Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold277G46672 Striga asiatica HOM05D005563 ORTHO05D006667 4.4e-236 820.8 396 100.0
Migut.G00338 Erythranthe guttata HOM05D005563 ORTHO05D006667 6.2e-150 534.6 404 65.3
Oeu019017.1 Olea europaea HOM05D005563 ORTHO05D006667 8.8e-128 461.1 423 56.3
Cc02_g22680 Coffea canephora HOM05D005563 ORTHO05D006667 9.7e-127 457.6 427 56.0
Dinv22054 Davidia involucrata HOM05D005563 ORTHO05D006667 3.7e-126 455.7 407 57.5
Oeu009445.1 Olea europaea HOM05D005563 ORTHO05D006667 1.1e-125 454.1 428 56.1
Ciclev10020232m.g Citrus clementina HOM05D005563 ORTHO05D006667 5.9e-124 448.4 417 55.2
CSS0002080 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 1.3e-123 447.2 417 55.4
RcHm_v2.0_Chr6g0249561 Rosa chinensis HOM05D005563 ORTHO05D006667 3.8e-123 445.7 415 55.4
CSS0040007 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 5.0e-123 445.3 417 55.4
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 9.4e-122 441.0 376 60.1
GSVIVG01037139001 Vitis vinifera HOM05D005563 ORTHO05D006667 4.7e-121 438.7 394 58.1
CAN.G587.23 Capsicum annuum HOM05D005563 ORTHO05D006667 6.7e-120 434.9 398 55.8
Nitab4.5_0006591g0020 Nicotiana tabacum HOM05D005563 ORTHO05D006667 2.0e-119 433.3 392 56.4
Prupe.8G002700 Prunus persica HOM05D005563 ORTHO05D006667 9.7e-119 431.0 412 53.9
Potri.013G094800 Populus trichocarpa HOM05D005563 ORTHO05D006667 1.3e-118 430.6 410 57.3
QL09p001227 Quercus lobata HOM05D005563 ORTHO05D006667 1.3e-118 430.6 408 55.4
FvH4_2g00270 Fragaria vesca HOM05D005563 ORTHO05D006667 1.7e-118 430.3 412 54.1
Nn5g27214 Nelumbo nucifera HOM05D005563 ORTHO05D006667 1.7e-118 430.3 405 54.3
PGSC0003DMG400014277 Solanum tuberosum HOM05D005563 ORTHO05D006667 2.2e-118 429.9 388 57.7
DCAR_010113 Daucus carota HOM05D005563 ORTHO05D006667 2.8e-118 429.5 416 54.3
MD10G1001500 Malus domestica HOM05D005563 ORTHO05D006667 3.7e-118 429.1 414 53.6
Atru.chr13.2584 Acer truncatum HOM05D005563 ORTHO05D006667 1.1e-117 427.6 423 51.1
DCAR_001180 Daucus carota HOM05D005563 ORTHO05D006667 1.4e-117 427.2 417 53.5
Rhsim01G0058900 Rhododendron simsii HOM05D005563 ORTHO05D006667 1.4e-117 427.2 418 54.3
Actinidia29363 Actinidia chinensis HOM05D005563 ORTHO05D006667 4.1e-117 425.6 402 55.5
TAR628G0232 Trochodendron aralioides HOM05D005563 ORTHO05D006667 4.1e-117 425.6 411 53.5
Solyc03g026100.1 Solanum lycopersicum HOM05D005563 ORTHO05D006667 5.3e-117 425.2 388 57.0
CAN.G769.9 Capsicum annuum HOM05D005563 ORTHO05D006667 9.1e-117 424.5 397 55.2
Sabra13G0080900 Salix brachista HOM05D005563 ORTHO05D006667 2.0e-116 423.3 408 56.6
Sopen03g004940 Solanum pennellii HOM05D005563 ORTHO05D006667 2.0e-116 423.3 379 57.8
Rhsim01G0059200 Rhododendron simsii HOM05D005563 ORTHO05D006667 4.5e-116 422.2 418 54.5
CANSAT64G1925 Cannabis sativa HOM05D005563 ORTHO05D006667 1.7e-115 420.2 409 52.8
DCAR_027509 Daucus carota HOM05D005563 ORTHO05D006667 2.2e-115 419.9 408 54.4
Cfa007306 Carpinus fangiana HOM05D005563 ORTHO05D006667 6.5e-115 418.3 414 53.6
ECA232G0495 Erigeron canadensis HOM05D004116 ORTHO05D004734 3.2e-114 416.0 383 54.8
FAN24G3564 Fragaria x ananassa HOM05D005563 ORTHO05D006667 3.2e-114 416.0 431 51.5
vmacro07741 Vaccinium macrocarpon HOM05D005563 ORTHO05D006667 4.2e-114 415.6 416 52.6
CiPaw.04G008700 Carya illinoinensis HOM05D005563 ORTHO05D006667 1.6e-113 413.7 413 53.8
Glyma.13G312100 Glycine max HOM05D005563 ORTHO05D006667 1.6e-113 413.7 407 54.1
PGR044G0823 Punica granatum HOM05D005563 ORTHO05D006667 2.7e-113 412.9 414 52.9
Phvul.005G118600 Phaseolus vulgaris HOM05D005563 ORTHO05D006667 6.1e-113 411.8 401 54.1
VMungo1080G1448 Vigna mungo HOM05D005563 ORTHO05D006667 4.0e-112 409.1 400 55.2
Aqoxy1G00244 Aquilegia oxysepala HOM05D005563 ORTHO05D006667 2.0e-111 406.8 409 53.3
Lj3g0011209 Lotus japonicus HOM05D005563 ORTHO05D006667 2.6e-111 406.4 401 54.9
Lalb_Chr24g0393341 Lupinus albus HOM05D005563 ORTHO05D006667 2.6e-111 406.4 404 55.4
ClCG11G000440 Citrullus lanatus HOM05D005563 ORTHO05D006667 3.1e-109 399.4 409 53.5
Duzib177G0343 Durio zibethinus HOM05D005563 ORTHO05D006667 7.0e-109 398.3 402 53.0
Thecc.05G149300 Theobroma cacao HOM05D005563 ORTHO05D006667 9.1e-109 397.9 408 52.9
Medtr8g103020 Medicago truncatula HOM05D005563 ORTHO05D006667 4.5e-108 395.6 410 53.4
THA.LOC104825030 Tarenaya hassleriana HOM05D005563 ORTHO05D006667 1.0e-107 394.4 404 52.5
Lsat_1_v5_gn_4_170241 Lactuca sativa HOM05D005563 ORTHO05D006667 1.3e-107 394.0 392 53.1
Thhalv10018623m.g Eutrema salsugineum HOM05D005563 ORTHO05D006667 1.7e-107 393.7 396 53.0
Eucgr.G00337 Eucalyptus grandis HOM05D005563 ORTHO05D006667 2.9e-107 392.9 383 54.3
CARHR064610 Cardamine hirsuta HOM05D005563 ORTHO05D006667 3.8e-107 392.5 403 51.1
Sp5g26490 Schrenkiella parvula HOM05D005563 ORTHO05D006667 6.5e-107 391.7 404 52.5
arahy.Tifrunner.gnm1.ann1.QV839S Arachis hypogaea HOM05D005563 ORTHO05D006667 1.1e-106 391.0 410 51.7
TPR.G23443 Trifolium pratense HOM05D005563 ORTHO05D006667 7.2e-106 388.3 426 51.6
Gorai.009G262600 Gossypium raimondii HOM05D005563 ORTHO05D006667 9.4e-106 387.9 402 51.7
A07p30780 Brassica napus HOM05D005563 ORTHO05D006667 2.1e-105 386.7 402 52.0
AL2G30920 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 4.7e-105 385.6 391 53.2
C06p35680 Brassica napus HOM05D005563 ORTHO05D006667 3.0e-104 382.9 402 52.7
CsaV3_6G042510 Cucumis sativus L. HOM05D005563 ORTHO05D006667 4.0e-104 382.5 408 51.0
AL1G12770 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 5.2e-104 382.1 394 52.3
BcaC08g45784 Brassica carinata HOM05D005563 ORTHO05D006667 5.2e-104 382.1 402 52.5
BraA07t30715Z Brassica rapa HOM05D005563 ORTHO05D006667 2.6e-103 379.8 406 51.0
BolC6t38691H Brassica oleracea HOM05D005563 ORTHO05D006667 1.3e-102 377.5 406 52.0
BcaB03g14889 Brassica carinata HOM05D005563 ORTHO05D006667 1.7e-102 377.1 406 50.5
BcaB03g15600 Brassica carinata HOM05D005563 ORTHO05D006667 1.7e-102 377.1 402 51.2
AT5G24670 Arabidopsis thaliana HOM05D005563 ORTHO05D006667 2.2e-102 376.7 392 51.3
Carub.0002s1819 Capsella rubella HOM05D005563 ORTHO05D006667 4.8e-102 375.6 391 51.7
MBI14_g08074_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 4.8e-102 375.6 396 52.5
Haze_14007 Corylus avellana HOM05D005563 ORTHO05D006667 8.3e-102 374.8 531 43.1
Aa31LG4G9220 Aethionema arabicum HOM05D005563 ORTHO05D006667 1.1e-101 374.4 402 51.2
Nitab4.5_0001489g0080 Nicotiana tabacum HOM05D005563 ORTHO05D006667 1.8e-101 373.6 349 55.0
Psat7g014680 Pisum sativum HOM05D005563 ORTHO05D006667 1.8e-101 373.6 427 49.6
PSO170G2533 Papaver somniferum HOM05D005563 ORTHO05D006667 9.1e-101 371.3 383 52.7
PSO761G0451 Papaver somniferum HOM05D005563 ORTHO05D006667 9.1e-101 371.3 423 47.8
PSO017G5640 Papaver somniferum HOM05D005563 ORTHO05D006667 1.9e-98 363.6 390 51.3
Carub.0004s0662 Capsella rubella HOM05D005563 ORTHO05D006667 2.1e-97 360.1 383 52.5
PSO407G0243 Papaver somniferum HOM05D005563 ORTHO05D006667 3.0e-96 356.3 387 51.2
Hund26934 Selenicereus undatus HOM05D005563 ORTHO05D006667 3.0e-96 356.3 411 48.9
Manes.18G108800 Manihot esculenta HOM05D005563 ORTHO05D006667 3.7e-94 349.4 350 52.0
Nitab4.5_0000079g0140 Nicotiana tabacum HOM05D005563 ORTHO05D006667 4.9e-94 349.0 384 49.7
HanXRQChr15g0488461 Helianthus annuus HOM05D005563 ORTHO05D006667 2.4e-93 346.7 318 53.8
ATR0580G344 Amborella trichopoda HOM05D005563 ORTHO05D006667 1.0e-91 341.3 409 46.9
TAR633G2728 Trochodendron aralioides HOM05D005563 ORTHO05D006667 9.5e-90 334.7 351 50.1
Peaxi162Scf00078g01133 Petunia axillaris HOM05D005563 ORTHO05D006667 1.2e-89 334.3 341 52.2
TWI18G0160 Tripterygium wilfordii HOM05D005563 ORTHO05D006667 7.5e-87 325.1 430 43.7
arahy.Tifrunner.gnm1.ann1.NB4SND Arachis hypogaea HOM05D005563 ORTHO05D006667 1.4e-85 320.9 431 45.0
AUR62023340 Chenopodium quinoa HOM05D005563 ORTHO05D006667 7.0e-85 318.5 400 46.5
Sed0012109 Sechium edule HOM05D005563 ORTHO05D006667 2.7e-84 316.6 327 53.5
MELO3C022956.2 Cucumis melo HOM05D005563 ORTHO05D006667 3.6e-81 306.2 355 49.3
AUR62013814 Chenopodium quinoa HOM05D005563 ORTHO05D006667 3.4e-79 299.7 491 39.3
Eucgr.C03620 Eucalyptus grandis HOM05D005563 ORTHO05D006667 3.7e-70 269.6 289 48.8
TPR.G11352 Trifolium pratense HOM05D005563 ORTHO05D006667 1.2e-68 264.6 282 52.5
Gohir.A05G248000 Gossypium hirsutum HOM05D005563 ORTHO05D006667 1.6e-68 264.2 313 48.2
BcaB03g14888 Brassica carinata HOM05D005563 ORTHO05D006667 3.5e-68 263.1 345 44.9
FAN19G1429 Fragaria x ananassa HOM05D005563 ORTHO05D006667 4.6e-68 262.7 432 41.2
Gohir.D05G248801 Gossypium hirsutum HOM05D005563 ORTHO05D006667 1.9e-66 257.3 313 47.6
AUR62037990 Chenopodium quinoa HOM05D005563 ORTHO05D006667 3.3e-66 256.5 290 47.2
Sc19g0006900 Simmondsia chinensis HOM05D005563 ORTHO05D006667 1.5e-63 247.7 312 46.5
EL10Ac1g00691 Beta vulgaris HOM05D005563 ORTHO05D006667 2.2e-62 243.8 356 41.6
SMO356G0078 Selaginella moellendorffii HOM05D005563 ORTHO05D006667 1.8e-56 224.2 378 36.8
Cpa.g.sc249.8 Carica papaya HOM05D005563 ORTHO05D006667 4.4e-55 219.5 165 63.0
Mapoly0019s0003 Marchantia polymorpha HOM05D005563 ORTHO05D006667 4.9e-54 216.1 406 36.2
AagrBONN_evm.TU.Sc2ySwM_344.1216 Anthoceros agrestis HOM05D005563 ORTHO05D006667 8.4e-54 215.3 466 32.6
CDE04G2046 Ceratophyllum demersum HOM05D005563 ORTHO05D006667 1.4e-53 214.5 249 48.2
Pp3c5_5220 Physcomitrium patens HOM05D005563 ORTHO05D006667 4.2e-53 213.0 367 38.7
SHI17431 Sapria himalayana HOM05D005563 ORTHO05D006667 4.8e-49 199.5 241 45.6
COL.COLO4_34067 Corchorus olitorius HOM05D005563 ORTHO05D006667 9.0e-48 195.3 287 42.2
Ca_17321_v3 Cicer arietinum L. HOM05D005563 ORTHO05D006667 5.8e-47 192.6 324 40.7
BolC6t39597H Brassica oleracea HOM05D005563 ORTHO05D006667 5.4e-45 186.0 311 38.3
Zm00001eb088860 Zea mays HOM05D005563 ORTHO05D006667 7.1e-45 185.7 256 43.4
HPP92_009712 Vanilla planifolia HOM05D005563 ORTHO05D006667 6.7e-43 179.1 253 41.1
MCO11G544 Micromonas commoda HOM05D005563 ORTHO05D006667 1.9e-34 151.0 348 32.2
Eucgr.C03478 Eucalyptus grandis HOM05D005563 ORTHO05D006667 4.3e-34 149.8 182 46.2
MBI13_g08747_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 4.0e-32 143.3 84 72.6
MBI14_g20078_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 9.0e-32 142.1 84 72.6
TPR.G11340 Trifolium pratense HOM05D005563 ORTHO05D006667 2.6e-31 140.6 85 70.6
MBI08_g10505_MAGBIO Magnolia biondii HOM05D000152 ORTHO05D006667 5.8e-31 139.4 71 80.3
MBI15_g36474_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 8.4e-30 135.6 102 59.8
Eucgr.C03640 Eucalyptus grandis HOM05D005563 ORTHO05D006667 2.1e-28 131.0 74 77.0
Actinidia03534 Actinidia chinensis HOM05D005563 ORTHO05D006667 4.6e-28 129.8 213 42.7
Eucgr.L00998 Eucalyptus grandis HOM05D005563 ORTHO05D006667 4.8e-25 119.8 190 39.5
Cre10.g439200 Chlamydomonas reinhardtii HOM05D005563 ORTHO05D006667 2.6e-23 114.0 425 26.6
CBR_g50242 Chara braunii HOM05D005563 ORTHO05D006667 3.4e-23 113.6 583 21.8
FAN20G2324 Fragaria x ananassa HOM05D005563 ORTHO05D006667 1.1e-21 108.6 59 74.6
CBR_g8323 Chara braunii HOM05D005563 ORTHO05D006667 2.3e-19 100.9 164 34.8
C06p46160 Brassica napus HOM05D005563 ORTHO05D006667 5.1e-19 99.8 211 37.0
Thecc.10G189600 Theobroma cacao HOM05D005563 ORTHO05D006667 2.0e-18 97.8 103 53.4
DCAR_001179 Daucus carota HOM05D005563 ORTHO05D006667 5.3e-16 89.7 180 36.1
PRCOL_00003298 Prasinoderma coloniale HOM05D005563 ORTHO05D006667 1.8e-11 74.7 137 32.8
SHI17433 Sapria himalayana HOM05D005563 ORTHO05D006667 1.5e-10 71.6 57 61.4
Eucgr.C03636 Eucalyptus grandis HOM05D005563 ORTHO05D006667 2.8e-09 67.4 131 35.1


User provided reference genes

Program Settings