Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold27G11560 Striga asiatica HOM05D000096 ORTHO05D000045 7.9e-299 1029.6 509 100.0
SGA_v2.0_scaffold66G22505 Striga asiatica HOM05D000096 ORTHO05D000045 1.2e-124 451.1 321 75.1
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-57 228.4 210 63.3
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 4.2e-50 203.4 152 66.4
SGA_v2.0_scaffold75G24967 Striga asiatica HOM05D018457 ORTHO05D000045 1.2e-39 168.7 164 53.0
SGA_v2.0_scaffold33G13378 Striga asiatica HOM05D000096 ORTHO05D000045 3.7e-38 163.7 168 49.4
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 7.0e-37 159.5 126 61.1
ECA233G4800 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.6e-36 158.3 215 42.8
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 2.7e-36 157.5 123 61.0
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.3e-35 154.5 215 42.3
SGA_v2.0_scaffold30G12441 Striga asiatica HOM05D000096 ORTHO05D000045 5.0e-35 153.3 164 49.4
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.5e-34 151.8 215 41.4
ECA058G0002 Erigeron canadensis HOM05D000096 ORTHO05D000045 9.5e-34 149.1 150 50.7
Cc00_g07260 Coffea canephora HOM05D000096 ORTHO05D000045 6.1e-33 146.4 172 42.4
CiPaw.02G003800 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.0e-32 143.7 163 44.8
Cc02_g03810 Coffea canephora HOM05D000096 ORTHO05D000045 9.8e-31 139.0 165 45.5
Cc02_g03220 Coffea canephora HOM05D000096 ORTHO05D000045 4.9e-30 136.7 168 43.5
ECA055G0001 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.9e-30 136.7 164 45.7
CiPaw.08G169300 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.4e-30 136.3 152 43.4
CiPaw.03G085400 Carya illinoinensis HOM05D000096 ORTHO05D000045 8.3e-30 136.0 199 39.2
CiPaw.06G111300 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.9e-29 134.8 163 44.2
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.4e-29 134.4 163 44.2
CiPaw.09G168700 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.1e-29 133.7 176 42.6
CANSAT80G1195 Cannabis sativa HOM05D000096 ORTHO05D000045 9.2e-29 132.5 163 41.7
CiPaw.14G013400 Carya illinoinensis HOM05D000096 ORTHO05D000045 9.2e-29 132.5 161 42.9
CANSAT64G1628 Cannabis sativa HOM05D000096 ORTHO05D000045 1.2e-28 132.1 165 44.2
CiPaw.10G120300 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.7e-28 131.0 144 44.4
CANSAT78G0229 Cannabis sativa HOM05D000096 ORTHO05D000045 3.5e-28 130.6 163 41.7
CiPaw.15G028600 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.0e-28 129.8 144 45.1
CiPaw.15G180000 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.0e-27 129.0 145 44.1
SGA_v2.0_scaffold511G52630 Striga asiatica HOM05D000096 ORTHO05D000045 1.0e-27 129.0 104 55.8
Atru.chr3.2970 Acer truncatum HOM05D000096 ORTHO05D000045 6.6e-27 126.3 162 42.6
CiPaw.01G296900 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.1e-26 125.6 163 39.3
CiPaw.11G156500 Carya illinoinensis HOM05D000096 ORTHO05D000045 7.3e-26 122.9 144 44.4
PGSC0003DMG400006247 Solanum tuberosum HOM05D011468 ORTHO05D012657 9.5e-26 122.5 157 39.5
Atru.chr4.2124 Acer truncatum HOM05D000096 ORTHO05D000045 4.7e-25 120.2 159 39.6
Oeu014096.1 Olea europaea HOM05D000096 ORTHO05D000045 6.2e-25 119.8 160 40.0
Oeu014098.1 Olea europaea HOM05D000096 ORTHO05D000045 1.1e-24 119.0 160 39.4
Oeu024349.1 Olea europaea HOM05D000096 ORTHO05D000045 1.4e-24 118.6 159 40.9
SGA_v2.0_scaffold260G45870 Striga asiatica HOM05D000096 ORTHO05D000045 1.4e-24 118.6 117 53.0
CAN.G205.1 Capsicum annuum HOM05D000096 ORTHO05D000045 6.8e-24 116.3 144 41.0
CiPaw.13G069100 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.2e-23 115.5 154 39.0
Oeu054130.1 Olea europaea HOM05D000096 ORTHO05D000045 1.5e-23 115.2 158 38.6
Cc03_g09110 Coffea canephora HOM05D000096 ORTHO05D000045 2.0e-23 114.8 145 41.4
CiPaw.09G109800 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.4e-23 114.0 118 47.5
CiPaw.09G189900 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.4e-23 113.6 149 40.9
Oeu043599.1 Olea europaea HOM05D000096 ORTHO05D000045 4.4e-23 113.6 171 35.1
Hma1.2p1_0115F.1_g055970 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 5.8e-23 113.2 148 41.9
AUR62027939 Chenopodium quinoa HOM05D000096 ORTHO05D000045 7.5e-23 112.8 162 36.4
Oeu063187.1 Olea europaea HOM05D000096 ORTHO05D000045 1.3e-22 112.1 164 36.0
EL10Ac6g15055 Beta vulgaris HOM05D000096 ORTHO05D000045 2.2e-22 111.3 184 37.0
PGSC0003DMG400016517 Solanum tuberosum HOM05D018632 ORTHO05D018880 2.2e-22 111.3 98 52.0
CiPaw.01G182600 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.9e-22 110.2 145 40.7
CiPaw.10G120400 Carya illinoinensis HOM05D000096 ORTHO05D000045 8.3e-22 109.4 129 42.6
Oeu049649.1 Olea europaea HOM05D000096 ORTHO05D000045 1.1e-21 109.0 169 34.3
Oeu034682.1 Olea europaea HOM05D000096 ORTHO05D000045 1.9e-21 108.2 171 35.1
CiPaw.09G160200 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.2e-21 107.5 130 40.8
SGA_v2.0_scaffold46G17401 Striga asiatica HOM05D000096 ORTHO05D000045 5.4e-21 106.7 115 47.0
EL10Ac8g20308 Beta vulgaris HOM05D000096 ORTHO05D000045 9.2e-21 105.9 182 34.1
CiPaw.01G058000 Carya illinoinensis HOM05D000096 ORTHO05D000045 9.2e-21 105.9 129 41.9
EL10Ac2g03227 Beta vulgaris HOM05D000096 ORTHO05D000045 1.2e-20 105.5 120 45.0
Oeu003460.1 Olea europaea HOM05D000096 ORTHO05D000045 1.2e-20 105.5 175 36.6
Oeu038389.1 Olea europaea HOM05D000096 ORTHO05D000045 1.2e-20 105.5 175 36.0
CANSAT25G0106 Cannabis sativa HOM05D000096 ORTHO05D000045 1.0e-19 102.4 125 46.4
Cc00_g08330 Coffea canephora HOM05D000096 ORTHO05D000045 1.3e-19 102.1 113 42.5
CANSAT25G0821 Cannabis sativa HOM05D000096 ORTHO05D000045 1.7e-19 101.7 125 46.4
Oeu007626.1 Olea europaea HOM05D000096 ORTHO05D000045 1.7e-19 101.7 145 37.2
CANSAT01G2838 Cannabis sativa HOM05D000096 ORTHO05D000045 2.3e-19 101.3 157 39.5
Oeu041800.1 Olea europaea HOM05D000096 ORTHO05D000045 6.6e-19 99.8 145 38.6
Oeu057913.1 Olea europaea HOM05D000096 ORTHO05D000045 6.6e-19 99.8 171 37.4
CiPaw.08G106200 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.5e-18 98.6 145 37.2
Oeu017259.1 Olea europaea HOM05D000096 ORTHO05D000045 1.5e-18 98.6 126 39.7
Oeu032961.1 Olea europaea HOM05D000096 ORTHO05D000045 1.9e-18 98.2 179 31.8
Oeu031952.1 Olea europaea HOM05D000096 ORTHO05D000045 4.3e-18 97.1 175 34.9
SGA_v2.0_scaffold131G34426 Striga asiatica HOM05D000096 ORTHO05D010595 4.3e-18 97.1 153 37.3
EL10Ac7g17652 Beta vulgaris HOM05D000096 ORTHO05D000045 5.6e-18 96.7 129 40.3
CANSAT56G4396 Cannabis sativa HOM05D000096 ORTHO05D000045 5.6e-18 96.7 115 42.6
Oeu017741.1 Olea europaea HOM05D000096 ORTHO05D000045 7.3e-18 96.3 175 35.4
ECA233G0447 Erigeron canadensis HOM05D000096 ORTHO05D000045 9.5e-18 95.9 201 34.3
AUR62031758 Chenopodium quinoa HOM05D000096 ORTHO05D000045 1.2e-17 95.5 233 32.2
SGA_v2.0_scaffold4G02506 Striga asiatica HOM05D000096 ORTHO05D000045 1.6e-17 95.1 94 53.2
Atru.chr12.1652 Acer truncatum HOM05D000096 ORTHO05D000045 2.8e-17 94.4 124 44.4
Oeu060826.1 Olea europaea HOM05D000096 ORTHO05D000045 3.6e-17 94.0 99 45.5
EL10Ac7g17443 Beta vulgaris HOM05D007854 ORTHO05D000045 8.1e-17 92.8 157 33.8
EL10Ac8g20587 Beta vulgaris HOM05D000096 ORTHO05D000045 8.1e-17 92.8 158 34.2
EL10Ac1g01110 Beta vulgaris HOM05D000096 ORTHO05D000045 1.1e-16 92.4 213 28.2
CAN.G265.7 Capsicum annuum HOM05D000096 ORTHO05D000045 1.4e-16 92.0 167 34.7
EL10Ac5g10500 Beta vulgaris HOM05D000096 ORTHO05D000045 1.8e-16 91.7 158 32.3
EL10Ac8g19574 Beta vulgaris HOM05D000096 ORTHO05D000045 2.3e-16 91.3 158 33.5
EL10Ac7g18199 Beta vulgaris HOM05D000096 ORTHO05D000045 5.2e-16 90.1 158 31.6
Oeu062429.1 Olea europaea HOM05D000096 ORTHO05D000045 8.9e-16 89.4 110 41.8
RcHm_v2.0_Chr5g0013161 Rosa chinensis HOM05D000096 ORTHO05D000045 8.9e-16 89.4 152 36.8
EL10Ac7g16756 Beta vulgaris HOM05D000096 ORTHO05D000045 1.2e-15 89.0 158 31.6
EL10Ac5g12706 Beta vulgaris HOM05D000096 ORTHO05D000045 2.6e-15 87.8 158 31.6
EL10Ac6g13732 Beta vulgaris HOM05D000096 ORTHO05D000045 2.6e-15 87.8 158 32.3
Atru.chr2.1644 Acer truncatum HOM05D000096 ORTHO05D000045 7.6e-15 86.3 100 45.0
CAN.G97.48 Capsicum annuum HOM05D000096 ORTHO05D000045 9.9e-15 85.9 128 38.3
SGA_v2.0_scaffold73G24447 Striga asiatica HOM05D001218 ORTHO05D004088 1.3e-14 85.5 135 35.6
Oeu005870.1 Olea europaea HOM05D000096 ORTHO05D000045 1.7e-14 85.1 110 40.9
Oeu039129.1 Olea europaea HOM05D000096 ORTHO05D000045 2.2e-14 84.7 110 40.0
ECA233G5367 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.7e-14 84.0 157 32.5
PSO357G0164 Papaver somniferum HOM05D000096 ORTHO05D000045 6.4e-14 83.2 126 36.5
EL10Ac4g09359 Beta vulgaris HOM05D000096 ORTHO05D000045 8.3e-14 82.8 175 30.3
TPR.G18330 Trifolium pratense HOM05D000096 ORTHO05D000045 8.3e-14 82.8 177 31.1
Oeu029175.1 Olea europaea HOM05D000096 ORTHO05D000045 1.1e-13 82.4 108 43.5
CAN.G273.19 Capsicum annuum HOM05D000096 ORTHO05D000045 1.4e-13 82.0 86 45.3
FvH4_3g36631 Fragaria vesca HOM05D000096 ORTHO05D000045 1.4e-13 82.0 148 35.8
Oeu046628.1 Olea europaea HOM05D000096 ORTHO05D000045 1.4e-13 82.0 99 40.4
EL10Ac5g11733 Beta vulgaris HOM05D000096 ORTHO05D000045 1.9e-13 81.6 145 31.7
Nn4g25156 Nelumbo nucifera HOM05D000096 ORTHO05D000045 2.4e-13 81.3 161 32.9
QL04p091343 Quercus lobata HOM05D000096 ORTHO05D000045 2.4e-13 81.3 158 31.6
SGA_v2.0_scaffold142G35702 Striga asiatica HOM05D000096 ORTHO05D000045 2.4e-13 81.3 86 48.8
ECA246G4273 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.2e-13 80.9 97 40.2
vmacro10242 Vaccinium macrocarpon HOM05D002150 ORTHO05D002191 3.2e-13 80.9 161 32.9
ECA240G0844 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.4e-13 80.1 157 31.8
Phvul.008G074400 Phaseolus vulgaris HOM05D000096 ORTHO05D000045 5.4e-13 80.1 143 32.9
Oeu053513.1 Olea europaea HOM05D000096 ORTHO05D000045 7.1e-13 79.7 115 39.1
Oeu033280.1 Olea europaea HOM05D000096 ORTHO05D000045 2.7e-12 77.8 98 38.8
Oeu025879.1 Olea europaea HOM05D000096 ORTHO05D000045 6.0e-12 76.6 104 40.4
Aqoxy6G02750 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 7.8e-12 76.3 142 33.8
Oeu006695.1 Olea europaea HOM05D000096 ORTHO05D000045 7.8e-12 76.3 148 35.8
EL10Ac1g02149 Beta vulgaris HOM05D000096 ORTHO05D000045 1.0e-11 75.9 155 29.0
Oeu032904.1 Olea europaea HOM05D000096 ORTHO05D000045 1.0e-11 75.9 118 37.3
Oeu017794.1 Olea europaea HOM05D000096 ORTHO05D000045 1.7e-11 75.1 114 37.7
Oeu023668.1 Olea europaea HOM05D000096 ORTHO05D000045 3.9e-11 73.9 110 38.2
Oeu029244.1 Olea europaea HOM05D000096 ORTHO05D000045 5.1e-11 73.6 115 37.4
Oeu061219.1 Olea europaea HOM05D000096 ORTHO05D000045 5.1e-11 73.6 115 36.5
PSO832G3507 Papaver somniferum HOM05D000096 ORTHO05D000045 5.1e-11 73.6 117 35.0
EL10Ac4g07888 Beta vulgaris HOM05D003315 ORTHO05D003407 1.1e-10 72.4 157 29.9
Oeu059201.1 Olea europaea HOM05D000096 ORTHO05D000045 1.5e-10 72.0 115 33.9
Oeu007778.1 Olea europaea HOM05D000096 ORTHO05D000045 1.9e-10 71.6 115 36.5
AUR62041752 Chenopodium quinoa HOM05D000096 ORTHO05D000045 2.5e-10 71.2 204 30.9
AUR62044577 Chenopodium quinoa HOM05D000096 ORTHO05D000045 2.5e-10 71.2 204 30.9
Oeu007468.1 Olea europaea HOM05D000096 ORTHO05D000045 3.3e-10 70.9 97 37.1
Oeu061729.1 Olea europaea HOM05D000096 ORTHO05D000045 5.6e-10 70.1 115 36.5
Oeu027785.3 Olea europaea HOM05D000096 ORTHO05D000045 7.3e-10 69.7 98 38.8
COL.COLO4_35927 Corchorus olitorius HOM05D000096 ORTHO05D000045 9.6e-10 69.3 128 34.4
Oeu004075.1 Olea europaea HOM05D000096 ORTHO05D000045 9.6e-10 69.3 103 34.0
Oeu049717.1 Olea europaea HOM05D000096 ORTHO05D000045 1.2e-09 68.9 115 36.5
CAN.G741.30 Capsicum annuum HOM05D000096 ORTHO05D000045 1.6e-09 68.6 86 41.9
Oeu054515.1 Olea europaea HOM05D000096 ORTHO05D000045 2.1e-09 68.2 92 37.0
SGA_v2.0_scaffold24G10705 Striga asiatica HOM05D018457 ORTHO05D000045 2.1e-09 68.2 154 29.9
SGA_v2.0_scaffold32G13337 Striga asiatica HOM05D018457 ORTHO05D000045 2.1e-09 68.2 154 29.9
EL10Ac8g19546 Beta vulgaris HOM05D000096 ORTHO05D000045 3.6e-09 67.4 159 30.8
CAN.G93.7 Capsicum annuum HOM05D000096 ORTHO05D000045 6.2e-09 66.6 86 43.0
Medtr0077s0060 Medicago truncatula HOM05D000096 ORTHO05D000045 6.2e-09 66.6 174 27.6
Zm00001eb373410 Zea mays HOM05D008064 ORTHO05D000045 6.2e-09 66.6 201 26.9
CAN.G297.5 Capsicum annuum HOM05D000096 ORTHO05D000045 8.1e-09 66.2 85 41.2
COL.COLO4_30364 Corchorus olitorius HOM05D000096 ORTHO05D000045 1.1e-08 65.9 126 35.7
PSO210G0169 Papaver somniferum HOM05D000096 ORTHO05D000045 1.4e-08 65.5 118 35.6
EL10As14g24092 Beta vulgaris HOM05D007854 ORTHO05D010168 2.4e-08 64.7 116 33.6
FvH4_5g25551 Fragaria vesca HOM05D000096 ORTHO05D000045 4.0e-08 63.9 142 29.6
Peaxi162Scf00371g00316 Petunia axillaris HOM05D002261 ORTHO05D000045 4.0e-08 63.9 64 45.3
Oeu055986.1 Olea europaea HOM05D000096 ORTHO05D000045 5.2e-08 63.5 103 35.0
TWI31G1449 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 5.2e-08 63.5 181 29.3
TWI79G0368 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 5.2e-08 63.5 167 29.9
EL10Ac1g01711 Beta vulgaris HOM05D000096 ORTHO05D000045 6.8e-08 63.2 124 32.3
TPR.G9630 Trifolium pratense HOM05D000096 ORTHO05D000045 6.8e-08 63.2 184 28.3
vmacro07726 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 6.8e-08 63.2 101 36.6
TWI56G0481 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 8.9e-08 62.8 131 35.9
TWI39G0178 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 1.5e-07 62.0 167 29.9
Oeu023240.2 Olea europaea HOM05D000096 ORTHO05D000045 2.0e-07 61.6 132 32.6
QL09p000096 Quercus lobata HOM05D000096 ORTHO05D000045 9.9e-07 59.3 132 31.8
TWI23G0742 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 1.3e-06 58.9 199 26.6
TWI75G0251 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 1.3e-06 58.9 199 26.6
SGA_v2.0_scaffold202G41441 Striga asiatica HOM05D000096 ORTHO05D000045 1.7e-06 58.5 84 41.7
CANSAT64G1799 Cannabis sativa HOM05D000096 ORTHO05D000045 2.9e-06 57.8 83 38.6
Oeu039607.1 Olea europaea HOM05D000096 ORTHO05D000045 2.9e-06 57.8 80 38.8
PGR119G0932 Punica granatum HOM05D000096 ORTHO05D000045 2.9e-06 57.8 107 38.3
FvH4_2g06413 Fragaria vesca HOM05D000096 ORTHO05D000045 4.9e-06 57.0 108 37.0
FvH4_3g10331 Fragaria vesca HOM05D000096 ORTHO05D000045 4.9e-06 57.0 142 33.1
Hma1.2p1_0146F.1_g065470 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 4.9e-06 57.0 135 30.4
Aqoxy5G03346 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 6.4e-06 56.6 132 29.5
C09p27110 Brassica napus HOM05D000096 ORTHO05D000045 8.4e-06 56.2 135 34.1
BolC8t47057H Brassica oleracea HOM05D000096 ORTHO05D000045 8.4e-06 56.2 135 34.1
BraA07t28121Z Brassica rapa HOM05D000096 ORTHO05D000045 8.4e-06 56.2 135 34.1
TWI63G1631 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 8.4e-06 56.2 168 31.0


User provided reference genes

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