Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold27G11630 Striga asiatica HOM05D020655 ORTHO05D010664 7.9e-169 597.0 307 100.0
SGA_v2.0_scaffold68G22816 Striga asiatica HOM05D020655 ORTHO05D010664 6.8e-136 487.6 266 90.2
SGA_v2.0_scaffold121G33122 Striga asiatica HOM05D020655 ORTHO05D010664 1.5e-130 469.9 266 89.1
SGA_v2.0_scaffold6G03301 Striga asiatica HOM05D020655 ORTHO05D010664 1.7e-57 227.3 251 45.8
SGA_v2.0_scaffold53G19330 Striga asiatica HOM05D020655 ORTHO05D010664 9.8e-18 95.1 158 35.4
SalBow5G2449 Salvia bowleyana HOM05D006352 ORTHO05D009628 6.6e-14 82.4 138 34.1
SalBow1G8730 Salvia bowleyana HOM05D006352 ORTHO05D009628 1.6e-12 77.8 154 31.8
SalBow7G1202 Salvia bowleyana HOM05D006352 ORTHO05D009628 2.8e-12 77.0 152 31.6
SalBow1G6783 Salvia bowleyana HOM05D006352 ORTHO05D009628 8.0e-12 75.5 128 31.2
SGA_v2.0_scaffold59G20704 Striga asiatica HOM05D020655 ORTHO05D010664 8.0e-12 75.5 120 37.5
SalBow6G1277 Salvia bowleyana HOM05D006352 ORTHO05D009628 1.4e-11 74.7 132 31.1
SalBow5G3278 Salvia bowleyana HOM05D006352 ORTHO05D009628 1.8e-11 74.3 132 31.1
SalBow8G5426 Salvia bowleyana HOM05D006352 ORTHO05D009628 3.1e-11 73.6 155 32.3
SGA_v2.0_scaffold158G37467 Striga asiatica HOM05D008771 ORTHO05D010664 4.0e-11 73.2 163 27.0
SalBow8G0591 Salvia bowleyana HOM05D006352 ORTHO05D009628 8.9e-11 72.0 148 29.7
SalBow6G2025 Salvia bowleyana HOM05D006352 ORTHO05D009628 1.5e-10 71.2 132 30.3
SGA_v2.0_scaffold25G11032 Striga asiatica HOM05D018612 ORTHO05D011912 4.4e-10 69.7 125 32.8
SGA_v2.0_scaffold195G40830 Striga asiatica HOM05D008771 ORTHO05D010664 2.9e-09 67.0 130 27.7
SalBow1G0640 Salvia bowleyana HOM05D006352 ORTHO05D009628 3.7e-09 66.6 151 27.8
SGA_v2.0_scaffold103G30055 Striga asiatica HOM05D008771 ORTHO05D010664 3.7e-09 66.6 130 27.7
SalBow7G0972 Salvia bowleyana HOM05D006352 ORTHO05D009628 4.9e-09 66.2 144 27.8
SGA_v2.0_scaffold58G20337 Striga asiatica HOM05D008771 ORTHO05D010664 6.4e-09 65.9 132 29.5
SalBow4G2963 Salvia bowleyana HOM05D006352 ORTHO05D009628 8.3e-09 65.5 123 31.7
SGA_v2.0_scaffold57G20169 Striga asiatica HOM05D008771 ORTHO05D010664 1.1e-08 65.1 128 26.6
SalBow3G2741 Salvia bowleyana HOM05D006352 ORTHO05D009628 1.4e-08 64.7 105 33.3
SGA_v2.0_scaffold21G09366 Striga asiatica HOM05D008771 ORTHO05D010664 1.9e-08 64.3 129 29.5
SalBow1G1360 Salvia bowleyana HOM05D006352 ORTHO05D009628 2.4e-08 63.9 144 27.1
SalBow6G5517 Salvia bowleyana HOM05D006352 ORTHO05D009628 2.4e-08 63.9 144 27.1
SalBow1G7197 Salvia bowleyana HOM05D006352 ORTHO05D009628 7.0e-08 62.4 156 25.0
HanXRQChr12g0355561 Helianthus annuus HOM05D005504 ORTHO05D002688 9.2e-08 62.0 123 26.0
SalBow1G7055 Salvia bowleyana HOM05D006352 ORTHO05D009628 1.2e-07 61.6 156 27.6
SalBow8G2553 Salvia bowleyana HOM05D021123 ORTHO05D012387 1.2e-07 61.6 134 26.9
SalBow2G0017 Salvia bowleyana HOM05D021123 ORTHO05D012387 1.6e-07 61.2 134 26.1
SGA_v2.0_scaffold105G30386 Striga asiatica HOM05D008771 ORTHO05D010664 1.6e-07 61.2 118 27.1
SGA_v2.0_scaffold3G01635 Striga asiatica HOM05D008771 ORTHO05D010664 1.6e-07 61.2 118 27.1
SalBow6G4390 Salvia bowleyana HOM05D006352 ORTHO05D009628 2.0e-07 60.8 138 28.3
SalBow5G4176 Salvia bowleyana HOM05D006352 ORTHO05D009628 3.5e-07 60.1 156 26.9
TWI12G0103 Tripterygium wilfordii HOM05D000665 ORTHO05D000140 3.5e-07 60.1 107 31.8
SalBow5G5529 Salvia bowleyana HOM05D006352 ORTHO05D009628 4.6e-07 59.7 150 26.7
SGA_v2.0_scaffold16G07756 Striga asiatica HOM05D008771 ORTHO05D010664 6.0e-07 59.3 185 24.3
SalBow7G1700 Salvia bowleyana HOM05D006352 ORTHO05D009628 1.3e-06 58.2 162 25.3
arahy.Tifrunner.gnm1.ann1.C19S8A Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-06 57.8 123 28.5
arahy.Tifrunner.gnm1.ann1.GG48NL Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-06 57.8 123 28.5
SalBow1G1814 Salvia bowleyana HOM05D006352 ORTHO05D009628 1.7e-06 57.8 162 25.3
SGA_v2.0_scaffold235G43662 Striga asiatica HOM05D008771 ORTHO05D010664 1.7e-06 57.8 130 23.1
SGA_v2.0_scaffold17G08150 Striga asiatica HOM05D008771 ORTHO05D010664 2.3e-06 57.4 135 27.4
SalBow4G0885 Salvia bowleyana HOM05D006352 ORTHO05D009628 3.0e-06 57.0 132 30.3
SGA_v2.0_scaffold6G03413 Striga asiatica HOM05D008771 ORTHO05D010664 3.9e-06 56.6 158 29.1
Gohir.A10G191100 Gossypium hirsutum HOM05D007780 ORTHO05D000140 5.0e-06 56.2 117 29.1
SalBow2G0056 Salvia bowleyana HOM05D006352 ORTHO05D009628 5.0e-06 56.2 148 23.6
SalBow5G4013 Salvia bowleyana HOM05D006352 ORTHO05D009628 5.0e-06 56.2 110 28.2
arahy.Tifrunner.gnm1.ann1.0J418G Arachis hypogaea HOM05D000034 ORTHO05D002688 6.6e-06 55.8 123 27.6
Gohir.D10G198800 Gossypium hirsutum HOM05D007780 ORTHO05D000140 6.6e-06 55.8 117 29.1
Gorai.011G222700 Gossypium raimondii HOM05D007780 ORTHO05D000140 6.6e-06 55.8 117 29.1
Rhsim01G0122400 Rhododendron simsii HOM05D007780 ORTHO05D000140 6.6e-06 55.8 119 26.1
SalBow4G3305 Salvia bowleyana HOM05D006352 ORTHO05D009628 6.6e-06 55.8 189 23.8
arahy.Tifrunner.gnm1.ann1.A110NB Arachis hypogaea HOM05D000034 ORTHO05D002688 8.6e-06 55.5 123 27.6


User provided reference genes

Program Settings