Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold283G46961 Striga asiatica HOM05D005615 ORTHO05D007558 2.2e-213 745.3 375 100.0
Oeu018049.1 Olea europaea HOM05D005615 ORTHO05D007558 2.4e-191 672.2 377 89.4
Migut.N03069 Erythranthe guttata HOM05D005615 ORTHO05D007558 5.1e-186 654.4 374 86.6
MSTRG.22029 Avicennia marina HOM05D005615 ORTHO05D007558 5.0e-181 637.9 375 85.1
SGA_v2.0_scaffold12G06187 Striga asiatica HOM05D005615 ORTHO05D007558 1.1e-180 636.7 393 84.2
Thecc.05G003200 Theobroma cacao HOM05D005615 ORTHO05D007558 1.0e-178 630.2 371 83.6
Actinidia34618 Actinidia chinensis HOM05D005615 ORTHO05D007558 3.0e-178 628.6 363 84.3
Nitab4.5_0010690g0020 Nicotiana tabacum HOM05D005615 ORTHO05D007558 5.1e-178 627.9 376 83.2
Atru.chr3.1563 Acer truncatum HOM05D005615 ORTHO05D007558 6.7e-178 627.5 353 85.8
Atru.chr3.1585 Acer truncatum HOM05D005615 ORTHO05D007558 6.7e-178 627.5 353 85.8
Rhsim09G0030100 Rhododendron simsii HOM05D005615 ORTHO05D007558 6.7e-178 627.5 358 85.2
A03p24210 Brassica napus HOM05D005615 ORTHO05D007558 2.0e-177 625.9 378 82.0
BraA03t11630Z Brassica rapa HOM05D005615 ORTHO05D007558 2.0e-177 625.9 378 82.0
unitig_736.g22473 Utricularia gibba HOM05D005615 ORTHO05D007558 2.0e-177 625.9 374 82.4
GSVIVG01010734001 Vitis vinifera HOM05D005615 ORTHO05D007558 2.0e-177 625.9 368 83.4
CARHR138440 Cardamine hirsuta HOM05D005615 ORTHO05D007558 2.5e-177 625.5 358 84.9
BcaB01g03390 Brassica carinata HOM05D005615 ORTHO05D007558 3.3e-177 625.2 351 86.6
Cc03_g13240 Coffea canephora HOM05D005615 ORTHO05D007558 3.3e-177 625.2 352 86.9
Dinv44241 Davidia involucrata HOM05D005615 ORTHO05D007558 3.3e-177 625.2 351 86.3
Solyc06g073470.3 Solanum lycopersicum HOM05D005615 ORTHO05D007558 4.3e-177 624.8 376 83.2
Sopen06g029830 Solanum pennellii HOM05D005615 ORTHO05D007558 4.3e-177 624.8 376 83.2
PGSC0003DMG400026904 Solanum tuberosum HOM05D005615 ORTHO05D007558 4.3e-177 624.8 376 83.0
Dinv22646 Davidia involucrata HOM05D005615 ORTHO05D007558 5.7e-177 624.4 351 85.5
Duzib093G1513 Durio zibethinus HOM05D005615 ORTHO05D007558 7.4e-177 624.0 371 82.5
AL4G42040 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 1.7e-176 622.9 365 83.6
QL10p047743 Quercus lobata HOM05D005615 ORTHO05D007558 1.7e-176 622.9 368 81.8
Aqoxy2G04109 Aquilegia oxysepala HOM05D005615 ORTHO05D007558 4.8e-176 621.3 357 83.8
BraA05t19360Z Brassica rapa HOM05D005615 ORTHO05D007558 4.8e-176 621.3 377 81.7
PGR083G0205 Punica granatum HOM05D005615 ORTHO05D007558 4.8e-176 621.3 369 82.9
CiPaw.02G056100 Carya illinoinensis HOM05D005615 ORTHO05D007558 8.2e-176 620.5 360 83.3
Carub.0004s2582 Capsella rubella HOM05D005615 ORTHO05D007558 1.8e-175 619.4 351 85.8
Lsat_1_v5_gn_2_52041 Lactuca sativa HOM05D005615 ORTHO05D007558 2.4e-175 619.0 342 88.0
Nitab4.5_0002368g0110 Nicotiana tabacum HOM05D005615 ORTHO05D007558 2.4e-175 619.0 352 85.5
Manes.04G040500 Manihot esculenta HOM05D005615 ORTHO05D007558 3.1e-175 618.6 381 80.1
A05p03730 Brassica napus HOM05D005615 ORTHO05D007558 4.1e-175 618.2 377 81.2
VMungo1127G1033 Vigna mungo HOM05D005615 ORTHO05D007558 5.3e-175 617.8 367 82.6
BcaC02g12407 Brassica carinata HOM05D005615 ORTHO05D007558 6.9e-175 617.5 377 81.2
HanXRQChr14g0434901 Helianthus annuus HOM05D005615 ORTHO05D007558 6.9e-175 617.5 344 88.1
Sp4g25460 Schrenkiella parvula HOM05D005615 ORTHO05D007558 6.9e-175 617.5 365 82.7
Phvul.011G023300 Phaseolus vulgaris HOM05D005615 ORTHO05D007558 1.2e-174 616.7 375 81.6
Aa31LG1G25060 Aethionema arabicum HOM05D005615 ORTHO05D007558 1.5e-174 616.3 376 81.4
AT2G43360 Arabidopsis thaliana HOM05D005615 ORTHO05D007558 1.5e-174 616.3 366 82.8
C04p04420 Brassica napus HOM05D005615 ORTHO05D007558 1.5e-174 616.3 377 80.9
CsaV3_6G003770 Cucumis sativus L. HOM05D005615 ORTHO05D007558 2.0e-174 615.9 350 86.0
Glyma.12G020600 Glycine max HOM05D005615 ORTHO05D007558 2.0e-174 615.9 350 85.4
Nn7g37651 Nelumbo nucifera HOM05D005615 ORTHO05D007558 2.0e-174 615.9 357 84.3
Sed0015751 Sechium edule HOM05D005615 ORTHO05D007558 2.0e-174 615.9 351 84.9
Glyma.11G094200 Glycine max HOM05D005615 ORTHO05D007558 2.6e-174 615.5 367 82.3
Lj3g0021315 Lotus japonicus HOM05D005615 ORTHO05D007558 2.6e-174 615.5 352 84.4
BolC4t22075H Brassica oleracea HOM05D005615 ORTHO05D007558 4.5e-174 614.8 377 80.6
Lalb_Chr01g0001081 Lupinus albus HOM05D005615 ORTHO05D007558 5.9e-174 614.4 342 86.3
ClCG08G004320 Citrullus lanatus HOM05D005615 ORTHO05D007558 7.7e-174 614.0 351 85.5
Eucgr.A00054 Eucalyptus grandis HOM05D005615 ORTHO05D007558 1.0e-173 613.6 350 85.7
TAR362G0587 Trochodendron aralioides HOM05D005615 ORTHO05D007558 1.0e-173 613.6 366 82.8
arahy.Tifrunner.gnm1.ann1.2A1XYJ Arachis hypogaea HOM05D005615 ORTHO05D007558 1.3e-173 613.2 352 85.5
Thhalv10001495m.g Eutrema salsugineum HOM05D005615 ORTHO05D007558 1.3e-173 613.2 360 82.5
Potri.017G033300 Populus trichocarpa HOM05D005615 ORTHO05D007558 1.3e-173 613.2 372 80.4
Lalb_Chr03g0024511 Lupinus albus HOM05D005615 ORTHO05D007558 1.7e-173 612.8 343 85.7
Ciclev10020553m.g Citrus clementina HOM05D005615 ORTHO05D007558 2.2e-173 612.5 353 83.9
CANSAT78G0163 Cannabis sativa HOM05D005615 ORTHO05D007558 2.9e-173 612.1 368 81.2
Eucgr.A00256 Eucalyptus grandis HOM05D005615 ORTHO05D007558 3.8e-173 611.7 351 85.8
PSO675G8272 Papaver somniferum HOM05D005615 ORTHO05D007558 6.5e-173 610.9 351 84.9
MD04G1037300 Malus domestica HOM05D005615 ORTHO05D007558 8.5e-173 610.5 355 83.4
Sabra17G0020900 Salix brachista HOM05D005615 ORTHO05D007558 8.5e-173 610.5 372 79.8
DCAR_029917 Daucus carota HOM05D005615 ORTHO05D007558 1.9e-172 609.4 342 85.4
Sabra07G0102500 Salix brachista HOM05D005615 ORTHO05D007558 1.9e-172 609.4 359 83.3
PSO017G2630 Papaver somniferum HOM05D005615 ORTHO05D007558 3.2e-172 608.6 351 84.3
Sc13g0007050 Simmondsia chinensis HOM05D005615 ORTHO05D007558 4.2e-172 608.2 350 84.0
THA.LOC104803617 Tarenaya hassleriana HOM05D005615 ORTHO05D007558 4.2e-172 608.2 367 81.7
Cfa015769 Carpinus fangiana HOM05D005615 ORTHO05D007558 7.2e-172 607.4 357 82.6
Potri.007G126400 Populus trichocarpa HOM05D005615 ORTHO05D007558 7.2e-172 607.4 351 84.0
Zm00001eb037230 Zea mays HOM05D005615 ORTHO05D007558 7.2e-172 607.4 368 83.4
ECA238G2991 Erigeron canadensis HOM05D005615 ORTHO05D007558 9.4e-172 607.1 352 84.9
Os08g0540100 Oryza sativa ssp. japonica HOM05D005615 ORTHO05D007558 1.6e-171 606.3 369 81.8
TWI36G1239 Tripterygium wilfordii HOM05D005615 ORTHO05D007558 1.6e-171 606.3 353 83.9
Gohir.D01G221300 Gossypium hirsutum HOM05D005615 ORTHO05D007558 2.7e-171 605.5 351 84.6
Gorai.002G267900 Gossypium raimondii HOM05D005615 ORTHO05D007558 2.7e-171 605.5 351 84.6
Hund03143 Selenicereus undatus HOM05D005615 ORTHO05D007558 7.9e-171 604.0 341 85.3
Gohir.A01G231200 Gossypium hirsutum HOM05D005615 ORTHO05D007558 1.0e-170 603.6 342 86.0
RcHm_v2.0_Chr4g0408131 Rosa chinensis HOM05D005615 ORTHO05D007558 2.3e-170 602.4 347 82.7
Ca_26061_v3 Cicer arietinum L. HOM05D005615 ORTHO05D007558 5.1e-170 601.3 342 84.2
Haze_00733 Corylus avellana HOM05D005615 ORTHO05D007558 1.1e-169 600.1 363 81.5
MELO3C011628.2 Cucumis melo HOM05D005615 ORTHO05D007558 1.1e-169 600.1 382 78.5
Medtr4g076870 Medicago truncatula HOM05D005615 ORTHO05D007558 2.0e-169 599.4 374 79.4
Psat7g172600 Pisum sativum HOM05D005615 ORTHO05D007558 7.4e-169 597.4 375 78.4
TPR.G13757 Trifolium pratense HOM05D005615 ORTHO05D007558 7.4e-169 597.4 379 78.4
AUR62016250 Chenopodium quinoa HOM05D005615 ORTHO05D007558 1.3e-168 596.7 340 84.1
FAN17G1451 Fragaria x ananassa HOM05D005615 ORTHO05D007558 4.8e-168 594.7 345 82.3
EL10Ac3g05574 Beta vulgaris HOM05D005615 ORTHO05D007558 3.1e-167 592.0 356 80.9
ATR0743G064 Amborella trichopoda HOM05D005615 ORTHO05D007558 1.2e-166 590.1 339 83.8
CDE07G0588 Ceratophyllum demersum HOM05D005615 ORTHO05D007558 2.6e-166 589.0 352 82.1
AUR62034151 Chenopodium quinoa HOM05D005615 ORTHO05D007558 5.9e-166 587.8 340 83.8
Mapoly0041s0099 Marchantia polymorpha HOM05D005615 ORTHO05D007558 7.7e-166 587.4 359 80.5
SEGI_32939 Sequoiadendron giganteum HOM05D005615 ORTHO05D007558 2.9e-165 585.5 358 79.9
arahy.Tifrunner.gnm1.ann1.VQKS2I Arachis hypogaea HOM05D005615 ORTHO05D007558 5.0e-165 584.7 352 82.7
Pp3c11_17440 Physcomitrium patens HOM05D005615 ORTHO05D007558 8.8e-162 573.9 359 78.0
Pp3c1_16250 Physcomitrium patens HOM05D005615 ORTHO05D007558 5.9e-158 561.2 347 78.4
SMO358G0150 Selaginella moellendorffii HOM05D005615 ORTHO05D007558 5.9e-158 561.2 329 80.9
Lj6A60G37 Lonicera japonica HOM05D005615 ORTHO05D007558 1.9e-156 556.2 312 87.2
MBI11_g35028_MAGBIO Magnolia biondii HOM05D005615 ORTHO05D007558 2.5e-156 555.8 356 78.1
Ciclev10024495m.g Citrus clementina HOM05D005615 ORTHO05D007558 1.4e-154 550.1 353 76.8
BcaC01g05236 Brassica carinata HOM05D005615 ORTHO05D007558 4.1e-151 538.5 382 73.0
BolC3t15243H Brassica oleracea HOM05D005615 ORTHO05D007558 3.5e-150 535.4 377 72.9
AagrBONN_evm.TU.Sc2ySwM_362.1417 Anthoceros agrestis HOM05D003321 ORTHO05D005161 2.1e-147 526.2 315 78.4
AagrBONN_evm.TU.Sc2ySwM_344.4725 Anthoceros agrestis HOM05D005615 ORTHO05D007558 3.5e-142 508.8 348 69.8
Ciclev10024062m.g Citrus clementina HOM05D005615 ORTHO05D007558 2.9e-133 479.2 350 70.0
Prupe.1G186700 Prunus persica HOM05D005615 ORTHO05D007558 8.3e-128 461.1 263 84.4
Cpa.g.sc71.17 Carica papaya HOM05D005615 ORTHO05D007558 3.2e-127 459.1 252 87.3
CAN.G65.188 Capsicum annuum HOM05D005615 ORTHO05D007558 1.3e-125 453.8 260 85.8
HPP92_002777 Vanilla planifolia HOM05D005615 ORTHO05D007558 2.5e-124 449.5 258 83.7
FvH4_4g11460 Fragaria vesca HOM05D005615 ORTHO05D007558 1.3e-120 437.2 248 82.7
HPP92_028241 Vanilla planifolia HOM05D005615 ORTHO05D001525 4.7e-115 418.7 309 70.2
Cre06.g261150 Chlamydomonas reinhardtii HOM05D005615 ORTHO05D007558 5.6e-108 395.2 335 59.1
MCO13G117 Micromonas commoda HOM05D005615 ORTHO05D007558 1.1e-106 391.0 314 61.5
COL.COLO4_14419 Corchorus olitorius HOM05D005615 ORTHO05D007558 7.6e-105 384.8 214 88.3
Peaxi162Scf00375g00079 Petunia axillaris HOM05D005615 ORTHO05D007558 3.6e-99 365.9 222 83.3
Zm00001eb198320 Zea mays HOM05D005615 ORTHO05D007558 3.6e-99 365.9 197 90.9
FAN07G1681 Fragaria x ananassa HOM05D005615 ORTHO05D007558 1.0e-93 347.8 199 80.9
Haze_27367 Corylus avellana HOM05D005615 ORTHO05D007558 1.4e-79 300.8 298 50.3
vmacro00603 Vaccinium macrocarpon HOM05D005615 ORTHO05D007558 2.4e-74 283.5 234 62.4
AL3G36550 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 7.7e-57 225.3 121 90.1
CBR_g54828 Chara braunii HOM05D005615 ORTHO05D007558 2.6e-52 210.3 139 70.5
AL4G42060 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 1.8e-50 204.1 201 57.2
Actinidia27060 Actinidia chinensis HOM05D005615 ORTHO05D007558 6.7e-45 185.7 97 88.7
CBR_g54834 Chara braunii HOM05D005615 ORTHO05D007558 9.1e-42 175.3 104 81.7
CBR_g54836 Chara braunii HOM05D005615 ORTHO05D000002 7.7e-33 145.6 104 71.2
Cpa.g.sc71.16 Carica papaya HOM05D005615 ORTHO05D007558 3.8e-32 143.3 98 76.5
HPP92_002776 Vanilla planifolia HOM05D005615 ORTHO05D007558 1.3e-27 128.3 81 80.2
Psat3g051440 Pisum sativum HOM05D005615 ORTHO05D031631 3.7e-27 126.7 91 72.5
SalBow8G4084 Salvia bowleyana HOM05D005615 ORTHO05D007558 2.7e-25 120.6 67 86.6
CDE04G1318 Ceratophyllum demersum HOM05D005615 ORTHO05D007558 3.8e-24 116.7 70 80.0
Cpa.g.c45785 Carica papaya HOM05D005615 ORTHO05D007558 6.6e-24 115.9 60 88.3
Zm00001eb285620 Zea mays HOM05D001443 ORTHO05D001352 2.9e-19 100.5 124 49.2
Eucgr.A00259 Eucalyptus grandis HOM05D005615 ORTHO05D007558 1.1e-18 98.6 70 67.1


User provided reference genes

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