Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 4.6e-100 367.9 179 100.0
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 4.4e-79 298.1 175 83.4
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 9.9e-79 297.0 174 82.8
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 2.2e-78 295.8 174 81.0
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 2.9e-78 295.4 174 79.3
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 6.4e-78 294.3 174 82.8
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 1.9e-77 292.7 174 80.5
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 2.4e-77 292.4 174 81.0
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 3.5e-76 288.5 174 79.3
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 3.5e-76 288.5 179 79.3
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 4.6e-76 288.1 174 78.7
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 1.0e-75 287.0 174 79.3
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 3.0e-75 285.4 174 78.2
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 3.9e-75 285.0 174 78.2
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 5.1e-75 284.6 174 78.2
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 1.1e-74 283.5 173 81.5
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 1.1e-74 283.5 174 78.2
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 2.5e-74 282.3 171 80.7
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 4.3e-74 281.6 176 76.7
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 4.3e-74 281.6 174 77.6
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 7.3e-74 280.8 174 77.6
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 7.3e-74 280.8 174 77.6
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 7.3e-74 280.8 174 78.2
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 7.3e-74 280.8 174 77.0
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 9.6e-74 280.4 172 79.1
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 9.6e-74 280.4 174 77.0
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 1.3e-73 280.0 173 80.9
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 2.8e-73 278.9 174 78.2
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 3.6e-73 278.5 174 76.4
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 4.8e-73 278.1 176 76.7
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 6.2e-73 277.7 175 77.1
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 4.0e-72 275.0 179 75.4
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 4.0e-72 275.0 177 75.7
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 4.0e-72 275.0 176 76.1
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 6.9e-72 274.2 173 78.0
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 9.0e-72 273.9 179 76.0
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 1.2e-71 273.5 172 77.3
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 1.5e-71 273.1 174 75.3
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 2.0e-71 272.7 175 77.1
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 2.6e-71 272.3 168 79.2
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 2.6e-71 272.3 172 79.1
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 3.4e-71 271.9 177 75.1
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 3.4e-71 271.9 171 76.6
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 4.5e-71 271.6 175 77.1
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 5.8e-71 271.2 171 76.6
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 5.8e-71 271.2 174 76.4
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 5.8e-71 271.2 175 75.4
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 9.9e-71 270.4 172 79.1
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 1.3e-70 270.0 160 80.6
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 1.7e-70 269.6 174 75.9
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 2.2e-70 269.2 168 76.8
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 2.9e-70 268.9 179 74.9
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 3.8e-70 268.5 180 74.4
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 4.9e-70 268.1 172 77.3
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 6.4e-70 267.7 162 79.6
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 6.4e-70 267.7 179 74.3
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 8.4e-70 267.3 176 75.6
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 8.4e-70 267.3 174 77.0
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 1.4e-69 266.5 172 76.2
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 3.2e-69 265.4 174 74.7
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 4.2e-69 265.0 161 80.1
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 5.4e-69 264.6 168 75.6
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 7.1e-69 264.2 171 76.0
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 7.1e-69 264.2 171 76.0
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 9.3e-69 263.8 176 74.4
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 1.6e-68 263.1 175 72.0
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 2.1e-68 262.7 180 73.3
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 2.1e-68 262.7 180 73.3
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 3.5e-68 261.9 172 74.4
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 1.8e-67 259.6 174 74.7
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 1.8e-67 259.6 174 75.9
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 3.9e-67 258.5 181 72.4
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 3.9e-67 258.5 172 73.8
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 3.9e-67 258.5 172 73.8
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 3.9e-67 258.5 174 73.0
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 3.9e-67 258.5 172 74.4
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 5.1e-67 258.1 181 71.8
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 5.1e-67 258.1 169 75.1
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 8.7e-67 257.3 181 71.8
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 8.7e-67 257.3 170 72.9
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 1.1e-66 256.9 162 77.2
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 1.1e-66 256.9 170 74.1
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 1.1e-66 256.9 173 74.6
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 1.1e-66 256.9 159 78.0
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 1.9e-66 256.1 159 78.0
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 3.3e-66 255.4 170 72.9
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 4.3e-66 255.0 160 77.5
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 9.6e-66 253.8 176 69.9
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 2.1e-65 252.7 172 72.7
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 8.1e-65 250.8 188 67.6
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 1.4e-64 250.0 179 70.9
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 3.1e-64 248.8 160 76.9
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 1.2e-63 246.9 179 69.3
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 2.6e-63 245.7 174 70.1
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 3.4e-63 245.4 172 70.9
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 3.4e-63 245.4 161 76.4
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 1.0e-62 243.8 162 71.6
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 2.2e-62 242.7 160 75.6
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 4.9e-62 241.5 159 74.8
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 1.1e-61 240.4 159 74.2
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.9e-61 239.6 168 71.4
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 9.3e-61 237.3 159 73.6
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 1.2e-60 236.9 162 74.1
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 1.0e-59 233.8 195 62.1
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 3.9e-59 231.9 146 75.3
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 3.9e-59 231.9 146 75.3
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 1.6e-57 226.5 131 84.0
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 4.8e-57 224.9 163 66.9
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 5.8e-55 218.0 149 74.5
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 7.6e-55 217.6 164 67.1
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 6.5e-54 214.5 148 71.6
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 9.3e-53 210.7 173 65.3
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 1.2e-52 210.3 162 63.6
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 1.0e-51 207.2 320 41.2
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 8.7e-51 204.1 141 72.3
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 1.9e-50 203.0 157 62.4
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 4.3e-50 201.8 186 57.0
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 9.4e-45 184.1 182 56.6
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 6.7e-43 177.9 119 72.3
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 9.7e-42 174.1 305 38.0
TAR636G1550 Trochodendron aralioides HOM05D006214 ORTHO05D007723 7.7e-39 164.5 219 43.8
ClCG08G012410 Citrullus lanatus HOM05D006214 ORTHO05D007723 3.7e-33 145.6 209 42.1
CSS0020447 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.4e-27 127.1 84 75.0
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 1.7e-25 120.2 76 72.4
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 2.6e-23 112.8 81 63.0
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 2.9e-22 109.4 73 74.0
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 1.8e-16 90.1 63 66.7
Glyma.06G080700 Glycine max HOM05D006214 ORTHO05D007723 5.5e-13 78.6 66 56.1
Peaxi162Scf00105g00513 Petunia axillaris HOM05D006214 ORTHO05D007723 2.7e-12 76.3 88 44.3
HanXRQChr07g0195131 Helianthus annuus HOM05D006214 ORTHO05D007723 8.8e-11 71.2 44 72.7
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 3.4e-10 69.3 52 61.5
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.9e-09 65.5 39 74.4
Nitab4.5_0000250g0200 Nicotiana tabacum HOM05D006214 ORTHO05D007723 1.2e-07 60.8 39 69.2
SMO164G0257 Selaginella moellendorffii HOM05D014720 ORTHO05D377594 1.7e-06 57.0 47 63.8
SalBow1G5171 Salvia bowleyana HOM05D006214 ORTHO05D007723 3.8e-06 55.8 35 77.1


User provided reference genes

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