Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold27G11523 Striga asiatica HOM05D000053 ORTHO05D404444 3.4e-92 341.7 174 100.0
CiPaw.10G158700 Carya illinoinensis HOM05D000053 ORTHO05D000448 1.6e-12 77.0 143 38.5
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 3.5e-12 75.9 71 62.0
CiPaw.10G158400 Carya illinoinensis HOM05D000053 ORTHO05D000448 2.3e-11 73.2 141 36.9
CiPaw.10G158500 Carya illinoinensis HOM05D000053 ORTHO05D000448 2.3e-11 73.2 141 36.9
THA.LOC104823374 Tarenaya hassleriana HOM05D000053 ORTHO05D000448 1.5e-10 70.5 141 34.8
CiPaw.10G158600 Carya illinoinensis HOM05D000053 ORTHO05D000448 2.5e-10 69.7 133 36.8
Cpa.g.sc120.26 Carica papaya HOM05D000053 ORTHO05D000448 9.5e-10 67.8 141 34.8
QL07p034948 Quercus lobata HOM05D000053 ORTHO05D000448 2.8e-09 66.2 150 31.3
CsaV3_3G033510 Cucumis sativus L. HOM05D000053 ORTHO05D000448 1.1e-08 64.3 109 40.4
Cfa017166 Carpinus fangiana HOM05D000053 ORTHO05D000448 3.1e-08 62.8 109 41.3
Cfa017179 Carpinus fangiana HOM05D000053 ORTHO05D000448 3.1e-08 62.8 109 41.3
SalBow5G3751 Salvia bowleyana HOM05D000053 ORTHO05D000448 4.0e-08 62.4 106 43.4
FAN02G3909 Fragaria x ananassa HOM05D000053 ORTHO05D000448 6.8e-08 61.6 94 42.6
QL07p034547 Quercus lobata HOM05D000053 ORTHO05D000448 6.8e-08 61.6 141 32.6
Dinv18513 Davidia involucrata HOM05D000053 ORTHO05D000448 1.2e-07 60.8 110 40.0
RcHm_v2.0_Chr0c39g0503261 Rosa chinensis HOM05D000053 ORTHO05D000448 1.2e-07 60.8 93 41.9
Dinv07187 Davidia involucrata HOM05D000053 ORTHO05D000448 1.5e-07 60.5 146 32.9
MD04G1161600 Malus domestica HOM05D000053 ORTHO05D000448 1.5e-07 60.5 109 39.4
SalBow5G1696 Salvia bowleyana HOM05D000053 ORTHO05D000448 1.5e-07 60.5 104 38.5
SalBow5G2318 Salvia bowleyana HOM05D000053 ORTHO05D000448 1.5e-07 60.5 104 38.5
FvH4_7g13570 Fragaria vesca HOM05D000053 ORTHO05D000448 2.6e-07 59.7 106 39.6
FAN06G5035 Fragaria x ananassa HOM05D000053 ORTHO05D000448 2.6e-07 59.7 106 39.6
Dinv18512 Davidia involucrata HOM05D000053 ORTHO05D000448 3.4e-07 59.3 143 33.6
Lj5C633T9 Lonicera japonica HOM05D000053 ORTHO05D000448 3.4e-07 59.3 139 33.8
RcHm_v2.0_Chr1g0351911 Rosa chinensis HOM05D000053 ORTHO05D000448 3.4e-07 59.3 94 44.7
GSVIVG01030353001 Vitis vinifera HOM05D000053 ORTHO05D000448 3.4e-07 59.3 115 38.3
Lj2C771T0 Lonicera japonica HOM05D000053 ORTHO05D000448 4.4e-07 58.9 100 39.0
PSO349G0014 Papaver somniferum HOM05D000053 ORTHO05D000448 4.4e-07 58.9 91 38.5
QL07p034487 Quercus lobata HOM05D000053 ORTHO05D000448 4.4e-07 58.9 109 39.4
GSVIVG01030345001 Vitis vinifera HOM05D000053 ORTHO05D000448 4.4e-07 58.9 110 38.2
FAN05G1424 Fragaria x ananassa HOM05D000053 ORTHO05D000448 5.8e-07 58.5 95 41.1
Lj2C772T1 Lonicera japonica HOM05D000053 ORTHO05D000448 5.8e-07 58.5 100 41.0
CiPaw.14G095100 Carya illinoinensis HOM05D000053 ORTHO05D000448 7.5e-07 58.2 109 35.8
Eucgr.A00564 Eucalyptus grandis HOM05D000053 ORTHO05D000448 7.5e-07 58.2 109 36.7
Lj2C770T2 Lonicera japonica HOM05D000053 ORTHO05D000448 7.5e-07 58.2 141 34.8
MD04G1161700 Malus domestica HOM05D000053 ORTHO05D000448 7.5e-07 58.2 103 38.8
Eucgr.A00585 Eucalyptus grandis HOM05D000053 ORTHO05D000448 9.8e-07 57.8 109 37.6
FAN01G0695 Fragaria x ananassa HOM05D000053 ORTHO05D000448 9.8e-07 57.8 106 38.7
Lj2C769T1 Lonicera japonica HOM05D000053 ORTHO05D000448 9.8e-07 57.8 100 40.0
Sed0015886 Sechium edule HOM05D000053 ORTHO05D000448 9.8e-07 57.8 125 36.0
Migut.J00130 Erythranthe guttata HOM05D000053 ORTHO05D000448 1.3e-06 57.4 145 30.3
Lj5C625T3 Lonicera japonica HOM05D000053 ORTHO05D000448 1.3e-06 57.4 129 34.9
MD12G1173400 Malus domestica HOM05D000053 ORTHO05D000448 1.3e-06 57.4 97 41.2
Ciclev10010939m.g Citrus clementina HOM05D000053 ORTHO05D000448 1.7e-06 57.0 111 36.0
Lj5C625T1 Lonicera japonica HOM05D000053 ORTHO05D000448 1.7e-06 57.0 140 33.6
Lj2A767T14 Lonicera japonica HOM05D000053 ORTHO05D000448 2.2e-06 56.6 100 38.0
Haze_20653 Corylus avellana HOM05D000053 ORTHO05D000448 2.9e-06 56.2 153 31.4
Lj5A637G10 Lonicera japonica HOM05D000053 ORTHO05D000448 2.9e-06 56.2 139 33.1
Oeu063387.1 Olea europaea HOM05D000053 ORTHO05D000448 2.9e-06 56.2 113 35.4
CiPaw.08G107500 Carya illinoinensis HOM05D000053 ORTHO05D000448 3.7e-06 55.8 104 40.4
CiPaw.09G212100 Carya illinoinensis HOM05D000053 ORTHO05D000448 3.7e-06 55.8 124 34.7
Migut.J00128 Erythranthe guttata HOM05D000053 ORTHO05D000448 3.7e-06 55.8 145 30.3
Eucgr.A00568 Eucalyptus grandis HOM05D000053 ORTHO05D000448 3.7e-06 55.8 109 36.7
Hma1.2p1_0479F.1_g161460 Hydrangea macrophylla HOM05D000053 ORTHO05D000448 3.7e-06 55.8 82 42.7
Lj2C766T6 Lonicera japonica HOM05D000053 ORTHO05D000448 3.7e-06 55.8 100 38.0
Migut.J00127 Erythranthe guttata HOM05D000053 ORTHO05D000448 4.9e-06 55.5 71 45.1
FAN05G1065 Fragaria x ananassa HOM05D000053 ORTHO05D000448 4.9e-06 55.5 95 41.1
PSO170G5520 Papaver somniferum HOM05D000053 ORTHO05D000448 4.9e-06 55.5 100 39.0
RcHm_v2.0_Chr1g0353291 Rosa chinensis HOM05D000053 ORTHO05D000448 4.9e-06 55.5 89 42.7
AUR62015483 Chenopodium quinoa HOM05D000053 ORTHO05D000448 6.4e-06 55.1 76 40.8
Cc10_g11760 Coffea canephora HOM05D000053 ORTHO05D000448 6.4e-06 55.1 107 36.4
CsaV3_3G033520 Cucumis sativus L. HOM05D000053 ORTHO05D000448 6.4e-06 55.1 102 39.2
MD08G1062100 Malus domestica HOM05D000053 ORTHO05D000448 6.4e-06 55.1 104 40.4
RcHm_v2.0_Chr1g0353121 Rosa chinensis HOM05D000053 ORTHO05D000448 6.4e-06 55.1 98 38.8
COL.COLO4_14499 Corchorus olitorius HOM05D004758 ORTHO05D006063 8.3e-06 54.7 108 36.1
RcHm_v2.0_Chr1g0353161 Rosa chinensis HOM05D000053 ORTHO05D000448 8.3e-06 54.7 73 43.8


User provided reference genes

Program Settings