Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold279G46810 Striga asiatica HOM05D031079 ORTHO05D005947 1.1e-222 776.2 361 100.0
SGA_v2.0_scaffold279G46801 Striga asiatica HOM05D031079 ORTHO05D005947 1.0e-154 550.4 343 78.4
SGA_v2.0_scaffold279G46806 Striga asiatica HOM05D031079 ORTHO05D005947 2.5e-81 306.6 277 57.4
Migut.B00757 Erythranthe guttata HOM05D007560 ORTHO05D005947 2.8e-32 143.7 233 35.2
Migut.B00678 Erythranthe guttata HOM05D007560 ORTHO05D005947 2.6e-30 137.1 233 34.3
Migut.B00756 Erythranthe guttata HOM05D007560 ORTHO05D005947 2.6e-30 137.1 233 34.3
Migut.K01083 Erythranthe guttata HOM05D007560 ORTHO05D005947 7.5e-25 119.0 241 32.8
Migut.K01090 Erythranthe guttata HOM05D007560 ORTHO05D005947 1.4e-23 114.8 222 33.8
Migut.K01081 Erythranthe guttata HOM05D007560 ORTHO05D005947 1.8e-23 114.4 215 31.6
Migut.C00457 Erythranthe guttata HOM05D031079 ORTHO05D005947 5.0e-21 106.3 193 32.6
Lj5C338T12 Lonicera japonica HOM05D007560 ORTHO05D005947 1.3e-13 81.6 261 25.7
Lj6C625T6 Lonicera japonica HOM05D007560 ORTHO05D005947 2.3e-13 80.9 219 27.9
Lj5C336T5 Lonicera japonica HOM05D007560 ORTHO05D005947 6.5e-13 79.3 293 25.3
Rhsim11G0104200 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.5e-12 78.2 202 29.2
Rhsim11G0091600 Rhododendron simsii HOM05D007560 ORTHO05D005947 5.5e-12 76.3 211 27.0
Nitab4.5_0001737g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 9.5e-12 75.5 192 27.6
CSS0006449 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 4.7e-11 73.2 199 28.1
COL.COLO4_32922 Corchorus olitorius HOM05D007560 ORTHO05D005947 8.0e-11 72.4 205 26.3
Peaxi162Scf00153g00103 Petunia axillaris HOM05D007560 ORTHO05D005947 8.0e-11 72.4 197 27.9
Rhsim11G0104400 Rhododendron simsii HOM05D007560 ORTHO05D005947 8.0e-11 72.4 251 25.5
Cc02_g35550 Coffea canephora HOM05D007560 ORTHO05D005947 1.0e-10 72.0 205 26.3
CSS0008734 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 2.3e-10 70.9 195 29.2
CSS0014327 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 3.0e-10 70.5 195 29.2
Lj6C390T13 Lonicera japonica HOM05D007560 ORTHO05D005947 5.2e-10 69.7 263 26.2
Peaxi162Scf00058g00156 Petunia axillaris HOM05D007560 ORTHO05D005947 6.8e-10 69.3 189 26.5
Lj5C336T6 Lonicera japonica HOM05D007560 ORTHO05D005947 8.8e-10 68.9 242 24.4
Lj5C336T3 Lonicera japonica HOM05D007560 ORTHO05D005947 1.2e-09 68.6 222 27.5
CSS0006319 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 1.5e-09 68.2 195 29.2
CSS0008666 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 1.5e-09 68.2 161 30.4
Lj8C356T1 Lonicera japonica HOM05D007560 ORTHO05D005947 1.5e-09 68.2 223 26.0
Lj5C320G6 Lonicera japonica HOM05D007560 ORTHO05D005947 2.6e-09 67.4 244 23.4
Nitab4.5_0001634g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 3.4e-09 67.0 212 25.5
Nitab4.5_0000005g0280 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.3e-08 65.1 203 25.6
Lj6A404T21 Lonicera japonica HOM05D007560 ORTHO05D005947 1.7e-08 64.7 235 26.4
PGSC0003DMG400039452 Solanum tuberosum HOM05D007560 ORTHO05D005947 2.2e-08 64.3 208 24.0
Aqoxy5G01431 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.7e-08 63.5 208 26.9
Lj5C336G7 Lonicera japonica HOM05D007560 ORTHO05D005947 8.3e-08 62.4 75 38.7
COL.COLO4_14612 Corchorus olitorius HOM05D006607 ORTHO05D008166 1.1e-07 62.0 200 26.5
Rhsim11G0103400 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.1e-07 62.0 265 23.4
COL.COLO4_33377 Corchorus olitorius HOM05D007560 ORTHO05D005947 2.4e-07 60.8 260 23.5
Peaxi162Scf00408g00045 Petunia axillaris HOM05D007560 ORTHO05D005947 2.4e-07 60.8 201 26.4
Eucgr.H04774 Eucalyptus grandis HOM05D007560 ORTHO05D005947 3.1e-07 60.5 272 22.8
Rhsim11G0103500 Rhododendron simsii HOM05D007560 ORTHO05D005947 4.1e-07 60.1 213 25.8
Rhsim11G0104000 Rhododendron simsii HOM05D007560 ORTHO05D005947 4.1e-07 60.1 248 25.0
TAR371G0533 Trochodendron aralioides HOM05D000007 ORTHO05D007252 7.0e-07 59.3 194 26.3
Lj8P356T21 Lonicera japonica HOM05D007560 ORTHO05D005947 1.2e-06 58.5 166 26.5
Lj5C338T9 Lonicera japonica HOM05D007560 ORTHO05D005947 2.7e-06 57.4 83 31.3
Gorai.009G452800 Gossypium raimondii HOM05D008437 ORTHO05D010577 3.5e-06 57.0 147 24.5
Nitab4.5_0001058g0060 Nicotiana tabacum HOM05D007560 ORTHO05D005947 4.5e-06 56.6 231 22.1
Lj5C338T11 Lonicera japonica HOM05D007560 ORTHO05D005947 5.9e-06 56.2 83 31.3


User provided reference genes

Program Settings