Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold27G11671 Striga asiatica HOM05D009522 ORTHO05D009846 6.1e-203 710.7 378 100.0
Oeu018569.1 Olea europaea HOM05D009522 ORTHO05D009846 4.1e-26 123.2 409 37.7
Rhsim07G0169800 Rhododendron simsii HOM05D033576 ORTHO05D009846 6.4e-19 99.4 430 32.8
Nitab4.5_0010092g0020 Nicotiana tabacum HOM05D009522 ORTHO05D009846 1.2e-17 95.1 444 30.9
Duzib168G1354 Durio zibethinus HOM05D019025 ORTHO05D009846 3.5e-17 93.6 410 30.7
CAN.G566.64 Capsicum annuum HOM05D009522 ORTHO05D009846 7.8e-17 92.4 450 29.8
PGSC0003DMG400029280 Solanum tuberosum HOM05D009522 ORTHO05D009846 1.9e-15 87.8 458 29.7
Nitab4.5_0001159g0190 Nicotiana tabacum HOM05D009522 ORTHO05D009846 4.3e-15 86.7 452 29.4
MSTRG.25778 Avicennia marina HOM05D009522 ORTHO05D009846 1.2e-14 85.1 468 28.8
Solyc12g096400.2 Solanum lycopersicum HOM05D009522 ORTHO05D009846 2.1e-14 84.3 453 30.0
CAN.G908.7 Capsicum annuum HOM05D009522 ORTHO05D009846 4.7e-14 83.2 429 30.1
PGR031G3799 Punica granatum HOM05D009522 ORTHO05D009846 6.9e-13 79.3 425 31.3
Sabra18G0011200 Salix brachista HOM05D014278 ORTHO05D009846 9.9e-12 75.5 450 31.1
Cc00_g05330 Coffea canephora HOM05D009522 ORTHO05D009846 1.7e-11 74.7 435 31.5
Sabra18G0013600 Salix brachista HOM05D014278 ORTHO05D009846 2.9e-11 73.9 450 30.9
Migut.A00437 Erythranthe guttata HOM05D009522 ORTHO05D009846 4.9e-11 73.2 584 26.9
unitig_32.g10944 Utricularia gibba HOM05D009522 ORTHO05D009846 4.9e-11 73.2 414 29.5
Peaxi162Scf00459g00082 Petunia axillaris HOM05D009522 ORTHO05D009846 1.1e-10 72.0 488 29.7
Potri.006G274600 Populus trichocarpa HOM05D014278 ORTHO05D009846 1.4e-10 71.6 431 29.2
Potri.018G005500 Populus trichocarpa HOM05D014278 ORTHO05D009846 1.4e-10 71.6 449 29.4
PGSC0003DMG400029579 Solanum tuberosum HOM05D009522 ORTHO05D009846 2.4e-10 70.9 433 31.9
CAN.G673.17 Capsicum annuum HOM05D017514 ORTHO05D009846 3.2e-10 70.5 49 75.5
Sopen08g002390 Solanum pennellii HOM05D017514 ORTHO05D009846 3.2e-10 70.5 45 88.9
PGSC0003DMG400026295 Solanum tuberosum HOM05D017514 ORTHO05D009846 3.2e-10 70.5 45 88.9
Duzib187G1602 Durio zibethinus HOM05D019025 ORTHO05D009846 2.7e-09 67.4 418 28.9
MSTRG.11810 Avicennia marina HOM05D009522 ORTHO05D009846 3.5e-09 67.0 144 40.3
Migut.E01423 Erythranthe guttata HOM05D009522 ORTHO05D009846 3.5e-09 67.0 46 78.3
Peaxi162Scf00288g00084 Petunia axillaris HOM05D009522 ORTHO05D009846 6.0e-09 66.2 409 29.8
MSTRG.1612 Avicennia marina HOM05D036756 ORTHO05D009846 1.3e-08 65.1 422 30.6
Oeu040384.1 Olea europaea HOM05D009522 ORTHO05D009846 1.3e-08 65.1 288 29.9
Sopen12g032250 Solanum pennellii HOM05D009522 ORTHO05D009846 1.3e-08 65.1 460 28.3
BcaC06g33168 Brassica carinata HOM05D009040 ORTHO05D002235 1.7e-08 64.7 63 61.9
Lj8P444T9 Lonicera japonica HOM05D009522 ORTHO05D009846 2.3e-08 64.3 114 38.6
Sopen08g022670 Solanum pennellii HOM05D009522 ORTHO05D009846 2.3e-08 64.3 426 29.6
ATR0564G160 Amborella trichopoda HOM05D003021 ORTHO05D002235 5.1e-08 63.2 74 54.1
Lj8P473T2 Lonicera japonica HOM05D031498 ORTHO05D016335 5.1e-08 63.2 114 38.6
CANSAT64G0795 Cannabis sativa HOM05D003021 ORTHO05D002235 8.7e-08 62.4 47 74.5
BcaC06g32508 Brassica carinata HOM05D009040 ORTHO05D002235 1.1e-07 62.0 70 55.7
BcaC06g32509 Brassica carinata HOM05D009040 ORTHO05D002235 1.1e-07 62.0 70 55.7
Duzib187G0754 Durio zibethinus HOM05D003021 ORTHO05D002235 1.5e-07 61.6 47 76.6
SalBow8G0117 Salvia bowleyana HOM05D036756 ORTHO05D009846 1.5e-07 61.6 212 33.0
Carub.0008s2194 Capsella rubella HOM05D009040 ORTHO05D002235 1.9e-07 61.2 68 58.8
AUR62042563 Chenopodium quinoa HOM05D003021 ORTHO05D002235 1.9e-07 61.2 76 55.3
ClCG11G004640 Citrullus lanatus HOM05D003021 ORTHO05D002235 1.9e-07 61.2 47 74.5
MELO3C022022.2 Cucumis melo HOM05D003021 ORTHO05D002235 1.9e-07 61.2 47 74.5
CsaV3_5G038410 Cucumis sativus L. HOM05D003021 ORTHO05D002235 1.9e-07 61.2 47 74.5
SalBow8G1342 Salvia bowleyana HOM05D036756 ORTHO05D009846 1.9e-07 61.2 211 33.2
Sed0005734 Sechium edule HOM05D003021 ORTHO05D002235 1.9e-07 61.2 47 74.5
SGA_v2.0_scaffold121G33031 Striga asiatica HOM05D009522 ORTHO05D009846 1.9e-07 61.2 43 72.1
CSS0009627 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 3.3e-07 60.5 47 72.3
CSS0042635 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 3.3e-07 60.5 47 72.3
Duzib147G0806 Durio zibethinus HOM05D003021 ORTHO05D002235 3.3e-07 60.5 47 74.5
Nitab4.5_0002023g0020 Nicotiana tabacum HOM05D009522 ORTHO05D009846 3.3e-07 60.5 434 29.5
Oeu000639.1 Olea europaea HOM05D003021 ORTHO05D002235 3.3e-07 60.5 46 69.6
Rhsim08G0073600 Rhododendron simsii HOM05D003021 ORTHO05D002235 3.3e-07 60.5 47 72.3
CiPaw.07G212500 Carya illinoinensis HOM05D013263 ORTHO05D009846 4.3e-07 60.1 383 30.3
Potri.017G090200 Populus trichocarpa HOM05D003021 ORTHO05D002235 4.3e-07 60.1 67 56.7
TWI60G1604 Tripterygium wilfordii HOM05D003021 ORTHO05D002235 4.3e-07 60.1 47 72.3
CARHR205360 Cardamine hirsuta HOM05D009040 ORTHO05D002235 5.6e-07 59.7 113 45.1
CiPaw.04G058300 Carya illinoinensis HOM05D003021 ORTHO05D002235 5.6e-07 59.7 47 70.2
Ciclev10011360m.g Citrus clementina HOM05D003021 ORTHO05D002235 5.6e-07 59.7 47 72.3
COL.COLO4_21376 Corchorus olitorius HOM05D003021 ORTHO05D002235 5.6e-07 59.7 67 59.7
PSO170G4909 Papaver somniferum HOM05D021794 ORTHO05D016335 5.6e-07 59.7 213 32.9
Thecc.04G090900 Theobroma cacao HOM05D003021 ORTHO05D002235 5.6e-07 59.7 47 72.3
TAR371G0449 Trochodendron aralioides HOM05D003021 ORTHO05D002235 5.6e-07 59.7 75 54.7
C09p69010 Brassica napus HOM05D009040 ORTHO05D002235 7.3e-07 59.3 56 60.7
BolC9t59646H Brassica oleracea HOM05D009040 ORTHO05D002235 7.3e-07 59.3 56 60.7
FAN13G0757 Fragaria x ananassa HOM05D003021 ORTHO05D002235 7.3e-07 59.3 47 72.3
Gohir.D04G045100 Gossypium hirsutum HOM05D003021 ORTHO05D002235 7.3e-07 59.3 76 56.6
Gorai.012G050300 Gossypium raimondii HOM05D003021 ORTHO05D002235 7.3e-07 59.3 76 56.6
arahy.Tifrunner.gnm1.ann1.MP0IU4 Arachis hypogaea HOM05D003021 ORTHO05D002235 9.6e-07 58.9 66 53.0
arahy.Tifrunner.gnm1.ann1.Y4RXEQ Arachis hypogaea HOM05D003021 ORTHO05D002235 9.6e-07 58.9 66 53.0
Haze_21737 Corylus avellana HOM05D014278 ORTHO05D009846 9.6e-07 58.9 38 81.6
Thhalv10013233m.g Eutrema salsugineum HOM05D009040 ORTHO05D002235 9.6e-07 58.9 81 50.6
Gohir.A05G370400 Gossypium hirsutum HOM05D003021 ORTHO05D002235 9.6e-07 58.9 76 56.6
MD14G1207900 Malus domestica HOM05D003021 ORTHO05D002235 9.6e-07 58.9 47 68.1
QL02p039488 Quercus lobata HOM05D003021 ORTHO05D002235 9.6e-07 58.9 47 70.2
Sabra17G0079400 Salix brachista HOM05D003021 ORTHO05D002235 9.6e-07 58.9 67 55.2
Sopen03g034540 Solanum pennellii HOM05D003021 ORTHO05D022173 9.6e-07 58.9 45 68.9
AUR62018150 Chenopodium quinoa HOM05D003021 ORTHO05D002235 1.3e-06 58.5 76 51.3
Cc07_g03910 Coffea canephora HOM05D003021 ORTHO05D002235 1.3e-06 58.5 47 68.1
Dinv11486 Davidia involucrata HOM05D003021 ORTHO05D002235 1.3e-06 58.5 47 70.2
ECA240G3142 Erigeron canadensis HOM05D009522 ORTHO05D009846 1.3e-06 58.5 63 57.1
Eucgr.B00563 Eucalyptus grandis HOM05D003021 ORTHO05D002235 1.3e-06 58.5 36 83.3
Lalb_Chr06g0175101 Lupinus albus HOM05D003021 ORTHO05D002235 1.3e-06 58.5 36 83.3
Manes.01G099000 Manihot esculenta HOM05D003021 ORTHO05D002235 1.3e-06 58.5 47 70.2
Nitab4.5_0000555g0230 Nicotiana tabacum HOM05D017514 ORTHO05D009846 1.3e-06 58.5 209 34.0
Oeu000855.1 Olea europaea HOM05D003021 ORTHO05D002235 1.3e-06 58.5 45 73.3
ECA232G0555 Erigeron canadensis HOM05D003021 ORTHO05D002235 1.6e-06 58.2 46 73.9
FAN08G3689 Fragaria x ananassa HOM05D003021 ORTHO05D002235 1.6e-06 58.2 47 70.2
Lj9P468T32 Lonicera japonica HOM05D003021 ORTHO05D002235 1.6e-06 58.2 36 83.3
Medtr4g109220 Medicago truncatula HOM05D014856 ORTHO05D002235 1.6e-06 58.2 128 41.4
RcHm_v2.0_Chr7g0182331 Rosa chinensis HOM05D003021 ORTHO05D002235 1.6e-06 58.2 47 70.2
Solyc02g088580.1 Solanum lycopersicum HOM05D003021 ORTHO05D002235 1.6e-06 58.2 45 73.3
Sopen02g033310 Solanum pennellii HOM05D003021 ORTHO05D002235 1.6e-06 58.2 45 73.3
Actinidia09241 Actinidia chinensis HOM05D003021 ORTHO05D002235 2.1e-06 57.8 47 68.1
Aqoxy3G03562 Aquilegia oxysepala HOM05D003021 ORTHO05D002235 2.1e-06 57.8 47 68.1
CSS0009260 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 2.1e-06 57.8 36 83.3
CAN.G479.38 Capsicum annuum HOM05D003021 ORTHO05D022173 2.1e-06 57.8 43 72.1
Dinv21138 Davidia involucrata HOM05D003021 ORTHO05D009846 2.1e-06 57.8 95 43.2
MBI14_g19445_MAGBIO Magnolia biondii HOM05D021794 ORTHO05D009846 2.1e-06 57.8 412 30.1
SalBow1G6367 Salvia bowleyana HOM05D003021 ORTHO05D002235 2.1e-06 57.8 47 70.2
Atru.chr8.382 Acer truncatum HOM05D003021 ORTHO05D002235 2.8e-06 57.4 80 50.0
Aa31LG9G16610 Aethionema arabicum HOM05D003021 ORTHO05D002235 2.8e-06 57.4 46 67.4
AL7G50940 Arabidopsis lyrata HOM05D003021 ORTHO05D002235 2.8e-06 57.4 62 59.7
AT5G39380 Arabidopsis thaliana HOM05D003021 ORTHO05D002235 2.8e-06 57.4 62 59.7
CANSAT80G0381 Cannabis sativa HOM05D003021 ORTHO05D002235 2.8e-06 57.4 43 74.4
Dinv10680 Davidia involucrata HOM05D003021 ORTHO05D002235 2.8e-06 57.4 98 43.9
Sp7g02590 Schrenkiella parvula HOM05D003021 ORTHO05D002235 2.8e-06 57.4 89 44.9
BcaB06g27294 Brassica carinata HOM05D003021 ORTHO05D002235 3.6e-06 57.0 46 69.6
C04p45710 Brassica napus HOM05D003021 ORTHO05D002235 3.6e-06 57.0 46 69.6
BolC4t26155H Brassica oleracea HOM05D003021 ORTHO05D002235 3.6e-06 57.0 46 69.6
CiPaw.03G091400 Carya illinoinensis HOM05D003021 ORTHO05D002235 3.6e-06 57.0 45 71.1
COL.COLO4_19033 Corchorus olitorius HOM05D019025 ORTHO05D009846 3.6e-06 57.0 436 28.9
HanXRQChr15g0488721 Helianthus annuus HOM05D003021 ORTHO05D002235 3.6e-06 57.0 74 52.7
Lalb_Chr22g0361231 Lupinus albus HOM05D041085 ORTHO05D012811 3.6e-06 57.0 51 62.7
Nn3g17378 Nelumbo nucifera HOM05D003021 ORTHO05D002235 3.6e-06 57.0 81 51.9
Nitab4.5_0001211g0040 Nicotiana tabacum HOM05D003021 ORTHO05D022173 3.6e-06 57.0 36 75.0
Peaxi162Scf00274g00005 Petunia axillaris HOM05D003021 ORTHO05D022173 3.6e-06 57.0 36 75.0
PGR083G2506 Punica granatum HOM05D003021 ORTHO05D002235 3.6e-06 57.0 75 54.7
HPP92_015800 Vanilla planifolia HOM05D031498 ORTHO05D016335 3.6e-06 57.0 43 67.4
HPP92_015807 Vanilla planifolia HOM05D031498 ORTHO05D016335 3.6e-06 57.0 43 67.4
VMungo0464G0637 Vigna mungo HOM05D003021 ORTHO05D002235 3.6e-06 57.0 36 80.6
MSTRG.23902 Avicennia marina HOM05D003021 ORTHO05D002235 4.8e-06 56.6 36 80.6
BolC3t12928H Brassica oleracea HOM05D009040 ORTHO05D002235 4.8e-06 56.6 99 43.4
Carub.0007s3655 Capsella rubella HOM05D003021 ORTHO05D002235 4.8e-06 56.6 62 58.1
Dinv38770 Davidia involucrata HOM05D003021 ORTHO05D002235 4.8e-06 56.6 56 58.9
Migut.K01293 Erythranthe guttata HOM05D003021 ORTHO05D002235 4.8e-06 56.6 47 68.1
Thhalv10027728m.g Eutrema salsugineum HOM05D003021 ORTHO05D002235 4.8e-06 56.6 64 56.2
Phvul.004G033600 Phaseolus vulgaris HOM05D003021 ORTHO05D002235 4.8e-06 56.6 47 68.1
Ah.02g113870 Amaranthus hybridus HOM05D003021 ORTHO05D002235 6.2e-06 56.2 47 63.8
arahy.Tifrunner.gnm1.ann1.JN5ZJX Arachis hypogaea HOM05D003021 ORTHO05D002235 6.2e-06 56.2 47 68.1
A04p12060 Brassica napus HOM05D003021 ORTHO05D002235 6.2e-06 56.2 36 80.6
BraA04t16870Z Brassica rapa HOM05D003021 ORTHO05D002235 6.2e-06 56.2 36 80.6
CAN.G206.199 Capsicum annuum HOM05D003021 ORTHO05D002235 6.2e-06 56.2 45 71.1
Lj1g0014126 Lotus japonicus HOM05D003021 ORTHO05D002235 6.2e-06 56.2 47 66.0
Oeu062145.1 Olea europaea HOM05D003021 ORTHO05D002235 6.2e-06 56.2 66 54.5
Potri.012G067100 Populus trichocarpa HOM05D003021 ORTHO05D002235 6.2e-06 56.2 116 40.5
PGSC0003DMG400024656 Solanum tuberosum HOM05D003021 ORTHO05D022173 6.2e-06 56.2 43 69.8
THA.LOC104822343 Tarenaya hassleriana HOM05D009950 ORTHO05D002235 6.2e-06 56.2 36 80.6
CSS0009655 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 8.1e-06 55.8 45 68.9
Ca_15666_v3 Cicer arietinum L. HOM05D013197 ORTHO05D009846 8.1e-06 55.8 334 26.9
FvH4_5g14370 Fragaria vesca HOM05D003021 ORTHO05D002235 8.1e-06 55.8 47 68.1
Nitab4.5_0008213g0010 Nicotiana tabacum HOM05D003021 ORTHO05D002235 8.1e-06 55.8 45 71.1
PSO063G5953 Papaver somniferum HOM05D021794 ORTHO05D016335 8.1e-06 55.8 470 27.7
Peaxi162Scf00166g00071 Petunia axillaris HOM05D003021 ORTHO05D002235 8.1e-06 55.8 45 71.1
Sp2g24490 Schrenkiella parvula HOM05D009040 ORTHO05D002235 8.1e-06 55.8 99 44.4


User provided reference genes

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