Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold283G46959 Striga asiatica HOM05D006500 ORTHO05D008028 2.8e-117 425.2 211 100.0
MSTRG.4301 Avicennia marina HOM05D006500 ORTHO05D008028 1.1e-76 290.4 160 88.8
SalBow3G2241 Salvia bowleyana HOM05D006500 ORTHO05D008028 2.4e-76 289.3 151 92.1
Migut.G01179 Erythranthe guttata HOM05D006500 ORTHO05D008028 5.4e-76 288.1 161 88.2
Oeu050336.1 Olea europaea HOM05D006500 ORTHO05D008028 7.6e-70 267.7 158 80.4
Oeu015723.1 Olea europaea HOM05D006500 ORTHO05D008028 4.9e-69 265.0 138 89.9
Sed0015541 Sechium edule HOM05D006500 ORTHO05D008028 5.1e-66 255.0 150 80.7
TWI38G1400 Tripterygium wilfordii HOM05D006500 ORTHO05D008028 8.7e-66 254.2 156 75.6
GSVIVG01038143001 Vitis vinifera HOM05D006500 ORTHO05D008028 8.7e-66 254.2 155 76.8
MELO3C022425.2 Cucumis melo HOM05D006500 ORTHO05D008028 1.5e-65 253.4 139 82.7
Thhalv10008926m.g Eutrema salsugineum HOM05D006500 ORTHO05D008028 1.5e-65 253.4 148 76.4
Dinv33205 Davidia involucrata HOM05D006500 ORTHO05D008028 2.5e-65 252.7 161 77.0
CARHR005240 Cardamine hirsuta HOM05D006500 ORTHO05D008028 3.3e-65 252.3 148 75.7
CsaV3_6G007030 Cucumis sativus L. HOM05D006500 ORTHO05D008028 3.3e-65 252.3 139 82.7
CAN.G136.13 Capsicum annuum HOM05D006500 ORTHO05D008028 4.3e-65 251.9 151 79.5
ClCG06G001100 Citrullus lanatus HOM05D006500 ORTHO05D008028 4.3e-65 251.9 150 77.3
Eucgr.A00110 Eucalyptus grandis HOM05D006500 ORTHO05D008028 4.3e-65 251.9 154 74.7
Eucgr.A00287 Eucalyptus grandis HOM05D006500 ORTHO05D008028 4.3e-65 251.9 154 74.7
Rhsim09G0010200 Rhododendron simsii HOM05D006500 ORTHO05D008028 4.3e-65 251.9 152 78.9
Carub.0001s0507 Capsella rubella HOM05D006500 ORTHO05D008028 5.6e-65 251.5 152 73.7
vmacro00698 Vaccinium macrocarpon HOM05D006500 ORTHO05D008028 5.6e-65 251.5 152 77.6
BcaC07g42119 Brassica carinata HOM05D006500 ORTHO05D008028 7.3e-65 251.1 148 74.3
Psat7g120240 Pisum sativum HOM05D006500 ORTHO05D008028 7.3e-65 251.1 160 74.4
Sed0014008 Sechium edule HOM05D006500 ORTHO05D008028 1.3e-64 250.4 139 81.3
CSS0014789 Camellia sinensis var. sinensis HOM05D006500 ORTHO05D008028 1.6e-64 250.0 152 75.7
Peaxi162Scf00180g00116 Petunia axillaris HOM05D006500 ORTHO05D008028 1.6e-64 250.0 151 77.5
Sp1g04540 Schrenkiella parvula HOM05D006500 ORTHO05D008028 1.6e-64 250.0 148 73.6
Gohir.A05G327700 Gossypium hirsutum HOM05D006500 ORTHO05D008028 2.1e-64 249.6 158 71.5
Potri.019G112100 Populus trichocarpa HOM05D006500 ORTHO05D008028 2.1e-64 249.6 157 73.9
AT1G05720 Arabidopsis thaliana HOM05D006500 ORTHO05D008028 2.8e-64 249.2 152 73.0
Solyc06g053430.4 Solanum lycopersicum HOM05D006500 ORTHO05D008028 2.8e-64 249.2 151 78.8
Sopen06g018490 Solanum pennellii HOM05D006500 ORTHO05D008028 2.8e-64 249.2 151 78.8
PGSC0003DMG400016334 Solanum tuberosum HOM05D006500 ORTHO05D008028 2.8e-64 249.2 151 78.8
BcaC07g42115 Brassica carinata HOM05D006500 ORTHO05D008028 3.6e-64 248.8 148 74.3
BcaC07g42118 Brassica carinata HOM05D006500 ORTHO05D008028 3.6e-64 248.8 148 74.3
A09p67320 Brassica napus HOM05D006500 ORTHO05D008028 3.6e-64 248.8 148 74.3
C08p51630 Brassica napus HOM05D006500 ORTHO05D008028 3.6e-64 248.8 148 74.3
BolC8t52691H Brassica oleracea HOM05D006500 ORTHO05D008028 3.6e-64 248.8 148 74.3
Actinidia27113 Actinidia chinensis HOM05D006500 ORTHO05D008028 4.8e-64 248.4 152 76.3
BraA09t42063Z Brassica rapa HOM05D006500 ORTHO05D008028 4.8e-64 248.4 148 74.3
COL.COLO4_08138 Corchorus olitorius HOM05D006500 ORTHO05D008028 4.8e-64 248.4 154 76.0
DCAR_023930 Daucus carota HOM05D006500 ORTHO05D008028 4.8e-64 248.4 152 77.0
Thecc.04G165600 Theobroma cacao HOM05D006500 ORTHO05D008028 6.2e-64 248.1 134 80.6
Nitab4.5_0001586g0010 Nicotiana tabacum HOM05D006500 ORTHO05D008028 8.1e-64 247.7 149 78.5
AL1G15630 Arabidopsis lyrata HOM05D006500 ORTHO05D008028 1.1e-63 247.3 152 73.0
Hma1.2p1_0108F.1_g051720 Hydrangea macrophylla HOM05D006500 ORTHO05D008028 1.1e-63 247.3 159 72.3
Lj4g0023361 Lotus japonicus HOM05D006500 ORTHO05D008028 1.1e-63 247.3 145 79.3
Sabra19G0108100 Salix brachista HOM05D006500 ORTHO05D008028 1.1e-63 247.3 151 75.5
Gohir.D05G327900 Gossypium hirsutum HOM05D006500 ORTHO05D008028 1.4e-63 246.9 158 70.9
Gorai.009G351800 Gossypium raimondii HOM05D006500 ORTHO05D008028 1.4e-63 246.9 158 70.9
TAR365G1104 Trochodendron aralioides HOM05D006500 ORTHO05D008028 1.8e-63 246.5 147 76.2
Duzib268G0518 Durio zibethinus HOM05D006500 ORTHO05D008028 3.1e-63 245.7 133 81.2
HanXRQChr14g0433631 Helianthus annuus HOM05D003327 ORTHO05D004535 3.1e-63 245.7 170 68.2
Potri.013G126900 Populus trichocarpa HOM05D006500 ORTHO05D008028 3.1e-63 245.7 159 69.8
Cc03_g14120 Coffea canephora HOM05D006500 ORTHO05D008028 5.3e-63 245.0 150 77.3
Cpa.g.sc9.364 Carica papaya HOM05D006500 ORTHO05D008028 9.0e-63 244.2 135 80.0
Nitab4.5_0002544g0040 Nicotiana tabacum HOM05D006500 ORTHO05D008028 9.0e-63 244.2 147 78.9
CiPaw.02G100400 Carya illinoinensis HOM05D006500 ORTHO05D008028 1.2e-62 243.8 163 71.8
Nn1g09644 Nelumbo nucifera HOM05D006500 ORTHO05D008028 1.5e-62 243.4 153 74.5
Duzib151G0460 Durio zibethinus HOM05D006500 ORTHO05D008028 2.0e-62 243.0 133 79.7
Hund03202 Selenicereus undatus HOM05D006500 ORTHO05D008028 2.0e-62 243.0 151 72.8
THA.LOC104800923 Tarenaya hassleriana HOM05D006500 ORTHO05D008028 2.6e-62 242.7 134 80.6
Atru.chr4.1419 Acer truncatum HOM05D006500 ORTHO05D008028 4.5e-62 241.9 152 72.4
Ca_18638_v3 Cicer arietinum L. HOM05D006500 ORTHO05D008028 4.5e-62 241.9 141 78.0
Ciclev10022516m.g Citrus clementina HOM05D006500 ORTHO05D008028 4.5e-62 241.9 149 75.2
MD17G1177800 Malus domestica HOM05D006500 ORTHO05D008028 4.5e-62 241.9 155 72.3
Aqoxy2G00124 Aquilegia oxysepala HOM05D006500 ORTHO05D008028 5.8e-62 241.5 148 73.0
QL10p055774 Quercus lobata HOM05D006500 ORTHO05D008028 5.8e-62 241.5 153 73.2
VMungo0251G2572 Vigna mungo HOM05D006500 ORTHO05D008028 5.8e-62 241.5 145 75.9
Lalb_Chr09g0328101 Lupinus albus HOM05D006500 ORTHO05D008028 9.9e-62 240.7 148 73.6
Phvul.003G296700 Phaseolus vulgaris HOM05D006500 ORTHO05D008028 9.9e-62 240.7 145 77.2
MD04G1049100 Malus domestica HOM05D006500 ORTHO05D008028 1.3e-61 240.4 154 71.4
BolC8t47013H Brassica oleracea HOM05D006500 ORTHO05D008028 1.7e-61 240.0 147 71.4
BcaB03g13492 Brassica carinata HOM05D006500 ORTHO05D008028 2.2e-61 239.6 145 72.4
BcaC07g36846 Brassica carinata HOM05D006500 ORTHO05D008028 2.2e-61 239.6 147 71.4
C08p02210 Brassica napus HOM05D006500 ORTHO05D008028 2.2e-61 239.6 147 71.4
CANSAT56G1821 Cannabis sativa HOM05D006500 ORTHO05D008028 2.2e-61 239.6 151 72.8
Glyma.07G207800 Glycine max HOM05D006500 ORTHO05D008028 2.2e-61 239.6 145 75.9
CiPaw.01G170700 Carya illinoinensis HOM05D006500 ORTHO05D008028 2.9e-61 239.2 155 72.9
Sc25g0002800 Simmondsia chinensis HOM05D006500 ORTHO05D008028 2.9e-61 239.2 134 77.6
Lsat_1_v5_gn_1_74920 Lactuca sativa HOM05D006500 ORTHO05D008028 3.8e-61 238.8 151 71.5
RcHm_v2.0_Chr4g0405941 Rosa chinensis HOM05D006500 ORTHO05D008028 3.8e-61 238.8 151 71.5
FAN17G0772 Fragaria x ananassa HOM05D006500 ORTHO05D008028 4.9e-61 238.4 144 77.1
Medtr4g087310 Medicago truncatula HOM05D006500 ORTHO05D008028 6.4e-61 238.0 158 70.3
Prupe.1G207200 Prunus persica HOM05D006500 ORTHO05D008028 6.4e-61 238.0 155 72.9
ECA248G2222 Erigeron canadensis HOM05D000003 ORTHO05D008028 8.4e-61 237.7 153 71.9
Glyma.02G137600 Glycine max HOM05D006500 ORTHO05D008028 8.4e-61 237.7 149 73.2
BraA08t35535Z Brassica rapa HOM05D006500 ORTHO05D008028 1.1e-60 237.3 164 65.9
Manes.11G129200 Manihot esculenta HOM05D006500 ORTHO05D008028 1.1e-60 237.3 155 70.3
arahy.Tifrunner.gnm1.ann1.A3K5YX Arachis hypogaea HOM05D006500 ORTHO05D008028 1.9e-60 236.5 146 74.7
arahy.Tifrunner.gnm1.ann1.SHKR8E Arachis hypogaea HOM05D006500 ORTHO05D008028 1.9e-60 236.5 146 74.7
FvH4_4g10450 Fragaria vesca HOM05D006500 ORTHO05D008028 1.9e-60 236.5 142 75.4
FAN12G2511 Fragaria x ananassa HOM05D006500 ORTHO05D008028 4.2e-60 235.3 143 76.2
EL10Ac3g06088 Beta vulgaris HOM05D006500 ORTHO05D008028 5.4e-60 235.0 157 67.5
A08p36310 Brassica napus HOM05D006500 ORTHO05D008028 9.3e-60 234.2 164 65.2
PSO675G9108 Papaver somniferum HOM05D006500 ORTHO05D008028 9.3e-60 234.2 145 72.4
AUR62023794 Chenopodium quinoa HOM05D006500 ORTHO05D008028 1.2e-59 233.8 145 71.0
PSO732G0103 Papaver somniferum HOM05D006500 ORTHO05D008028 1.2e-59 233.8 158 69.0
AUR62002395 Chenopodium quinoa HOM05D006500 ORTHO05D008028 1.6e-59 233.4 145 71.0
HPP92_003580 Vanilla planifolia HOM05D006500 ORTHO05D008028 1.0e-58 230.7 158 68.4
PGR083G1262 Punica granatum HOM05D006500 ORTHO05D008028 1.1e-57 227.3 159 69.2
Aa31LG1G8630 Aethionema arabicum HOM05D006500 ORTHO05D008028 2.8e-56 222.6 172 61.0
CDE04G3295 Ceratophyllum demersum HOM05D006500 ORTHO05D008028 4.8e-56 221.9 151 68.9
ATR0743G133 Amborella trichopoda HOM05D006500 ORTHO05D008028 6.2e-56 221.5 132 74.2
Os01g0894500 Oryza sativa ssp. japonica HOM05D006500 ORTHO05D008028 1.1e-55 220.7 136 72.1
unitig_46.g18636 Utricularia gibba HOM05D006500 ORTHO05D008028 1.8e-55 219.9 127 77.2
Lj3A158T10 Lonicera japonica HOM05D006500 ORTHO05D008028 5.3e-55 218.4 115 87.0
Zm00001eb144900 Zea mays HOM05D006500 ORTHO05D008028 2.0e-54 216.5 147 68.7
FAN22G1805 Fragaria x ananassa HOM05D006500 ORTHO05D008028 4.5e-54 215.3 191 57.6
FAN07G0402 Fragaria x ananassa HOM05D006500 ORTHO05D008028 1.3e-53 213.8 191 58.1
FAN12G1276 Fragaria x ananassa HOM05D006500 ORTHO05D008028 2.9e-53 212.6 195 56.4
SEGI_07767 Sequoiadendron giganteum HOM05D006500 ORTHO05D008028 4.9e-53 211.8 139 70.5
SMO119G0117 Selaginella moellendorffii HOM05D006500 ORTHO05D008028 2.2e-45 186.4 127 64.6
Haze_01362 Corylus avellana HOM05D006500 ORTHO05D008028 6.5e-45 184.9 146 63.7
MBI08_g33171_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 7.1e-44 181.4 102 80.4
TPR.G23526 Trifolium pratense HOM05D006500 ORTHO05D008028 7.1e-44 181.4 97 83.5
BcaC07g42121 Brassica carinata HOM05D006500 ORTHO05D008028 1.6e-43 180.3 148 57.4
Pp3c14_2450 Physcomitrium patens HOM05D006500 ORTHO05D008028 2.3e-42 176.4 132 59.1
Nn1g09666 Nelumbo nucifera HOM05D006500 ORTHO05D008028 2.3e-34 149.8 79 83.5
Ciclev10023175m.g Citrus clementina HOM05D006500 ORTHO05D008028 9.7e-25 117.9 71 73.2
SHI33478 Sapria himalayana HOM05D000105 ORTHO05D000023 9.1e-23 111.3 83 60.2
CAN.G701.5 Capsicum annuum HOM05D006500 ORTHO05D008028 4.7e-19 99.0 86 57.0
Cre01.g038950 Chlamydomonas reinhardtii HOM05D006500 ORTHO05D008028 4.1e-15 85.9 150 34.0
CBR_g27901 Chara braunii HOM05D006500 ORTHO05D008028 5.9e-14 82.0 130 35.4
MBI08_g33170_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 6.3e-08 62.0 50 58.0


User provided reference genes

Program Settings