Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 2.7e-77 292.0 150 100.0
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 9.9e-64 246.9 150 83.3
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 3.5e-61 238.4 150 81.3
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 6.2e-58 227.6 150 76.7
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 9.2e-54 213.8 149 71.8
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 1.6e-53 213.0 149 71.1
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 2.1e-53 212.6 150 70.0
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 3.5e-53 211.8 149 72.5
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 4.6e-53 211.5 149 71.1
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 1.7e-52 209.5 150 68.0
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 1.7e-52 209.5 145 69.7
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 3.0e-52 208.8 149 70.5
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 5.1e-52 208.0 151 66.9
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 8.6e-52 207.2 147 69.4
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 3.3e-51 205.3 149 67.8
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 4.3e-51 204.9 150 68.0
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 5.6e-51 204.5 148 67.6
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 1.2e-50 203.4 149 67.8
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 3.6e-50 201.8 151 67.5
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 4.7e-50 201.4 145 68.3
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 2.4e-49 199.1 145 66.2
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 3.1e-49 198.7 146 67.8
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 5.2e-49 198.0 149 66.4
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 6.9e-49 197.6 146 64.4
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 9.0e-49 197.2 148 64.9
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 3.4e-48 195.3 150 62.0
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 3.4e-48 195.3 149 65.8
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 4.4e-48 194.9 149 66.4
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 4.4e-48 194.9 146 66.4
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 7.6e-48 194.1 150 66.0
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 1.7e-47 193.0 149 63.1
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 2.9e-47 192.2 150 62.0
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 4.9e-47 191.4 148 64.2
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 4.9e-47 191.4 150 63.3
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 6.4e-47 191.0 150 66.7
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 8.4e-47 190.7 146 63.7
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 8.4e-47 190.7 150 65.3
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 1.4e-46 189.9 145 65.5
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 2.4e-46 189.1 149 64.4
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 5.4e-46 188.0 149 59.1
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 7.1e-46 187.6 150 65.3
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 7.1e-46 187.6 150 60.7
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 1.2e-45 186.8 150 60.7
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 1.6e-45 186.4 150 60.7
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 6.0e-45 184.5 150 57.3
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 6.0e-45 184.5 159 59.1
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 2.3e-44 182.6 148 60.8
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 2.3e-44 182.6 151 56.3
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 2.3e-44 182.6 172 57.0
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 3.0e-44 182.2 150 62.0
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 3.0e-44 182.2 149 58.4
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 5.1e-44 181.4 149 59.7
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 5.1e-44 181.4 149 59.7
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 5.1e-44 181.4 149 59.7
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 6.6e-44 181.0 168 57.1
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 1.1e-43 180.3 150 63.3
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 1.1e-43 180.3 123 68.3
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 3.3e-43 178.7 151 58.9
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 5.6e-43 177.9 135 62.2
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 7.3e-43 177.6 122 68.0
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 1.3e-42 176.8 148 59.5
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 1.3e-42 176.8 127 66.9
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 2.1e-42 176.0 151 59.6
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 2.8e-42 175.6 146 60.3
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 2.8e-42 175.6 172 55.2
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 3.6e-42 175.3 146 58.2
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 4.8e-42 174.9 148 57.4
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 4.0e-41 171.8 149 57.0
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 4.0e-41 171.8 149 57.7
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 6.9e-41 171.0 148 58.8
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 6.9e-41 171.0 178 53.4
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 6.9e-41 171.0 152 57.9
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 1.5e-40 169.9 149 55.7
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 2.0e-40 169.5 111 73.9
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 3.4e-40 168.7 123 65.9
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 4.5e-40 168.3 144 56.9
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 7.6e-40 167.5 125 60.8
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 1.3e-39 166.8 149 56.4
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 2.2e-39 166.0 148 56.8
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 2.2e-39 166.0 147 55.1
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 2.9e-39 165.6 149 56.4
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 2.9e-39 165.6 150 56.7
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 3.2e-38 162.2 147 56.5
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 3.2e-38 162.2 147 56.5
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 3.2e-38 162.2 124 59.7
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 2.1e-37 159.5 113 66.4
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 7.9e-37 157.5 125 60.0
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 5.6e-35 151.4 150 54.0
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 7.4e-35 151.0 126 60.3
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 1.4e-33 146.7 115 60.0
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 4.0e-33 145.2 112 59.8
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 4.0e-33 145.2 115 63.5
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 4.9e-31 138.3 124 57.3
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 6.4e-31 137.9 112 58.9
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 1.1e-30 137.1 111 58.6
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 2.4e-30 136.0 151 48.3
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 1.8e-28 129.8 116 56.0
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 4.8e-26 121.7 135 48.9
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 8.2e-26 120.9 144 43.1
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 8.2e-26 120.9 146 43.8
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 4.5e-24 115.2 81 76.5
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 1.0e-23 114.0 127 45.7
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 3.2e-22 109.0 117 45.3
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 4.2e-22 108.6 84 61.9
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 2.7e-21 105.9 80 66.2
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 4.6e-21 105.1 142 38.0
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 1.0e-20 104.0 87 56.3
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 8.7e-20 100.9 71 64.8
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 1.1e-19 100.5 71 67.6
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 1.9e-19 99.8 70 64.3
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 1.4e-17 93.6 69 62.3
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 6.9e-17 91.3 69 63.8
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 3.6e-13 79.0 98 40.8
CAN.G285.15 Capsicum annuum HOM05D006886 ORTHO05D008494 2.8e-10 69.3 44 75.0
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 2.8e-10 69.3 65 55.4
Ca_13745_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 2.6e-08 62.8 60 55.0


User provided reference genes

Program Settings