Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 1.9e-150 535.8 265 100.0
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 6.6e-71 271.6 262 56.5
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 8.1e-69 264.6 265 54.3
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 2.8e-61 239.6 266 50.0
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 2.8e-61 239.6 266 50.0
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 2.6e-59 233.0 265 50.6
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 4.4e-59 232.3 265 50.6
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 7.6e-59 231.5 265 49.8
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 6.4e-58 228.4 237 53.6
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 1.1e-57 227.6 246 51.6
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 2.4e-57 226.5 246 51.6
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 7.1e-57 224.9 257 47.5
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 1.6e-56 223.8 268 47.4
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 2.1e-56 223.4 252 50.0
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 4.6e-56 222.2 248 48.0
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 6.0e-56 221.9 256 48.4
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 7.8e-56 221.5 266 47.0
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 7.8e-56 221.5 269 46.5
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 1.3e-55 220.7 258 47.7
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 5.1e-55 218.8 256 46.1
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 1.1e-54 217.6 262 46.6
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 1.1e-54 217.6 248 47.2
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 1.5e-54 217.2 261 46.7
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 1.9e-54 216.9 265 46.4
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 2.5e-54 216.5 253 46.2
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 2.5e-54 216.5 250 47.6
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 5.6e-54 215.3 265 45.7
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 7.3e-54 214.9 258 45.7
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 7.3e-54 214.9 248 48.4
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 9.6e-54 214.5 265 45.7
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 1.3e-53 214.2 241 51.0
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 1.6e-53 213.8 260 44.2
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 1.6e-53 213.8 265 44.5
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 2.1e-53 213.4 265 44.9
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 3.6e-53 212.6 250 46.0
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 8.1e-53 211.5 269 45.0
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 1.8e-52 210.3 260 43.8
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 2.4e-52 209.9 260 44.2
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 2.4e-52 209.9 252 46.0
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 4.0e-52 209.1 256 46.9
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 2.0e-51 206.8 252 45.6
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 2.6e-51 206.5 264 43.2
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 3.4e-51 206.1 255 46.7
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 3.4e-51 206.1 255 45.5
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 3.4e-51 206.1 248 46.8
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 3.4e-51 206.1 260 43.1
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 4.4e-51 205.7 259 46.7
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 4.4e-51 205.7 255 46.7
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 5.8e-51 205.3 259 45.9
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 7.6e-51 204.9 268 43.7
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 7.6e-51 204.9 255 45.9
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 7.6e-51 204.9 268 44.8
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 9.9e-51 204.5 259 45.9
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 9.9e-51 204.5 259 45.9
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 1.7e-50 203.8 258 43.0
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 1.7e-50 203.8 257 45.5
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 1.7e-50 203.8 234 50.0
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 2.2e-50 203.4 264 43.9
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 3.8e-50 202.6 268 43.7
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 1.9e-49 200.3 244 45.5
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 3.2e-49 199.5 244 46.3
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 1.6e-48 197.2 249 43.4
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 6.0e-48 195.3 244 44.7
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 2.3e-47 193.4 254 43.3
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 3.0e-47 193.0 267 43.4
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 5.6e-46 188.7 237 46.4
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 5.6e-46 188.7 239 44.4
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 1.3e-45 187.6 239 44.8
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 2.1e-45 186.8 247 44.9
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 2.1e-45 186.8 237 46.0
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 3.6e-45 186.0 237 43.9
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 4.8e-45 185.7 237 43.0
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 1.1e-44 184.5 250 42.4
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 5.3e-44 182.2 231 44.2
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 9.0e-44 181.4 260 42.7
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 1.4e-41 174.1 238 42.9
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 7.1e-41 171.8 255 40.4
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 1.2e-40 171.0 238 43.3
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 1.3e-39 167.5 262 39.3
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 2.3e-39 166.8 217 43.8
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 5.1e-39 165.6 246 38.6
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 2.4e-36 156.8 204 45.6
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 4.5e-35 152.5 240 34.2
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 7.6e-35 151.8 249 37.3
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 1.3e-34 151.0 240 38.8
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 4.9e-34 149.1 114 66.7
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 2.5e-33 146.7 217 41.5
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 9.3e-33 144.8 115 66.1
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 2.1e-32 143.7 237 36.3
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 2.1e-32 143.7 114 64.9
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 4.6e-32 142.5 201 42.3
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 5.1e-31 139.0 235 34.5
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 9.6e-30 134.8 126 54.0
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 1.3e-29 134.4 237 34.2
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 3.7e-29 132.9 198 38.9
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 6.2e-29 132.1 252 35.7
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 1.8e-28 130.6 105 63.8
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 9.0e-28 128.3 181 40.3
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 2.0e-27 127.1 169 42.6
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 2.0e-27 127.1 207 35.3
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 2.0e-27 127.1 211 36.0
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 3.8e-26 122.9 191 39.8
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 5.0e-26 122.5 177 40.1
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 2.5e-25 120.2 241 34.0
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 7.1e-25 118.6 244 30.7
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 9.3e-25 118.2 171 39.8
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 1.8e-23 114.0 190 37.4
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 1.1e-22 111.3 92 64.1
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 5.9e-19 99.0 167 37.1
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 5.0e-18 95.9 72 61.1
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 8.5e-18 95.1 104 52.9
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 3.2e-17 93.2 65 61.5
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 1.4e-15 87.8 128 42.2
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 7.4e-14 82.0 49 75.5
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 9.7e-14 81.6 73 53.4
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 8.5e-10 68.6 49 61.2
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.4e-07 61.2 120 25.0
AT5G10605 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 3.9e-07 59.7 50 58.0


User provided reference genes

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