Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold280G46859 Striga asiatica HOM05D005654 ORTHO05D006438 1.9e-71 272.3 131 100.0
Migut.H02503 Erythranthe guttata HOM05D005654 ORTHO05D006438 2.0e-52 209.1 126 80.2
MSTRG.23266 Avicennia marina HOM05D005654 ORTHO05D006438 5.8e-52 207.6 126 79.4
SalBow8G3171 Salvia bowleyana HOM05D005654 ORTHO05D006438 3.5e-49 198.4 125 76.0
SGA_v2.0_scaffold9G04932 Striga asiatica HOM05D005654 ORTHO05D006438 1.0e-40 170.2 118 78.0
Lj2A460T79 Lonicera japonica HOM05D005654 ORTHO05D006438 5.1e-40 167.9 126 66.7
Oeu021744.2 Olea europaea HOM05D005654 ORTHO05D006438 6.6e-40 167.5 130 68.5
Solyc04g008800.3 Solanum lycopersicum HOM05D005654 ORTHO05D006438 5.6e-39 164.5 130 66.2
Actinidia26105 Actinidia chinensis HOM05D005654 ORTHO05D006438 1.3e-38 163.3 126 65.9
Sopen04g003980 Solanum pennellii HOM05D005654 ORTHO05D006438 3.6e-38 161.8 130 65.4
Nitab4.5_0007445g0010 Nicotiana tabacum HOM05D005654 ORTHO05D006438 1.4e-37 159.8 130 66.9
Dinv33576 Davidia involucrata HOM05D005654 ORTHO05D006438 5.3e-37 157.9 130 63.8
Nitab4.5_0002707g0030 Nicotiana tabacum HOM05D005654 ORTHO05D006438 1.2e-36 156.8 133 65.4
PGSC0003DMG400025306 Solanum tuberosum HOM05D005654 ORTHO05D006438 1.5e-36 156.4 130 63.1
Cc07_g10180 Coffea canephora HOM05D005654 ORTHO05D006438 7.6e-36 154.1 133 63.2
CSS0048601 Camellia sinensis var. sinensis HOM05D005654 ORTHO05D006438 1.7e-35 152.9 126 63.5
Hma1.2p1_1114F.1_g258780 Hydrangea macrophylla HOM05D005654 ORTHO05D006438 1.1e-34 150.2 130 60.0
Peaxi162Scf00329g00119 Petunia axillaris HOM05D005654 ORTHO05D006438 1.4e-34 149.8 131 61.8
unitig_747.g21954 Utricularia gibba HOM05D005654 ORTHO05D006438 2.4e-34 149.1 108 68.5
CAN.G419.13 Capsicum annuum HOM05D005654 ORTHO05D006438 7.1e-34 147.5 136 62.5
TWI60G0108 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 7.1e-34 147.5 137 59.9
MD10G1009400 Malus domestica HOM05D005654 ORTHO05D006438 2.3e-32 142.5 129 62.8
Thecc.01G026300 Theobroma cacao HOM05D005654 ORTHO05D006438 2.3e-32 142.5 129 61.2
MD05G1010700 Malus domestica HOM05D005654 ORTHO05D006438 3.0e-32 142.1 130 60.8
QL06p034798 Quercus lobata HOM05D005654 ORTHO05D006438 3.0e-32 142.1 125 58.4
QL10p007390 Quercus lobata HOM05D005654 ORTHO05D006438 3.0e-32 142.1 125 58.4
Ciclev10003765m.g Citrus clementina HOM05D005654 ORTHO05D006438 3.9e-32 141.7 131 56.5
ClCG09G019610 Citrullus lanatus HOM05D005654 ORTHO05D006438 5.1e-32 141.4 134 59.0
Eucgr.H02778 Eucalyptus grandis HOM05D005654 ORTHO05D006438 5.1e-32 141.4 130 58.5
Gohir.A11G179400 Gossypium hirsutum HOM05D005654 ORTHO05D006438 5.1e-32 141.4 131 60.3
CANSAT01G3286 Cannabis sativa HOM05D005654 ORTHO05D006438 1.5e-31 139.8 126 60.3
MELO3C005244.2 Cucumis melo HOM05D005654 ORTHO05D006438 1.9e-31 139.4 135 57.8
CiPaw.08G137200 Carya illinoinensis HOM05D005654 ORTHO05D006438 2.5e-31 139.0 127 59.1
CsaV3_5G027780 Cucumis sativus L. HOM05D005654 ORTHO05D006438 2.5e-31 139.0 135 57.8
Gorai.007G199000 Gossypium raimondii HOM05D005654 ORTHO05D006438 4.3e-31 138.3 131 59.5
QL08p063081 Quercus lobata HOM05D005654 ORTHO05D006438 7.4e-31 137.5 134 55.2
COL.COLO4_21992 Corchorus olitorius HOM05D005654 ORTHO05D006438 9.6e-31 137.1 130 58.5
FvH4_2g15150 Fragaria vesca HOM05D005654 ORTHO05D006438 1.3e-30 136.7 129 55.8
Gohir.D11G187100 Gossypium hirsutum HOM05D005654 ORTHO05D006438 1.3e-30 136.7 130 59.2
FAN07G1349 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.6e-30 136.3 130 57.7
Haze_03832 Corylus avellana HOM05D005654 ORTHO05D006438 2.1e-30 136.0 126 54.0
RcHm_v2.0_Chr6g0277811 Rosa chinensis HOM05D005654 ORTHO05D006438 2.1e-30 136.0 130 56.9
PGR119G1083 Punica granatum HOM05D005654 ORTHO05D006438 2.8e-30 135.6 143 53.1
Lj3g0016616 Lotus japonicus HOM05D005654 ORTHO05D006438 3.6e-30 135.2 127 58.3
FAN17G0825 Fragaria x ananassa HOM05D005654 ORTHO05D006438 4.8e-30 134.8 132 59.1
GSVIVG01018856001 Vitis vinifera HOM05D005654 ORTHO05D006438 4.8e-30 134.8 128 58.6
Lalb_Chr06g0172541 Lupinus albus HOM05D005654 ORTHO05D006438 1.1e-29 133.7 148 52.7
TAR381G0206 Trochodendron aralioides HOM05D005654 ORTHO05D006438 1.1e-29 133.7 128 55.5
Manes.02G099200 Manihot esculenta HOM05D005654 ORTHO05D006438 1.8e-29 132.9 132 54.5
Lj5g0021075 Lotus japonicus HOM05D005654 ORTHO05D006438 3.1e-29 132.1 127 57.5
Potri.007G018300 Populus trichocarpa HOM05D005654 ORTHO05D006438 4.0e-29 131.7 136 53.7
Oeu035320.1 Olea europaea HOM05D005654 ORTHO05D006438 9.0e-29 130.6 76 81.6
Lsat_1_v5_gn_9_115780 Lactuca sativa HOM05D005654 ORTHO05D006438 1.5e-28 129.8 136 57.4
Sabra07G0015400 Salix brachista HOM05D005654 ORTHO05D006438 1.5e-28 129.8 135 53.3
FAN22G0080 Fragaria x ananassa HOM05D005654 ORTHO05D006438 2.6e-28 129.0 130 55.4
Sed0005955 Sechium edule HOM05D005654 ORTHO05D006438 2.6e-28 129.0 128 57.0
Glyma.13G002400 Glycine max HOM05D005654 ORTHO05D006438 4.5e-28 128.3 133 56.4
Manes.01G140500 Manihot esculenta HOM05D005654 ORTHO05D006438 4.5e-28 128.3 136 55.9
Prupe.8G013400 Prunus persica HOM05D005654 ORTHO05D006438 5.8e-28 127.9 129 57.4
THA.LOC104819191 Tarenaya hassleriana HOM05D005654 ORTHO05D006438 7.6e-28 127.5 130 52.3
BraA03t13914Z Brassica rapa HOM05D000363 ORTHO05D005000 9.9e-28 127.1 128 57.0
Thhalv10010748m.g Eutrema salsugineum HOM05D005654 ORTHO05D006438 9.9e-28 127.1 138 53.6
FvH4_4g16440 Fragaria vesca HOM05D005654 ORTHO05D006438 9.9e-28 127.1 130 53.8
FAN12G4326 Fragaria x ananassa HOM05D005654 ORTHO05D006438 9.9e-28 127.1 130 53.8
Nn1g05784 Nelumbo nucifera HOM05D005654 ORTHO05D006438 1.3e-27 126.7 127 52.8
C07p46090 Brassica napus HOM05D000363 ORTHO05D005000 1.7e-27 126.3 128 56.2
BolC7t45125H Brassica oleracea HOM05D000363 ORTHO05D005000 1.7e-27 126.3 128 56.2
Psat0s439g0080 Pisum sativum HOM05D005654 ORTHO05D006438 1.7e-27 126.3 126 56.3
A03p48070 Brassica napus HOM05D000363 ORTHO05D005000 2.9e-27 125.6 128 56.2
Glyma.16G220800 Glycine max HOM05D005654 ORTHO05D006438 2.9e-27 125.6 132 55.3
Ca_14022_v3 Cicer arietinum L. HOM05D005654 ORTHO05D006438 3.8e-27 125.2 125 56.0
Glyma.20G066700 Glycine max HOM05D005654 ORTHO05D006438 3.8e-27 125.2 132 54.5
Ah.08g209860 Amaranthus hybridus HOM05D005654 ORTHO05D006438 6.4e-27 124.4 145 49.7
AT3G51010 Arabidopsis thaliana HOM05D005654 ORTHO05D006438 6.4e-27 124.4 139 54.0
Cpa.g.sc217.22 Carica papaya HOM05D005654 ORTHO05D006438 8.4e-27 124.0 161 46.6
VMungo0331G0515 Vigna mungo HOM05D005654 ORTHO05D006438 8.4e-27 124.0 128 53.9
PSO170G2173 Papaver somniferum HOM05D005654 ORTHO05D006438 1.1e-26 123.6 132 56.8
PSO528G0264 Papaver somniferum HOM05D005654 ORTHO05D006438 1.1e-26 123.6 134 56.0
BcaC06g33063 Brassica carinata HOM05D005654 ORTHO05D006438 1.9e-26 122.9 129 55.8
Phvul.010G058900 Phaseolus vulgaris HOM05D005654 ORTHO05D006438 1.9e-26 122.9 137 53.3
Psat2g190960 Pisum sativum HOM05D005654 ORTHO05D006438 1.9e-26 122.9 124 56.5
FAN24G1434 Fragaria x ananassa HOM05D005654 ORTHO05D006438 3.2e-26 122.1 165 46.7
Nn5g29728 Nelumbo nucifera HOM05D005654 ORTHO05D006438 3.2e-26 122.1 127 50.4
TPR.G24134 Trifolium pratense HOM05D005654 ORTHO05D006438 3.2e-26 122.1 130 53.8
A09p44110 Brassica napus HOM05D000363 ORTHO05D006438 5.5e-26 121.3 130 53.8
BraA09t39870Z Brassica rapa HOM05D005654 ORTHO05D006438 5.5e-26 121.3 130 53.8
AL5G31430 Arabidopsis lyrata HOM05D005654 ORTHO05D006438 7.1e-26 120.9 139 52.5
ECA248G0981 Erigeron canadensis HOM05D005654 ORTHO05D006438 7.1e-26 120.9 134 53.7
BcaC07g39579 Brassica carinata HOM05D005654 ORTHO05D006438 1.2e-25 120.2 138 50.7
C08p26310 Brassica napus HOM05D005654 ORTHO05D006438 1.2e-25 120.2 138 50.7
Medtr8g077440 Medicago truncatula HOM05D005654 ORTHO05D006438 1.2e-25 120.2 127 56.7
BolC8t50249H Brassica oleracea HOM05D005654 ORTHO05D006438 2.1e-25 119.4 138 50.7
Carub.0005s1741 Capsella rubella HOM05D005654 ORTHO05D006438 2.1e-25 119.4 133 51.1
Sc18g0007030 Simmondsia chinensis HOM05D005654 ORTHO05D006438 2.1e-25 119.4 136 52.2
MBI01_g45163_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 3.5e-25 118.6 143 51.7
BcaB01g00554 Brassica carinata HOM05D005654 ORTHO05D006438 4.6e-25 118.2 130 52.3
Sp5g11200 Schrenkiella parvula HOM05D005654 ORTHO05D006438 1.0e-24 117.1 132 51.5
HanXRQChr10g0278901 Helianthus annuus HOM05D005654 ORTHO05D006438 1.8e-24 116.3 122 54.9
Dinv33575 Davidia involucrata HOM05D005654 ORTHO05D006438 3.0e-24 115.5 66 80.3
PSO339G4156 Papaver somniferum HOM05D005654 ORTHO05D006438 3.0e-24 115.5 134 53.7
BcaNung00403 Brassica carinata HOM05D005654 ORTHO05D006438 3.9e-24 115.2 131 51.9
DCAR_025978 Daucus carota HOM05D005654 ORTHO05D006438 6.7e-24 114.4 132 55.3
AUR62027117 Chenopodium quinoa HOM05D005654 ORTHO05D006438 2.5e-23 112.5 138 52.2
CDE04G0601 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 7.4e-23 110.9 132 48.5
arahy.Tifrunner.gnm1.ann1.IV76VY Arachis hypogaea HOM05D005654 ORTHO05D006438 1.6e-22 109.8 151 45.0
Hund00373 Selenicereus undatus HOM05D005654 ORTHO05D006438 1.6e-22 109.8 146 47.3
Aa31LG4G19130 Aethionema arabicum HOM05D005654 ORTHO05D006438 2.8e-22 109.0 135 46.7
CDE12G0226 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 2.8e-22 109.0 136 47.8
AUR62012893 Chenopodium quinoa HOM05D005654 ORTHO05D006438 3.7e-22 108.6 138 52.2
Aqoxy6G01210 Aquilegia oxysepala HOM05D005654 ORTHO05D006438 6.2e-22 107.8 131 47.3
Lj4A211T64 Lonicera japonica HOM05D005654 ORTHO05D006438 4.0e-21 105.1 149 48.3
Os05g0126200 Oryza sativa ssp. japonica HOM05D005654 ORTHO05D006438 2.0e-20 102.8 142 47.9
ATR0605G129 Amborella trichopoda HOM05D005654 ORTHO05D006438 2.6e-20 102.4 127 47.2
HPP92_013005 Vanilla planifolia HOM05D005654 ORTHO05D006438 1.4e-18 96.7 132 46.2
Zm00001eb265250 Zea mays HOM05D005654 ORTHO05D006438 1.2e-17 93.6 69 66.7
SEGI_21166 Sequoiadendron giganteum HOM05D005654 ORTHO05D006438 3.5e-17 92.0 112 45.5
EL10Ac9g22080 Beta vulgaris HOM05D005654 ORTHO05D006438 2.3e-16 89.4 174 40.2
FAN20G0529 Fragaria x ananassa HOM05D005654 ORTHO05D006438 2.3e-16 89.4 92 52.2
arahy.Tifrunner.gnm1.ann1.I9PPQ0 Arachis hypogaea HOM05D005654 ORTHO05D006438 3.3e-15 85.5 136 41.2
Rhsim08G0123600 Rhododendron simsii HOM05D005654 ORTHO05D006438 4.1e-13 78.6 89 55.1
Lalb_Chr02g0154671 Lupinus albus HOM05D005654 ORTHO05D006438 2.6e-12 75.9 84 50.0
TWI09G1445 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 1.7e-11 73.2 40 82.5
SHI05467 Sapria himalayana HOM05D005654 ORTHO05D006438 3.2e-10 68.9 64 59.4
Sed0001903 Sechium edule HOM05D005654 ORTHO05D006438 3.2e-10 68.9 40 77.5
SHI03481 Sapria himalayana HOM05D005654 ORTHO05D006438 4.2e-10 68.6 107 42.1
CARHR160590 Cardamine hirsuta HOM05D005654 ORTHO05D006438 1.2e-09 67.0 93 44.1
Zm00001eb093520 Zea mays HOM05D005654 ORTHO05D006438 3.0e-08 62.4 41 68.3
Zm00001eb414250 Zea mays HOM05D005654 ORTHO05D006438 3.0e-08 62.4 41 68.3
Cfa006918 Carpinus fangiana HOM05D005654 ORTHO05D006438 8.7e-08 60.8 41 65.9
Zm00001eb035810 Zea mays HOM05D005654 ORTHO05D006438 1.9e-07 59.7 46 63.0
CARHR160580 Cardamine hirsuta HOM05D005654 ORTHO05D006438 4.3e-07 58.5 41 68.3
Zm00001eb078300 Zea mays HOM05D000349 ORTHO05D010734 6.3e-06 54.7 47 55.3
Zm00001eb309330 Zea mays HOM05D000349 ORTHO05D006438 6.3e-06 54.7 47 55.3


User provided reference genes

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