Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold27G11478 Striga asiatica HOM05D005141 ORTHO05D006250 2.1e-205 718.8 360 100.0
MSTRG.25868 Avicennia marina HOM05D005141 ORTHO05D006250 6.6e-98 361.7 399 57.1
SalBow4G0713 Salvia bowleyana HOM05D005141 ORTHO05D006250 2.5e-97 359.8 400 56.0
Migut.A00282 Erythranthe guttata HOM05D005141 ORTHO05D006250 8.1e-96 354.8 394 57.1
Nitab4.5_0005873g0030 Nicotiana tabacum HOM05D005141 ORTHO05D006250 1.3e-66 257.7 418 46.2
Nitab4.5_0011669g0010 Nicotiana tabacum HOM05D005141 ORTHO05D006250 6.6e-66 255.4 417 45.8
Dinv30204 Davidia involucrata HOM05D005141 ORTHO05D006250 1.1e-65 254.6 379 47.2
Sopen06g024010 Solanum pennellii HOM05D005141 ORTHO05D006250 2.1e-64 250.4 416 45.2
Solyc06g065650.3 Solanum lycopersicum HOM05D005141 ORTHO05D006250 3.6e-64 249.6 416 45.0
PGSC0003DMG400026089 Solanum tuberosum HOM05D005141 ORTHO05D006250 2.4e-63 246.9 416 44.5
CAN.G199.28 Capsicum annuum HOM05D005141 ORTHO05D006250 2.0e-62 243.8 388 45.6
Lj7A714G44 Lonicera japonica HOM05D005141 ORTHO05D006250 1.6e-59 234.2 296 50.0
Cc08_g08010 Coffea canephora HOM05D005141 ORTHO05D006250 2.1e-59 233.8 403 40.7
Hma1.2p1_0175F.1_g077130 Hydrangea macrophylla HOM05D005141 ORTHO05D006250 3.5e-59 233.0 373 44.8
Peaxi162Scf00545g00034 Petunia axillaris HOM05D005141 ORTHO05D006250 8.7e-58 228.4 441 42.4
Oeu032487.3 Olea europaea HOM05D005141 ORTHO05D006250 8.1e-56 221.9 317 47.6
RcHm_v2.0_Chr6g0312851 Rosa chinensis HOM05D005141 ORTHO05D006250 1.4e-55 221.1 392 43.1
GSVIVG01035797001 Vitis vinifera HOM05D005141 ORTHO05D006250 1.4e-55 221.1 384 42.4
Prupe.1G467500 Prunus persica HOM05D005141 ORTHO05D006250 4.0e-55 219.5 379 43.8
CiPaw.07G218200 Carya illinoinensis HOM05D005141 ORTHO05D006250 1.5e-54 217.6 373 41.6
Cfa021484 Carpinus fangiana HOM05D005141 ORTHO05D006250 2.9e-53 213.4 371 41.2
Manes.03G065500 Manihot esculenta HOM05D005141 ORTHO05D006250 3.8e-53 213.0 372 43.3
Haze_21614 Corylus avellana HOM05D005141 ORTHO05D006250 4.9e-53 212.6 353 42.8
Rhsim02G0188600 Rhododendron simsii HOM05D005141 ORTHO05D006250 8.4e-53 211.8 331 45.9
Sabra06G0193700 Salix brachista HOM05D005141 ORTHO05D006250 1.1e-52 211.5 350 44.0
FAN15G0409 Fragaria x ananassa HOM05D005141 ORTHO05D006250 5.5e-52 209.1 364 43.7
MD15G1116100 Malus domestica HOM05D005141 ORTHO05D006250 7.1e-52 208.8 361 44.3
FAN27G2430 Fragaria x ananassa HOM05D005141 ORTHO05D006250 9.3e-52 208.4 415 41.0
FAN20G1096 Fragaria x ananassa HOM05D005141 ORTHO05D006250 3.5e-51 206.5 364 43.7
Oeu014659.3 Olea europaea HOM05D005141 ORTHO05D006250 3.5e-51 206.5 435 40.0
Potri.018G033700 Populus trichocarpa HOM05D005141 ORTHO05D006250 4.6e-51 206.1 348 43.4
CiPaw.08G014900 Carya illinoinensis HOM05D005141 ORTHO05D006250 1.3e-50 204.5 415 39.3
TAR383G0458 Trochodendron aralioides HOM05D005141 ORTHO05D006250 1.3e-50 204.5 402 41.3
Actinidia13429 Actinidia chinensis HOM05D005141 ORTHO05D006250 1.8e-50 204.1 340 43.5
TWI32G0021 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 2.3e-50 203.8 369 40.4
Sabra18G0034600 Salix brachista HOM05D005141 ORTHO05D006250 3.9e-50 203.0 348 41.7
FAN24G3348 Fragaria x ananassa HOM05D005141 ORTHO05D006250 8.7e-50 201.8 378 42.6
Nn2g11855 Nelumbo nucifera HOM05D005141 ORTHO05D006250 1.9e-49 200.7 384 39.8
MD08G1137500 Malus domestica HOM05D005141 ORTHO05D006250 2.5e-49 200.3 418 40.9
Manes.16G067800 Manihot esculenta HOM05D005141 ORTHO05D006250 2.5e-49 200.3 396 39.9
vmacro11124 Vaccinium macrocarpon HOM05D005141 ORTHO05D006250 2.8e-48 196.8 308 44.8
HanXRQChr02g0050641 Helianthus annuus HOM05D005141 ORTHO05D006250 6.3e-48 195.7 392 40.1
Atru.chr7.2334 Acer truncatum HOM05D005141 ORTHO05D006250 8.2e-48 195.3 323 44.9
TAR626G1320 Trochodendron aralioides HOM05D005141 ORTHO05D006250 5.3e-47 192.6 390 40.5
QL12p031441 Quercus lobata HOM05D005141 ORTHO05D006250 1.5e-46 191.0 366 41.3
Duzib187G0541 Durio zibethinus HOM05D005141 ORTHO05D006250 3.4e-46 189.9 359 41.2
TWI34G0135 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 3.4e-46 189.9 345 42.6
Thecc.09G145300 Theobroma cacao HOM05D005141 ORTHO05D006250 7.6e-46 188.7 362 39.8
CANSAT25G3062 Cannabis sativa HOM05D005141 ORTHO05D006250 1.3e-45 188.0 387 39.8
ECA233G0036 Erigeron canadensis HOM05D005141 ORTHO05D006250 1.3e-45 188.0 351 42.7
Lj1g0018494 Lotus japonicus HOM05D005141 ORTHO05D006250 1.7e-45 187.6 366 40.4
VMungo1309G3073 Vigna mungo HOM05D005141 ORTHO05D006250 2.2e-45 187.2 365 39.7
arahy.Tifrunner.gnm1.ann1.WUI646 Arachis hypogaea HOM05D005141 ORTHO05D006250 5.0e-45 186.0 349 39.5
Ciclev10008356m.g Citrus clementina HOM05D005141 ORTHO05D006250 5.0e-45 186.0 361 41.6
Medtr3g107950 Medicago truncatula HOM05D005141 ORTHO05D006250 1.4e-44 184.5 353 40.8
Glyma.06G072700 Glycine max HOM05D005141 ORTHO05D006250 1.9e-44 184.1 370 39.2
Glyma.04G071400 Glycine max HOM05D005141 ORTHO05D006250 4.2e-44 183.0 374 39.3
Duzib150G1154 Durio zibethinus HOM05D005141 ORTHO05D006250 5.5e-44 182.6 422 38.4
Eucgr.C01809 Eucalyptus grandis HOM05D005141 ORTHO05D006250 1.6e-43 181.0 370 39.5
Lalb_Chr23g0268881 Lupinus albus HOM05D005141 ORTHO05D006250 3.5e-43 179.9 360 38.3
Potri.006G247500 Populus trichocarpa HOM05D005141 ORTHO05D006250 4.6e-43 179.5 323 40.9
DCAR_022871 Daucus carota HOM05D005141 ORTHO05D006250 7.9e-43 178.7 366 38.8
TPR.G34685 Trifolium pratense HOM05D005141 ORTHO05D006250 7.9e-43 178.7 352 40.9
Dinv11587 Davidia involucrata HOM05D005141 ORTHO05D006250 1.3e-42 177.9 145 67.6
Lalb_Chr08g0243831 Lupinus albus HOM05D005141 ORTHO05D006250 8.7e-42 175.3 347 36.9
PSO782G1260 Papaver somniferum HOM05D005141 ORTHO05D006250 8.7e-42 175.3 406 36.7
Phvul.009G097300 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 1.5e-41 174.5 364 39.0
Ca_15703_v3 Cicer arietinum L. HOM05D005141 ORTHO05D006250 4.3e-41 172.9 353 38.8
TAR636G0300 Trochodendron aralioides HOM05D005141 ORTHO05D006250 5.7e-41 172.6 378 38.1
Cpa.g.sc91.20 Carica papaya HOM05D005141 ORTHO05D006250 7.4e-41 172.2 341 41.1
ClCG08G012940 Citrullus lanatus HOM05D005141 ORTHO05D006250 1.3e-40 171.4 398 37.9
Gohir.A05G010100 Gossypium hirsutum HOM05D005141 ORTHO05D006250 1.3e-40 171.4 362 38.1
PSO063G0687 Papaver somniferum HOM05D005141 ORTHO05D006250 1.3e-40 171.4 379 38.8
Duzib168G0094 Durio zibethinus HOM05D005141 ORTHO05D006250 1.6e-40 171.0 390 37.7
Lsat_1_v5_gn_1_43100 Lactuca sativa HOM05D005141 ORTHO05D006250 1.6e-40 171.0 349 39.0
Gorai.009G011200 Gossypium raimondii HOM05D005141 ORTHO05D006250 2.2e-40 170.6 382 37.2
arahy.Tifrunner.gnm1.ann1.29TRSQ Arachis hypogaea HOM05D005141 ORTHO05D006250 3.7e-40 169.9 387 35.4
HanXRQChr13g0402161 Helianthus annuus HOM05D005141 ORTHO05D006250 3.7e-40 169.9 374 39.3
FvH4_2g30050 Fragaria vesca HOM05D005141 ORTHO05D006250 1.4e-39 167.9 358 40.2
Gohir.D05G010800 Gossypium hirsutum HOM05D005141 ORTHO05D006250 3.1e-39 166.8 363 38.0
Actinidia13280 Actinidia chinensis HOM05D005141 ORTHO05D006250 7.7e-38 162.2 208 51.9
Sed0008448 Sechium edule HOM05D005141 ORTHO05D006250 5.5e-36 156.0 380 36.6
Sed0000645 Sechium edule HOM05D005141 ORTHO05D006250 7.2e-36 155.6 377 37.7
ClCG05G017130 Citrullus lanatus HOM05D005141 ORTHO05D006250 1.6e-35 154.5 374 36.4
MBI04_g39529_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 3.6e-35 153.3 322 39.4
EL10Ac2g02550 Beta vulgaris HOM05D005141 ORTHO05D006250 1.0e-34 151.8 322 37.6
Phvul.001G055100 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 1.8e-34 151.0 347 34.9
Lsat_1_v5_gn_6_22941 Lactuca sativa HOM05D005141 ORTHO05D006250 3.9e-34 149.8 382 35.3
MELO3C003675.2 Cucumis melo HOM05D005141 ORTHO05D006250 1.1e-33 148.3 328 36.3
Psat0s1782g0240 Pisum sativum HOM05D005141 ORTHO05D006250 1.5e-33 147.9 324 36.1
unitig_37.g12225 Utricularia gibba HOM05D005141 ORTHO05D006250 2.0e-33 147.5 355 38.0
MELO3C011217.2 Cucumis melo HOM05D005141 ORTHO05D006250 3.3e-33 146.7 445 31.7
Nn8g39307 Nelumbo nucifera HOM05D005141 ORTHO05D006250 7.4e-33 145.6 345 37.1
CsaV3_3G046630 Cucumis sativus L. HOM05D005141 ORTHO05D006250 9.7e-33 145.2 328 36.0
AUR62024850 Chenopodium quinoa HOM05D005141 ORTHO05D006250 1.7e-32 144.4 292 39.0
COL.COLO4_24046 Corchorus olitorius HOM05D005141 ORTHO05D006250 3.4e-30 136.7 177 49.2
PGR031G2456 Punica granatum HOM05D005141 ORTHO05D006250 7.7e-30 135.6 397 33.5
Aa31LG4G11720 Aethionema arabicum HOM05D005141 ORTHO05D006250 8.8e-26 122.1 364 32.7
Sp7g30350 Schrenkiella parvula HOM05D005141 ORTHO05D006250 1.1e-25 121.7 375 32.3
AL7G19190 Arabidopsis lyrata HOM05D005141 ORTHO05D006250 2.0e-25 120.9 375 31.5
MBI01_g37337_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 4.4e-25 119.8 302 34.1
AT4G32570 Arabidopsis thaliana HOM05D005141 ORTHO05D006250 2.2e-24 117.5 380 30.8
unitig_46.g18533 Utricularia gibba HOM05D005141 ORTHO05D006250 4.8e-24 116.3 270 38.9
BcaC01g01013 Brassica carinata HOM05D005141 ORTHO05D006250 4.1e-23 113.2 375 31.2
C03p87260 Brassica napus HOM05D005141 ORTHO05D006250 4.1e-23 113.2 376 31.6
BolC3t21027H Brassica oleracea HOM05D005141 ORTHO05D006250 4.1e-23 113.2 376 31.6
Thhalv10025562m.g Eutrema salsugineum HOM05D005141 ORTHO05D006250 4.1e-23 113.2 375 31.2
THA.LOC104803820 Tarenaya hassleriana HOM05D005141 ORTHO05D006250 1.6e-22 111.3 342 33.6
A08p18120 Brassica napus HOM05D005141 ORTHO05D006250 3.5e-22 110.2 376 30.1
ATR0083G007 Amborella trichopoda HOM05D005141 ORTHO05D006250 7.7e-22 109.0 342 33.9
CsaV3_2G031660 Cucumis sativus L. HOM05D005141 ORTHO05D006250 7.7e-22 109.0 134 50.0
BraA08t33764Z Brassica rapa HOM05D005141 ORTHO05D006250 1.7e-21 107.8 376 30.9
BcaB03g12752 Brassica carinata HOM05D005141 ORTHO05D006250 3.8e-21 106.7 386 29.8
BraA01t00550Z Brassica rapa HOM05D005141 ORTHO05D006250 6.5e-21 105.9 333 31.8
Carub.0007s0798 Capsella rubella HOM05D005141 ORTHO05D006250 8.5e-21 105.5 379 31.1
A01p05810 Brassica napus HOM05D005141 ORTHO05D006250 1.2e-19 101.7 333 31.5
C01p06380 Brassica napus HOM05D005141 ORTHO05D006250 1.0e-18 98.6 336 31.8
BcaC09g52048 Brassica carinata HOM05D005141 ORTHO05D006250 1.1e-17 95.1 337 31.2
BolC1t00634H Brassica oleracea HOM05D005141 ORTHO05D006250 1.5e-17 94.7 367 30.0
HPP92_009098 Vanilla planifolia HOM05D005141 ORTHO05D006250 7.5e-17 92.4 335 30.4
AagrBONN_evm.TU.Sc2ySwM_117.408 Anthoceros agrestis HOM05D005141 ORTHO05D006250 9.7e-17 92.0 163 41.7
SEGI_18535 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 2.4e-15 87.4 288 30.6
Mapoly0079s0053 Marchantia polymorpha HOM05D005141 ORTHO05D006250 7.0e-15 85.9 160 39.4
Pp3c22_12420 Physcomitrium patens HOM05D005141 ORTHO05D006250 7.0e-15 85.9 137 46.0
Pp3c19_8700 Physcomitrium patens HOM05D005141 ORTHO05D006250 1.6e-14 84.7 167 40.7
Glyma.17G205200 Glycine max HOM05D005141 ORTHO05D006250 5.0e-13 79.7 191 34.6
SHI18604 Sapria himalayana HOM05D005141 ORTHO05D006250 8.5e-13 79.0 277 31.8
Aqoxy7G01897 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 1.9e-12 77.8 311 31.2
Aqoxy81s001 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 2.5e-12 77.4 61 67.2
SMO143G0273 Selaginella moellendorffii HOM05D005141 ORTHO05D006250 4.7e-11 73.2 192 36.5
CSS0000568 Camellia sinensis var. sinensis HOM05D005141 ORTHO05D006250 2.6e-09 67.4 44 75.0


User provided reference genes

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