Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 8.3e-64 247.3 166 100.0
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 1.1e-18 97.4 142 42.3
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 1.4e-18 97.1 142 42.3
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 3.4e-17 92.4 142 46.5
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 2.9e-16 89.4 122 44.3
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 3.8e-16 89.0 142 45.1
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 1.9e-15 86.7 144 39.6
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 1.9e-15 86.7 122 42.6
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 4.2e-15 85.5 142 40.1
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 1.6e-14 83.6 133 39.1
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 2.1e-14 83.2 142 39.4
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 7.9e-14 81.3 34 91.2
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 7.9e-14 81.3 35 91.4
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 7.9e-14 81.3 33 97.0
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 1.4e-13 80.5 35 85.7
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 1.4e-13 80.5 35 85.7
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 1.4e-13 80.5 36 88.9
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 3.0e-13 79.3 35 85.7
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 3.9e-13 79.0 35 88.6
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 5.1e-13 78.6 35 88.6
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 5.1e-13 78.6 35 88.6
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 5.1e-13 78.6 35 88.6
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 5.1e-13 78.6 35 85.7
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 6.7e-13 78.2 33 93.9
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 6.7e-13 78.2 34 88.2
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 6.7e-13 78.2 33 93.9
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 6.7e-13 78.2 33 90.9
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 8.8e-13 77.8 36 88.9
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 8.8e-13 77.8 36 88.9
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 8.8e-13 77.8 33 90.9
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 1.1e-12 77.4 33 93.9
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 1.1e-12 77.4 35 85.7
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 1.1e-12 77.4 33 90.9
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 1.1e-12 77.4 33 90.9
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 1.5e-12 77.0 33 90.9
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 2.0e-12 76.6 31 96.8
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 2.0e-12 76.6 31 96.8
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 2.0e-12 76.6 31 96.8
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 2.0e-12 76.6 31 96.8
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 2.0e-12 76.6 35 85.7
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 2.0e-12 76.6 35 82.9
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 2.5e-12 76.3 116 40.5
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 2.5e-12 76.3 35 85.7
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 2.5e-12 76.3 35 85.7
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 2.5e-12 76.3 33 90.9
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 2.5e-12 76.3 31 93.5
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 2.5e-12 76.3 31 93.5
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 3.3e-12 75.9 35 85.7
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 3.3e-12 75.9 33 87.9
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 3.3e-12 75.9 33 87.9
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 4.3e-12 75.5 31 93.5
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 5.7e-12 75.1 30 96.7
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 5.7e-12 75.1 34 88.2
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 1.3e-11 73.9 36 83.3
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 1.3e-11 73.9 36 86.1
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 1.3e-11 73.9 36 86.1
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 1.3e-11 73.9 36 86.1
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 1.3e-11 73.9 33 87.9
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 1.3e-11 73.9 33 84.8
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 1.3e-11 73.9 31 93.5
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 1.7e-11 73.6 32 90.6
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 1.7e-11 73.6 35 82.9
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 2.2e-11 73.2 126 42.9
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 2.2e-11 73.2 33 84.8
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 2.8e-11 72.8 112 39.3
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 2.8e-11 72.8 112 54.5
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 2.8e-11 72.8 112 54.5
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 2.8e-11 72.8 33 87.9
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 2.8e-11 72.8 31 87.1
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 2.8e-11 72.8 35 80.0
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 2.8e-11 72.8 34 82.4
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 3.7e-11 72.4 30 93.3
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 3.7e-11 72.4 33 84.8
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 4.8e-11 72.0 31 90.3
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 4.8e-11 72.0 29 93.1
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 6.3e-11 71.6 29 93.1
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 8.2e-11 71.2 30 90.0
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 1.1e-10 70.9 31 90.3
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 1.4e-10 70.5 112 44.6
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 1.4e-10 70.5 29 93.1
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 1.4e-10 70.5 29 93.1
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 1.4e-10 70.5 31 87.1
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 1.8e-10 70.1 32 78.1
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 1.8e-10 70.1 31 87.1
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 2.4e-10 69.7 30 90.0
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 2.4e-10 69.7 30 90.0
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 2.4e-10 69.7 33 78.8
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 5.3e-10 68.6 33 81.8
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 6.9e-10 68.2 30 83.3
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 9.1e-10 67.8 33 81.8
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 1.2e-09 67.4 33 78.8
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 2.0e-09 66.6 31 80.6
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 2.0e-09 66.6 33 72.7
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 4.5e-09 65.5 33 75.8
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 5.9e-09 65.1 33 72.7
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 1.0e-08 64.3 30 80.0
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 1.0e-08 64.3 30 80.0
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 1.0e-08 64.3 30 80.0
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 1.3e-08 63.9 30 80.0
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 1.3e-08 63.9 30 80.0
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 1.7e-08 63.5 33 78.8
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 1.1e-07 60.8 31 67.7
Pp3c10_3490 Physcomitrium patens HOM05D007510 ORTHO05D009587 1.6e-06 57.0 34 64.7
AL6G28340 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 7.9e-06 54.7 29 72.4


User provided reference genes

Program Settings