0070 Nicotiana tabacum HOM05D006084 ORTHO05D007449 1.1e-18 97.1 72 69.4
AUR62030334 Chenopodium quinoa HOM05D006084 ORTHO05D007449 1.8e-18 96.3 74 60.8
AagrBONN_evm.TU.Sc2ySwM_228.3157 Anthoceros agrestis HOM05D006084 ORTHO05D007449 2.6e-17 92.4 81 50.6
BraA10t44460Z Brassica rapa HOM05D006084 ORTHO05D007449 5.8e-17 91.3 89 57.3
arahy.Tifrunner.gnm1.ann1.2H702Y Arachis hypogaea HOM05D006084 ORTHO05D007449 3.8e-16 88.6 61 67.2
Cre13.g571000 Chlamydomonas reinhardtii HOM05D006084 ORTHO05D007449 1.6e-14 83.2 113 39.8
Dinv35076 Davidia involucrata HOM05D006084 ORTHO05D007449 1.4e-10 70.1 45 71.1
MELO3C033557.2 Cucumis melo HOM05D006084 ORTHO05D007449 1.8e-10 69.7 90 45.6
SEGI_25092 Sequoiadendron giganteum HOM05D006084 ORTHO05D007449 1.3e-08 63.5 64 45.3
MCO07G269 Micromonas commoda HOM05D006084 ORTHO05D007449 2.7e-06 55.8 111 33.3


User provided reference genes

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