Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 1.5e-251 872.5 462 100.0
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 4.9e-162 575.1 496 66.5
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 1.6e-160 570.1 484 66.7
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 8.1e-141 504.6 463 64.1
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 2.5e-134 483.0 501 55.5
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 1.9e-129 466.8 501 52.5
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 3.2e-129 466.1 481 54.9
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 3.6e-125 452.6 477 54.3
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 3.1e-124 449.5 425 57.4
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 5.8e-123 445.3 496 50.6
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 3.8e-122 442.6 502 49.6
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 1.1e-121 441.0 465 55.1
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 3.2e-121 439.5 481 52.0
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 3.2e-121 439.5 507 50.1
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 4.2e-121 439.1 481 52.2
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 4.2e-121 439.1 481 52.0
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 7.1e-121 438.3 502 51.6
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 1.2e-120 437.6 485 53.0
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 2.1e-120 436.8 479 52.8
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 2.7e-120 436.4 479 51.1
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 3.5e-120 436.0 503 50.3
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 6.0e-120 435.3 490 51.0
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 1.0e-119 434.5 491 50.7
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 1.0e-119 434.5 486 50.4
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 1.3e-119 434.1 463 55.3
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 3.0e-119 433.0 528 47.5
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 5.1e-119 432.2 491 50.1
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 8.7e-119 431.4 495 50.7
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 8.7e-119 431.4 517 49.7
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 2.5e-118 429.9 501 50.5
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 4.3e-118 429.1 509 50.7
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 9.6e-118 427.9 495 49.3
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 2.1e-117 426.8 447 54.1
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 1.1e-116 424.5 489 51.3
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 4.0e-116 422.5 463 53.3
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 4.0e-116 422.5 479 50.3
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 4.0e-116 422.5 499 46.7
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 1.7e-114 417.2 502 48.8
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 2.9e-114 416.4 473 49.9
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 4.9e-114 415.6 490 47.6
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 4.9e-114 415.6 493 49.1
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 2.4e-113 413.3 498 48.8
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 3.2e-113 412.9 502 48.0
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 3.2e-113 412.9 498 48.6
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 9.3e-113 411.4 478 50.2
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 1.6e-112 410.6 493 48.9
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 2.7e-112 409.8 440 52.5
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 3.9e-111 406.0 509 46.6
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 3.9e-111 406.0 552 45.1
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 6.7e-111 405.2 438 53.2
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 5.6e-110 402.1 549 45.7
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 1.6e-109 400.6 490 49.0
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 2.8e-109 399.8 501 47.7
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 6.2e-109 398.7 477 49.1
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 1.8e-108 397.1 393 54.2
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 5.3e-108 395.6 521 44.9
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 9.0e-108 394.8 444 50.9
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 9.0e-108 394.8 496 46.6
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 1.0e-106 391.3 508 46.9
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 1.7e-106 390.6 548 44.0
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 2.9e-106 389.8 486 46.7
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 8.4e-106 388.3 551 43.9
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 8.4e-106 388.3 443 50.8
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 1.6e-104 384.0 492 45.7
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 2.7e-104 383.3 479 46.8
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 6.0e-104 382.1 487 44.8
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 1.3e-103 380.9 520 44.8
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 1.3e-103 380.9 514 46.1
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 1.8e-103 380.6 460 46.7
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 2.3e-103 380.2 418 51.0
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 2.3e-103 380.2 418 51.0
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 3.0e-103 379.8 481 47.4
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 3.0e-103 379.8 458 47.8
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 6.7e-103 378.6 488 45.3
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 2.5e-102 376.7 545 44.4
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 1.3e-101 374.4 481 45.7
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 2.8e-101 373.2 441 48.1
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 9.0e-100 368.2 401 52.6
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 1.2e-99 367.9 487 46.8
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 2.6e-99 366.7 409 49.1
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 1.0e-98 364.8 487 46.4
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 1.7e-98 364.0 484 47.1
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 1.6e-96 357.5 491 45.2
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 1.3e-95 354.4 519 44.9
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 1.9e-94 350.5 448 49.6
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 7.4e-94 348.6 363 54.5
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 7.7e-91 338.6 505 42.8
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 1.9e-89 334.0 495 42.8
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 2.7e-88 330.1 511 44.0
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 2.6e-86 323.6 476 42.2
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 3.4e-83 313.2 351 51.9
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 9.4e-81 305.1 431 43.2
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 6.5e-74 282.3 353 45.9
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 1.4e-71 274.6 446 38.6
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 1.5e-70 271.2 324 45.4
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 2.8e-69 266.9 458 39.3
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 2.8e-69 266.9 384 43.8
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 1.1e-65 255.0 409 41.3
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 2.4e-60 237.3 337 40.9
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 3.1e-60 236.9 344 40.7
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 1.6e-59 234.6 375 39.2
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 5.5e-57 226.1 295 43.4
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 1.5e-54 218.0 204 55.9
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 1.6e-51 208.0 287 40.8
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 5.0e-42 176.4 164 56.7
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 1.1e-39 168.7 187 48.7
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 5.4e-36 156.4 201 46.8
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 8.6e-34 149.1 232 41.8
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 2.5e-33 147.5 216 42.6
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 3.3e-33 147.1 206 47.1
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 1.1e-31 142.1 194 43.8
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 4.1e-28 130.2 156 50.0
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 4.4e-22 110.2 428 25.7
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 7.6e-14 82.8 147 37.4
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 1.1e-12 79.0 86 50.0
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 7.8e-11 72.8 87 44.8
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 1.3e-10 72.0 70 51.4
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 4.8e-08 63.5 91 40.7
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 2.4e-07 61.2 77 46.8
CSS0039987 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 3.1e-07 60.8 50 66.0
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 9.9e-06 55.8 32 71.9
C04p54260 Brassica napus HOM05D000452 ORTHO05D005748 9.9e-06 55.8 78 42.3
BolC2t09709H Brassica oleracea HOM05D000452 ORTHO05D005748 9.9e-06 55.8 78 39.7


User provided reference genes

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