Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold279G46774 Striga asiatica HOM05D018612 ORTHO05D011912 1.1e-198 696.4 353 100.0
SGA_v2.0_scaffold158G37502 Striga asiatica HOM05D018612 ORTHO05D011912 1.2e-54 218.0 103 98.1
SGA_v2.0_scaffold223G42819 Striga asiatica HOM05D018612 ORTHO05D011912 1.2e-54 218.0 103 98.1
SGA_v2.0_scaffold136G35019 Striga asiatica HOM05D018612 ORTHO05D011912 5.4e-52 209.1 103 95.1
SGA_v2.0_scaffold211G42115 Striga asiatica HOM05D018612 ORTHO05D011912 6.5e-50 202.2 103 89.3
SGA_v2.0_scaffold5187G54608 Striga asiatica HOM05D018612 ORTHO05D011912 8.9e-47 191.8 95 92.6
SGA_v2.0_scaffold147G36332 Striga asiatica HOM05D013095 ORTHO05D011912 4.7e-16 89.7 81 54.3
SGA_v2.0_scaffold85G26590 Striga asiatica HOM05D013095 ORTHO05D011912 4.7e-16 89.7 81 54.3
SGA_v2.0_scaffold25G11032 Striga asiatica HOM05D018612 ORTHO05D011912 6.2e-16 89.4 146 41.1
SGA_v2.0_scaffold85G26669 Striga asiatica HOM05D018166 ORTHO05D011912 2.6e-14 84.0 89 43.8
SGA_v2.0_scaffold355G49765 Striga asiatica HOM05D013095 ORTHO05D011912 5.8e-14 82.8 81 51.9
SGA_v2.0_scaffold96G29033 Striga asiatica HOM05D018166 ORTHO05D011912 5.8e-14 82.8 89 42.7
SGA_v2.0_scaffold99G29481 Striga asiatica HOM05D018166 ORTHO05D011912 1.7e-13 81.3 89 42.7
SGA_v2.0_scaffold21G09368 Striga asiatica HOM05D018166 ORTHO05D011912 2.2e-13 80.9 89 42.7
SGA_v2.0_scaffold117G32327 Striga asiatica HOM05D018166 ORTHO05D011912 2.1e-11 74.3 89 39.3
SGA_v2.0_scaffold50G18510 Striga asiatica HOM05D029849 ORTHO05D011912 2.1e-11 74.3 60 50.0
SGA_v2.0_scaffold3G01620 Striga asiatica HOM05D018395 ORTHO05D011912 7.8e-11 72.4 108 38.9
SGA_v2.0_scaffold266G46147 Striga asiatica HOM05D029849 ORTHO05D011912 1.0e-10 72.0 60 46.7
SGA_v2.0_scaffold11G05582 Striga asiatica HOM05D018166 ORTHO05D011912 2.3e-10 70.9 64 45.3
SalBow8G4103 Salvia bowleyana HOM05D008808 ORTHO05D009453 1.6e-08 64.7 76 43.4
SalBow7G0742 Salvia bowleyana HOM05D008808 ORTHO05D009453 4.7e-08 63.2 76 40.8
SalBow1G3139 Salvia bowleyana HOM05D009427 ORTHO05D009453 6.2e-08 62.8 101 32.7
SalBow6G6190 Salvia bowleyana HOM05D008808 ORTHO05D009453 6.2e-08 62.8 76 40.8
SGA_v2.0_scaffold6G03468 Striga asiatica HOM05D018395 ORTHO05D011912 1.1e-07 62.0 95 38.9
SalBow7G3411 Salvia bowleyana HOM05D009427 ORTHO05D009453 1.4e-07 61.6 55 47.3
Peaxi162Scf00814g00243 Petunia axillaris HOM05D001383 ORTHO05D000309 2.4e-07 60.8 80 40.0
SalBow4G1975 Salvia bowleyana HOM05D027806 ORTHO05D009453 2.4e-07 60.8 73 38.4
SalBow5G4834 Salvia bowleyana HOM05D058812 ORTHO05D009453 4.0e-07 60.1 68 39.7
Peaxi162Scf00446g00005 Petunia axillaris HOM05D001383 ORTHO05D000309 5.2e-07 59.7 77 40.3
Lsat_1_v5_gn_6_56121 Lactuca sativa HOM05D009289 ORTHO05D000309 1.5e-06 58.2 94 42.6
Nitab4.5_0000131g0190 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.5e-06 58.2 68 39.7
Peaxi162Scf00084g01219 Petunia axillaris HOM05D001383 ORTHO05D000309 1.5e-06 58.2 79 38.0
SalBow4G1662 Salvia bowleyana HOM05D001898 ORTHO05D002580 1.5e-06 58.2 90 36.7
SalBow3G3378 Salvia bowleyana HOM05D000162 ORTHO05D000090 2.0e-06 57.8 80 35.0
Lsat_1_v5_gn_1_95961 Lactuca sativa HOM05D009585 ORTHO05D000309 2.6e-06 57.4 56 51.8
Lsat_1_v5_gn_4_160641 Lactuca sativa HOM05D009585 ORTHO05D000309 2.6e-06 57.4 56 51.8
Peaxi162Scf00491g00037 Petunia axillaris HOM05D001883 ORTHO05D002184 2.6e-06 57.4 91 41.8
Peaxi162Scf00578g00524 Petunia axillaris HOM05D001383 ORTHO05D000309 2.6e-06 57.4 79 38.0
Nitab4.5_0001931g0130 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.4e-06 56.6 92 37.0
Nitab4.5_0007410g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.4e-06 56.6 88 36.4
Peaxi162Scf00171g00022 Petunia axillaris HOM05D001383 ORTHO05D000309 4.4e-06 56.6 80 35.0
Peaxi162Scf00225g00101 Petunia axillaris HOM05D001383 ORTHO05D000309 4.4e-06 56.6 80 35.0
Peaxi162Scf00699g00025 Petunia axillaris HOM05D001383 ORTHO05D000309 4.4e-06 56.6 80 35.0
Nitab4.5_0001487g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 5.8e-06 56.2 94 34.0
Nitab4.5_0011837g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 5.8e-06 56.2 94 34.0
Peaxi162Scf00066g00114 Petunia axillaris HOM05D001883 ORTHO05D002184 5.8e-06 56.2 87 39.1
Peaxi162Scf01070g00003 Petunia axillaris HOM05D001883 ORTHO05D002184 5.8e-06 56.2 87 39.1
SalBow1G0840 Salvia bowleyana HOM05D009427 ORTHO05D009453 5.8e-06 56.2 60 45.0
Hma1.2p1_0785F.1_g217480 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.6e-06 55.8 68 36.8
Peaxi162Scf00012g01429 Petunia axillaris HOM05D001383 ORTHO05D000309 7.6e-06 55.8 75 36.0
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 7.6e-06 55.8 72 37.5
SalBow3G1429 Salvia bowleyana HOM05D008808 ORTHO05D009453 7.6e-06 55.8 69 44.9
SalBow6G5997 Salvia bowleyana HOM05D008544 ORTHO05D010680 7.6e-06 55.8 61 44.3
COL.COLO4_30330 Corchorus olitorius HOM05D015200 ORTHO05D000309 9.9e-06 55.5 96 35.4
Lsat_1_v5_gn_2_57141 Lactuca sativa HOM05D009585 ORTHO05D000309 9.9e-06 55.5 61 44.3
Nitab4.5_0004598g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 9.9e-06 55.5 83 38.6
Nitab4.5_0009420g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 9.9e-06 55.5 140 30.0
Peaxi162Scf00990g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 9.9e-06 55.5 77 35.1
SalBow1G4300 Salvia bowleyana HOM05D008808 ORTHO05D009453 9.9e-06 55.5 56 42.9
SalBow8G1086 Salvia bowleyana HOM05D008544 ORTHO05D010680 9.9e-06 55.5 85 38.8


User provided reference genes

Program Settings