Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold280G46866 Striga asiatica HOM05D018751 ORTHO05D012560 3.1e-101 371.7 176 100.0
SGA_v2.0_scaffold134G34684 Striga asiatica HOM05D018751 ORTHO05D012560 5.3e-93 344.4 182 92.3
SGA_v2.0_scaffold124G33587 Striga asiatica HOM05D018751 ORTHO05D012560 9.1e-93 343.6 182 91.2
SGA_v2.0_scaffold49G18173 Striga asiatica HOM05D018751 ORTHO05D012560 5.4e-53 211.5 175 64.0
EL10As7g23796 Beta vulgaris HOM05D000176 ORTHO05D000106 1.9e-18 96.7 120 41.7
EL10Ac1g00589 Beta vulgaris HOM05D000176 ORTHO05D000106 6.2e-17 91.7 111 43.2
EL10Ac2g04591 Beta vulgaris HOM05D000176 ORTHO05D000106 6.2e-17 91.7 109 43.1
EL10Ac3g07230 Beta vulgaris HOM05D000176 ORTHO05D000106 6.2e-17 91.7 111 43.2
EL10Ac5g11477 Beta vulgaris HOM05D000176 ORTHO05D000106 6.2e-17 91.7 111 43.2
EL10Ac6g14750 Beta vulgaris HOM05D000176 ORTHO05D000106 6.2e-17 91.7 109 43.1
EL10Ac6g15299 Beta vulgaris HOM05D000176 ORTHO05D000106 6.2e-17 91.7 109 43.1
EL10Ac2g02456 Beta vulgaris HOM05D000176 ORTHO05D000106 1.4e-16 90.5 111 43.2
EL10Ac6g14325 Beta vulgaris HOM05D000176 ORTHO05D000106 5.3e-16 88.6 120 38.3
EL10As6g23633 Beta vulgaris HOM05D000176 ORTHO05D000106 5.3e-16 88.6 120 35.8
EL10Ac4g09361 Beta vulgaris HOM05D000176 ORTHO05D000106 2.6e-15 86.3 111 41.4
EL10Ac1g01877 Beta vulgaris HOM05D018751 ORTHO05D012560 5.8e-15 85.1 137 35.8
Ah.01g016230 Amaranthus hybridus HOM05D000176 ORTHO05D000106 1.3e-14 84.0 118 38.1
Ah.01g016330 Amaranthus hybridus HOM05D018751 ORTHO05D012560 1.3e-14 84.0 118 38.1
Ah.01g016400 Amaranthus hybridus HOM05D000176 ORTHO05D000106 1.7e-14 83.6 118 38.1
EL10Ac4g08722 Beta vulgaris HOM05D000176 ORTHO05D012560 1.7e-14 83.6 135 37.0
EL10Ac9g20851 Beta vulgaris HOM05D000176 ORTHO05D012560 1.4e-13 80.5 114 33.3
EL10Ac1g01147 Beta vulgaris HOM05D000176 ORTHO05D012560 1.9e-13 80.1 114 36.8
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-10 69.3 122 36.9
EL10Ac4g08649 Beta vulgaris HOM05D000176 ORTHO05D000106 5.6e-10 68.6 119 36.1
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 5.6e-10 68.6 168 29.8
EL10Ac3g06558 Beta vulgaris HOM05D000176 ORTHO05D000106 7.4e-10 68.2 119 36.1
EL10Ac4g08651 Beta vulgaris HOM05D000176 ORTHO05D000106 7.4e-10 68.2 119 36.1
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 9.6e-10 67.8 122 35.2
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 9.6e-10 67.8 122 35.2
EL10Ac9g21153 Beta vulgaris HOM05D000176 ORTHO05D000106 1.3e-09 67.4 119 35.3
EL10Ac8g20250 Beta vulgaris HOM05D000176 ORTHO05D000106 1.6e-09 67.0 90 38.9
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-09 67.0 122 35.2
EL10Ac8g19525 Beta vulgaris HOM05D000176 ORTHO05D000106 2.1e-09 66.6 85 40.0
EL10Ac6g14181 Beta vulgaris HOM05D000176 ORTHO05D012560 3.7e-09 65.9 62 46.8
EL10Ac6g14384 Beta vulgaris HOM05D000176 ORTHO05D012560 3.7e-09 65.9 62 46.8
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 3.7e-09 65.9 122 35.2
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-08 64.3 118 34.7
EL10Ac7g17812 Beta vulgaris HOM05D000176 ORTHO05D000106 1.4e-08 63.9 86 38.4
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 1.8e-08 63.5 108 38.0
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 2.4e-08 63.2 167 31.7
MD06G1202700 Malus domestica HOM05D000115 ORTHO05D003511 3.1e-08 62.8 123 32.5
EL10Ac1g00132 Beta vulgaris HOM05D000176 ORTHO05D000106 4.0e-08 62.4 82 39.0
EL10Ac2g04872 Beta vulgaris HOM05D000176 ORTHO05D000106 4.0e-08 62.4 82 39.0
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 4.0e-08 62.4 136 33.1
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 4.0e-08 62.4 117 35.0
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 6.9e-08 61.6 118 35.6
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 9.0e-08 61.2 112 35.7
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 9.0e-08 61.2 121 33.1
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 1.5e-07 60.5 113 32.7
Rhsim05G0112400 Rhododendron simsii HOM05D011579 ORTHO05D011435 2.0e-07 60.1 138 31.2
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-07 59.7 109 32.1
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-07 59.7 109 32.1
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-07 59.7 123 34.1
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-07 59.7 109 32.1
EL10Ac2g02712 Beta vulgaris HOM05D000176 ORTHO05D000106 3.4e-07 59.3 114 36.0
EL10Ac7g17342 Beta vulgaris HOM05D000176 ORTHO05D000106 3.4e-07 59.3 114 36.0
EL10Ac7g17344 Beta vulgaris HOM05D000176 ORTHO05D000106 3.4e-07 59.3 114 36.0
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-07 59.3 109 32.1
EL10Ac5g12113 Beta vulgaris HOM05D000176 ORTHO05D002183 4.5e-07 58.9 114 35.1
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 5.8e-07 58.5 134 33.6
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 5.8e-07 58.5 121 33.1
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 7.6e-07 58.2 114 35.1
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 9.9e-07 57.8 121 32.2
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 9.9e-07 57.8 111 33.3
Lju124P4T4 Lonicera japonica HOM05D000176 ORTHO05D011435 9.9e-07 57.8 114 32.5
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-06 57.4 121 30.6
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-06 57.0 136 33.8
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-06 57.0 102 32.4
PSO675G0665 Papaver somniferum HOM05D013701 ORTHO05D012560 1.7e-06 57.0 121 31.4
EL10Ac6g14114 Beta vulgaris HOM05D000176 ORTHO05D000106 2.2e-06 56.6 114 35.1
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-06 56.6 123 33.3
EL10Ac7g17693 Beta vulgaris HOM05D000176 ORTHO05D000106 2.9e-06 56.2 63 44.4
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-06 55.8 112 30.4
EL10Ac9g20755 Beta vulgaris HOM05D000176 ORTHO05D000106 4.9e-06 55.5 82 36.6
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.9e-06 55.5 102 32.4
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 4.9e-06 55.5 102 33.3
Lj4A736T37 Lonicera japonica HOM05D000176 ORTHO05D000106 4.9e-06 55.5 117 33.3
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 4.9e-06 55.5 109 33.0
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 4.9e-06 55.5 113 31.0
Rhsim05G0108800 Rhododendron simsii HOM05D000808 ORTHO05D000863 4.9e-06 55.5 121 26.4
EL10Ac3g06792 Beta vulgaris HOM05D000176 ORTHO05D000106 6.4e-06 55.1 111 34.2
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 6.4e-06 55.1 109 32.1
PSO675G4184 Papaver somniferum HOM05D013701 ORTHO05D012560 6.4e-06 55.1 119 33.6
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 8.4e-06 54.7 118 32.2
PSO063G0537 Papaver somniferum HOM05D000176 ORTHO05D000106 8.4e-06 54.7 120 30.8


User provided reference genes

Program Settings