Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold27G11575 Striga asiatica HOM05D000980 ORTHO05D000649 1.0e-102 376.7 187 100.0
MSTRG.17755 Avicennia marina HOM05D000980 ORTHO05D000649 3.9e-17 92.4 196 34.2
MSTRG.21082 Avicennia marina HOM05D000980 ORTHO05D000649 2.5e-16 89.7 192 36.5
Psat1g209680 Pisum sativum HOM05D000733 ORTHO05D000649 9.5e-16 87.8 184 33.7
arahy.Tifrunner.gnm1.ann1.ECG1V9 Arachis hypogaea HOM05D000980 ORTHO05D000649 3.6e-15 85.9 184 33.7
Medtr2g011350 Medicago truncatula HOM05D000980 ORTHO05D000649 3.6e-15 85.9 184 31.5
SalBow3G1483 Salvia bowleyana HOM05D000980 ORTHO05D000649 1.4e-14 84.0 185 32.4
Ca_00222_v3 Cicer arietinum L. HOM05D001102 ORTHO05D001018 3.1e-14 82.8 169 33.7
Oeu035520.1 Olea europaea HOM05D000980 ORTHO05D000649 3.1e-14 82.8 181 33.7
TPR.G19617 Trifolium pratense HOM05D000980 ORTHO05D000649 8.9e-14 81.3 184 31.5
SGA_v2.0_scaffold331G48915 Striga asiatica HOM05D000980 ORTHO05D000649 2.0e-13 80.1 183 32.8
arahy.Tifrunner.gnm1.ann1.2X3X0W Arachis hypogaea HOM05D000980 ORTHO05D000649 2.6e-13 79.7 177 31.6
unitig_22.g6649 Utricularia gibba HOM05D000733 ORTHO05D000649 2.6e-13 79.7 188 27.7
Lj6g0019562 Lotus japonicus HOM05D000733 ORTHO05D000649 2.9e-12 76.3 184 29.9
VMungo0540G2319 Vigna mungo HOM05D000733 ORTHO05D000649 3.7e-12 75.9 180 29.4
Phvul.006G194400 Phaseolus vulgaris HOM05D000733 ORTHO05D000649 4.9e-12 75.5 180 29.4
EL10Ac9g21008 Beta vulgaris HOM05D000980 ORTHO05D000649 2.4e-11 73.2 180 31.7
ClCG01G013910 Citrullus lanatus HOM05D000980 ORTHO05D000649 2.4e-11 73.2 179 30.7
Glyma.15G065400 Glycine max HOM05D000733 ORTHO05D000649 4.1e-11 72.4 179 29.6
QL01p014798 Quercus lobata HOM05D000980 ORTHO05D000649 4.1e-11 72.4 173 31.8
Glyma.13G248600 Glycine max HOM05D000733 ORTHO05D000649 5.4e-11 72.0 178 29.8
CiPaw.14G106700 Carya illinoinensis HOM05D000733 ORTHO05D000649 1.2e-10 70.9 189 30.2
QL01p014807 Quercus lobata HOM05D000733 ORTHO05D000649 1.2e-10 70.9 179 30.2
MELO3C004861.2 Cucumis melo HOM05D000980 ORTHO05D000649 1.6e-10 70.5 179 29.6
CANSAT64G2923 Cannabis sativa HOM05D000733 ORTHO05D000649 2.7e-10 69.7 180 29.4
Hma1.2p1_0051F.1_g029590 Hydrangea macrophylla HOM05D000733 ORTHO05D000649 2.7e-10 69.7 197 29.4
ECA233G2410 Erigeron canadensis HOM05D000980 ORTHO05D000649 3.5e-10 69.3 172 29.7
Manes.04G012200 Manihot esculenta HOM05D000733 ORTHO05D000649 4.6e-10 68.9 180 26.7
PGSC0003DMG400000476 Solanum tuberosum HOM05D000733 ORTHO05D000649 4.6e-10 68.9 177 28.2
CsaV3_1G014170 Cucumis sativus L. HOM05D000980 ORTHO05D000649 6.0e-10 68.6 179 29.1
Lsat_1_v5_gn_6_41740 Lactuca sativa HOM05D000733 ORTHO05D000649 7.8e-10 68.2 169 29.0
Rhsim13G0101800 Rhododendron simsii HOM05D000733 ORTHO05D000649 1.3e-09 67.4 193 27.5
Atru.chr3.3498 Acer truncatum HOM05D000980 ORTHO05D000649 1.7e-09 67.0 180 29.4
QL01p014802 Quercus lobata HOM05D000980 ORTHO05D000649 3.0e-09 66.2 174 31.0
Ciclev10029305m.g Citrus clementina HOM05D000733 ORTHO05D000649 3.9e-09 65.9 177 29.4
Manes.11G153200 Manihot esculenta HOM05D000980 ORTHO05D000649 5.1e-09 65.5 171 26.3
Haze_23524 Corylus avellana HOM05D000980 ORTHO05D000649 8.6e-09 64.7 183 30.1
Nn2g13881 Nelumbo nucifera HOM05D000733 ORTHO05D000649 8.6e-09 64.7 182 28.6
TAR369G0482 Trochodendron aralioides HOM05D000980 ORTHO05D000649 1.1e-08 64.3 177 27.1
Cfa021147 Carpinus fangiana HOM05D000980 ORTHO05D000649 1.5e-08 63.9 173 30.6
Peaxi162Scf00392g00045 Petunia axillaris HOM05D000733 ORTHO05D000649 1.5e-08 63.9 186 25.8
TWI75G0760 Tripterygium wilfordii HOM05D000733 ORTHO05D000649 1.5e-08 63.9 176 27.3
TWI31G0681 Tripterygium wilfordii HOM05D000733 ORTHO05D000649 1.9e-08 63.5 198 26.3
Sed0007603 Sechium edule HOM05D000733 ORTHO05D000649 2.5e-08 63.2 181 29.8
Ah.01g016000 Amaranthus hybridus HOM05D000733 ORTHO05D000649 4.3e-08 62.4 181 26.5
DCAR_015500 Daucus carota HOM05D000980 ORTHO05D000649 4.3e-08 62.4 194 25.3
PSO339G5167 Papaver somniferum HOM05D000733 ORTHO05D000649 4.3e-08 62.4 179 32.4
PSO063G1903 Papaver somniferum HOM05D000733 ORTHO05D000649 5.6e-08 62.0 179 32.4
THA.LOC104810884 Tarenaya hassleriana HOM05D000733 ORTHO05D000649 5.6e-08 62.0 175 26.3
COL.COLO4_19217 Corchorus olitorius HOM05D000980 ORTHO05D000649 9.6e-08 61.2 115 34.8
Thhalv10015654m.g Eutrema salsugineum HOM05D000733 ORTHO05D000649 1.2e-07 60.8 172 26.7
Sabra16G0071400 Salix brachista HOM05D000980 ORTHO05D000649 1.6e-07 60.5 171 28.1
CAN.G246.4 Capsicum annuum HOM05D000980 ORTHO05D000649 2.1e-07 60.1 178 27.0
TAR633G0760 Trochodendron aralioides HOM05D000980 ORTHO05D000649 2.1e-07 60.1 182 26.4
Duzib170G0419 Durio zibethinus HOM05D000980 ORTHO05D000649 2.8e-07 59.7 167 28.7
Sabra16G0073800 Salix brachista HOM05D000980 ORTHO05D000649 3.6e-07 59.3 171 27.5
Sabra16G0071700 Salix brachista HOM05D000980 ORTHO05D000649 4.7e-07 58.9 171 27.5
PGSC0003DMG400024324 Solanum tuberosum HOM05D000980 ORTHO05D000649 8.1e-07 58.2 170 28.2
Sabra16G0071900 Salix brachista HOM05D000980 ORTHO05D000649 1.1e-06 57.8 171 27.5
Sabra16G0073600 Salix brachista HOM05D000980 ORTHO05D000649 1.1e-06 57.8 171 27.5
Sed0014685 Sechium edule HOM05D000980 ORTHO05D000649 1.1e-06 57.8 182 30.8
Potri.009G003800 Populus trichocarpa HOM05D000980 ORTHO05D000649 1.8e-06 57.0 159 26.4
Ciclev10012678m.g Citrus clementina HOM05D000980 ORTHO05D000649 2.4e-06 56.6 175 26.9
Nitab4.5_0005152g0040 Nicotiana tabacum HOM05D000733 ORTHO05D000649 4.0e-06 55.8 175 28.6
Dinv16242 Davidia involucrata HOM05D001163 ORTHO05D000649 8.9e-06 54.7 156 27.6
Sabra16G0071500 Salix brachista HOM05D000980 ORTHO05D000649 8.9e-06 54.7 114 31.6


User provided reference genes

Program Settings