Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold280G46856 Striga asiatica HOM05D001617 ORTHO05D008611 3.4e-112 408.3 201 100.0
Migut.H02499 Erythranthe guttata HOM05D001617 ORTHO05D008611 5.9e-64 248.1 191 66.0
SalBow8G0576 Salvia bowleyana HOM05D001617 ORTHO05D008611 8.3e-50 201.1 167 62.9
Actinidia22895 Actinidia chinensis HOM05D001617 ORTHO05D008611 1.4e-49 200.3 186 53.8
Dinv40191 Davidia involucrata HOM05D001617 ORTHO05D008611 9.2e-49 197.6 189 52.9
CSS0049801 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 6.0e-48 194.9 185 50.8
Hma1.2p1_0300F.1_g117970 Hydrangea macrophylla HOM05D001617 ORTHO05D008611 1.3e-47 193.7 187 52.9
Cc07_g11900 Coffea canephora HOM05D001617 ORTHO05D008611 3.9e-47 192.2 183 53.6
Actinidia17356 Actinidia chinensis HOM05D001617 ORTHO05D008611 1.5e-46 190.3 183 53.6
Sc07g0001380 Simmondsia chinensis HOM05D001617 ORTHO05D008611 1.9e-46 189.9 186 54.8
CSS0040657 Camellia sinensis var. sinensis HOM05D001617 ORTHO05D008611 7.3e-46 188.0 185 50.3
Solyc02g038814.1 Solanum lycopersicum HOM05D001617 ORTHO05D008611 1.2e-45 187.2 186 52.2
Sopen02g012580 Solanum pennellii HOM05D001617 ORTHO05D008611 1.2e-45 187.2 186 52.2
TAR625G0652 Trochodendron aralioides HOM05D001617 ORTHO05D008611 4.7e-45 185.3 191 52.9
Nn5g30995 Nelumbo nucifera HOM05D001617 ORTHO05D008611 8.0e-45 184.5 182 54.4
Nitab4.5_0001365g0060 Nicotiana tabacum HOM05D001617 ORTHO05D008611 3.1e-44 182.6 191 51.8
Peaxi162Scf00580g00110 Petunia axillaris HOM05D001617 ORTHO05D008611 3.1e-44 182.6 186 52.2
Atru.chr3.130 Acer truncatum HOM05D001617 ORTHO05D008611 2.0e-43 179.9 189 50.3
Aqoxy6G01611 Aquilegia oxysepala HOM05D001617 ORTHO05D008611 2.0e-43 179.9 182 50.5
Rhsim10G0195300 Rhododendron simsii HOM05D001617 ORTHO05D008611 4.4e-43 178.7 188 50.0
MD15G1230700 Malus domestica HOM05D001617 ORTHO05D008611 7.5e-43 177.9 182 54.9
AUR62003746 Chenopodium quinoa HOM05D001617 ORTHO05D008611 1.7e-42 176.8 197 47.7
Manes.03G014200 Manihot esculenta HOM05D001617 ORTHO05D008611 1.7e-42 176.8 180 51.7
Haze_03607 Corylus avellana HOM05D001617 ORTHO05D008611 6.4e-42 174.9 183 51.4
QL06p053003 Quercus lobata HOM05D001617 ORTHO05D008611 1.1e-41 174.1 188 52.1
PGSC0003DMG400017488 Solanum tuberosum HOM05D001617 ORTHO05D008611 1.1e-41 174.1 204 48.0
CsaV3_3G000210 Cucumis sativus L. HOM05D001617 ORTHO05D008611 2.4e-41 172.9 173 50.9
Prupe.7G183400 Prunus persica HOM05D001617 ORTHO05D008611 3.2e-41 172.6 172 55.8
Nitab4.5_0000467g0050 Nicotiana tabacum HOM05D001617 ORTHO05D008611 4.1e-41 172.2 208 47.6
MD02G1114800 Malus domestica HOM05D001617 ORTHO05D008611 7.0e-41 171.4 184 51.1
Potri.018G026700 Populus trichocarpa HOM05D001617 ORTHO05D008611 7.0e-41 171.4 184 48.4
Sabra06G0199600 Salix brachista HOM05D001617 ORTHO05D008611 7.0e-41 171.4 186 48.4
arahy.Tifrunner.gnm1.ann1.00REGV Arachis hypogaea HOM05D001617 ORTHO05D008611 1.2e-40 170.6 184 51.6
arahy.Tifrunner.gnm1.ann1.P3NXZX Arachis hypogaea HOM05D001617 ORTHO05D008611 1.2e-40 170.6 184 51.6
C07p61220 Brassica napus HOM05D001617 ORTHO05D008611 1.2e-40 170.6 190 47.9
BolC7t46548H Brassica oleracea HOM05D001617 ORTHO05D008611 1.2e-40 170.6 190 47.9
Ca_24984_v3 Cicer arietinum L. HOM05D001617 ORTHO05D008611 2.1e-40 169.9 191 50.3
Sed0024019 Sechium edule HOM05D001617 ORTHO05D008611 2.1e-40 169.9 167 50.9
Lalb_Chr05g0214811 Lupinus albus HOM05D001617 ORTHO05D008611 2.7e-40 169.5 184 51.1
Glyma.01G158500 Glycine max HOM05D001617 ORTHO05D008611 4.6e-40 168.7 186 50.0
AL7G15630 Arabidopsis lyrata HOM05D001617 ORTHO05D008611 7.8e-40 167.9 186 48.4
CiPaw.08G181900 Carya illinoinensis HOM05D001617 ORTHO05D008611 7.8e-40 167.9 180 53.3
Glyma.11G086100 Glycine max HOM05D001617 ORTHO05D008611 1.3e-39 167.2 186 50.0
FvH4_1g10271 Fragaria vesca HOM05D001617 ORTHO05D008611 1.7e-39 166.8 189 49.2
Psat4g142640 Pisum sativum HOM05D001617 ORTHO05D008611 1.7e-39 166.8 191 49.2
FAN19G1097 Fragaria x ananassa HOM05D001617 ORTHO05D002495 2.3e-39 166.4 189 48.7
Phvul.002G116800 Phaseolus vulgaris HOM05D001617 ORTHO05D008611 2.3e-39 166.4 186 48.9
TPR.G24692 Trifolium pratense HOM05D001617 ORTHO05D008611 6.6e-39 164.9 191 49.7
AT4G35530 Arabidopsis thaliana HOM05D001617 ORTHO05D008611 1.1e-38 164.1 185 50.3
Carub.0007s0479 Capsella rubella HOM05D001617 ORTHO05D008611 1.1e-38 164.1 181 50.3
Eucgr.I02221 Eucalyptus grandis HOM05D001617 ORTHO05D008611 1.1e-38 164.1 183 51.4
A01p03080 Brassica napus HOM05D001617 ORTHO05D008611 1.5e-38 163.7 190 46.8
Ciclev10026581m.g Citrus clementina HOM05D001617 ORTHO05D008611 1.5e-38 163.7 187 46.5
RcHm_v2.0_Chr2g0097101 Rosa chinensis HOM05D001617 ORTHO05D008611 1.5e-38 163.7 189 48.7
A03p63650 Brassica napus HOM05D001617 ORTHO05D008611 2.5e-38 162.9 184 48.9
BraA03t15436Z Brassica rapa HOM05D001617 ORTHO05D008611 2.5e-38 162.9 184 48.9
PSO210G2591 Papaver somniferum HOM05D001617 ORTHO05D008611 3.3e-38 162.5 192 46.4
BraA01t00292Z Brassica rapa HOM05D001617 ORTHO05D008611 4.3e-38 162.2 190 46.3
PGR119G0287 Punica granatum HOM05D001617 ORTHO05D008611 4.3e-38 162.2 175 46.9
TPR.G27884 Trifolium pratense HOM05D001617 ORTHO05D008611 4.3e-38 162.2 191 47.6
Duzib147G0359 Durio zibethinus HOM05D001617 ORTHO05D008611 7.3e-38 161.4 167 49.1
AUR62002049 Chenopodium quinoa HOM05D001617 ORTHO05D008611 9.5e-38 161.0 197 45.2
Thhalv10026286m.g Eutrema salsugineum HOM05D001617 ORTHO05D008611 9.5e-38 161.0 181 47.0
HanXRQChr03g0061381 Helianthus annuus HOM05D001617 ORTHO05D008611 9.5e-38 161.0 195 45.1
BcaNung03634 Brassica carinata HOM05D001617 ORTHO05D008611 1.6e-37 160.2 181 46.4
Lalb_Chr16g0380051 Lupinus albus HOM05D001617 ORTHO05D008611 2.1e-37 159.8 184 47.8
TWI09G0535 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 2.1e-37 159.8 161 53.4
Aa31LG6G12490 Aethionema arabicum HOM05D001617 ORTHO05D008611 3.6e-37 159.1 179 48.6
THA.LOC104819716 Tarenaya hassleriana HOM05D001617 ORTHO05D008611 3.6e-37 159.1 177 50.3
Medtr7g006210 Medicago truncatula HOM05D001617 ORTHO05D008611 1.1e-36 157.5 179 49.2
Sp7g33310 Schrenkiella parvula HOM05D001617 ORTHO05D008611 1.8e-36 156.8 192 45.8
Thecc.01G005100 Theobroma cacao HOM05D001617 ORTHO05D008611 1.8e-36 156.8 166 48.8
Gohir.A02G178000 Gossypium hirsutum HOM05D001617 ORTHO05D008611 2.3e-36 156.4 179 46.4
Lsat_1_v5_gn_7_41980 Lactuca sativa HOM05D001617 ORTHO05D008611 4.0e-36 155.6 187 44.4
ATR0807G073 Amborella trichopoda HOM05D001617 ORTHO05D008611 5.2e-36 155.2 201 45.3
ECA240G2496 Erigeron canadensis HOM05D001617 ORTHO05D008611 1.2e-35 154.1 181 43.6
Potri.006G255301 Populus trichocarpa HOM05D001617 ORTHO05D008611 1.2e-35 154.1 175 46.9
VMungo1215G1547 Vigna mungo HOM05D004017 ORTHO05D004612 1.5e-35 153.7 171 48.0
PSO761G0409 Papaver somniferum HOM05D001617 ORTHO05D008611 3.4e-35 152.5 197 44.2
Gohir.D03G001800 Gossypium hirsutum HOM05D001617 ORTHO05D008611 4.4e-35 152.1 179 45.8
GSVIVG01013391001 Vitis vinifera HOM05D001617 ORTHO05D008611 1.3e-34 150.6 180 46.7
Gorai.003G002100 Gossypium raimondii HOM05D001617 ORTHO05D008611 1.7e-34 150.2 178 45.5
Lj2g0016890 Lotus japonicus HOM05D001617 ORTHO05D008611 1.7e-34 150.2 186 46.2
CARHR243860 Cardamine hirsuta HOM05D001617 ORTHO05D008611 1.9e-33 146.7 117 58.1
FAN23G1150 Fragaria x ananassa HOM05D001617 ORTHO05D002495 4.1e-33 145.6 225 40.9
HPP92_001135 Vanilla planifolia HOM05D001617 ORTHO05D008611 3.5e-32 142.5 181 46.4
Zm00001eb123330 Zea mays HOM05D001617 ORTHO05D008611 7.8e-32 141.4 185 43.8
Os05g0165400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 3.0e-31 139.4 184 46.2
MELO3C013716.2 Cucumis melo HOM05D001617 ORTHO05D008611 1.1e-30 137.5 89 69.7
ClCG10G000190 Citrullus lanatus HOM05D001617 ORTHO05D008611 1.5e-30 137.1 206 39.3
Lj2g0001157 Lotus japonicus HOM05D001617 ORTHO05D008611 1.6e-29 133.7 104 65.4
TWI73G0916 Tripterygium wilfordii HOM05D001617 ORTHO05D008611 2.8e-29 132.9 158 47.5
Hund03599 Selenicereus undatus HOM05D001617 ORTHO05D008611 1.4e-28 130.6 192 39.6
CANSAT25G0226 Cannabis sativa HOM05D001617 ORTHO05D008611 3.1e-28 129.4 145 47.6
EL10Ac6g15051 Beta vulgaris HOM05D001617 ORTHO05D008611 8.9e-28 127.9 217 40.1
BcaNung00584 Brassica carinata HOM05D001617 ORTHO05D008611 9.9e-27 124.4 193 38.9
CDE05G1602 Ceratophyllum demersum HOM05D001617 ORTHO05D008611 1.3e-26 124.0 168 42.3
Haze_22828 Corylus avellana HOM05D006218 ORTHO05D007338 1.3e-26 124.0 98 60.2
SEGI_30027 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 2.9e-26 122.9 174 40.2
unitig_46.g18791 Utricularia gibba HOM05D001617 ORTHO05D008611 2.9e-26 122.9 184 40.2
Medtr8g446540 Medicago truncatula HOM05D001617 ORTHO05D008611 3.8e-26 122.5 165 43.6
SEGI_12529 Sequoiadendron giganteum HOM05D001617 ORTHO05D008611 4.9e-26 122.1 88 61.4
COL.COLO4_22553 Corchorus olitorius HOM05D001617 ORTHO05D008611 1.6e-24 117.1 83 61.4
Manes.03G014750 Manihot esculenta HOM05D001617 ORTHO05D008611 2.1e-24 116.7 182 42.3
Pp3c25_310 Physcomitrium patens HOM05D001617 ORTHO05D008611 7.8e-24 114.8 110 49.1
FAN26G0309 Fragaria x ananassa HOM05D001617 ORTHO05D002495 1.0e-23 114.4 79 67.1
QL02p015100 Quercus lobata HOM05D001617 ORTHO05D008611 1.0e-23 114.4 165 41.2
AagrBONN_evm.TU.Sc2ySwM_368.1506 Anthoceros agrestis HOM05D001617 ORTHO05D008611 6.6e-23 111.7 107 50.5
TAR381G0965 Trochodendron aralioides HOM05D001617 ORTHO05D008611 9.6e-22 107.8 71 69.0
C01p03430 Brassica napus HOM05D001617 ORTHO05D008611 3.6e-21 105.9 204 34.3
BolC1t00330H Brassica oleracea HOM05D001617 ORTHO05D008611 3.6e-21 105.9 204 34.3
QL02p015033 Quercus lobata HOM05D001617 ORTHO05D008611 6.9e-20 101.7 160 41.2
Os01g0166400 Oryza sativa ssp. japonica HOM05D001617 ORTHO05D008611 9.0e-20 101.3 71 60.6
Mapoly0064s0006 Marchantia polymorpha HOM05D001617 ORTHO05D008611 7.6e-19 98.2 92 47.8
Medtr7g005770 Medicago truncatula HOM05D001617 ORTHO05D008611 2.8e-13 79.7 72 55.6
CBR_g38242 Chara braunii HOM05D001617 ORTHO05D008611 4.0e-12 75.9 88 38.6
SHI18558 Sapria himalayana HOM05D000291 ORTHO05D001358 1.5e-11 73.9 153 35.9
arahy.Tifrunner.gnm1.ann1.JF0LYH Arachis hypogaea HOM05D001617 ORTHO05D008611 2.6e-11 73.2 82 52.4
FAN28G0538 Fragaria x ananassa HOM05D001617 ORTHO05D002495 2.2e-10 70.1 79 48.1


User provided reference genes

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