Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold276G46636 Striga asiatica HOM05D003234 ORTHO05D003635 2.6e-104 382.1 199 100.0
Migut.H00998 Erythranthe guttata HOM05D003234 ORTHO05D003635 1.4e-36 157.1 124 68.5
MSTRG.23532 Avicennia marina HOM05D003234 ORTHO05D003635 4.4e-35 152.1 124 66.9
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 4.1e-33 145.6 123 66.7
CSS0031108 Camellia sinensis var. sinensis HOM05D003234 ORTHO05D003635 8.5e-31 137.9 124 59.7
Ciclev10026821m.g Citrus clementina HOM05D003234 ORTHO05D003635 2.8e-29 132.9 124 60.5
Actinidia12120 Actinidia chinensis HOM05D003234 ORTHO05D003635 4.7e-29 132.1 124 58.9
Manes.01G134700 Manihot esculenta HOM05D003234 ORTHO05D003635 6.1e-29 131.7 124 58.1
Cc07_g09430 Coffea canephora HOM05D003234 ORTHO05D003635 8.0e-29 131.3 124 58.9
Lsat_1_v5_gn_3_77600 Lactuca sativa HOM05D003234 ORTHO05D003635 1.4e-28 130.6 123 56.1
HanXRQChr15g0482261 Helianthus annuus HOM05D003234 ORTHO05D003635 1.8e-28 130.2 124 58.1
Actinidia36555 Actinidia chinensis HOM05D003234 ORTHO05D003635 3.0e-28 129.4 124 58.9
ECA246G3301 Erigeron canadensis HOM05D003234 ORTHO05D003635 3.0e-28 129.4 125 58.4
Gohir.D12G065100 Gossypium hirsutum HOM05D003234 ORTHO05D003635 2.0e-27 126.7 124 54.0
Gorai.008G068300 Gossypium raimondii HOM05D003234 ORTHO05D003635 2.0e-27 126.7 124 54.0
CiPaw.02G016600 Carya illinoinensis HOM05D003234 ORTHO05D003635 2.6e-27 126.3 124 58.9
Hma1.2p1_0717F.1_g208130 Hydrangea macrophylla HOM05D003234 ORTHO05D003635 3.7e-26 122.5 124 54.0
Thecc.01G037000 Theobroma cacao HOM05D003234 ORTHO05D003635 6.3e-26 121.7 124 53.2
Atru.chr3.563 Acer truncatum HOM05D003234 ORTHO05D003635 1.4e-25 120.6 124 57.3
Gorai.011G102100 Gossypium raimondii HOM05D003234 ORTHO05D003635 2.7e-24 116.3 124 52.4
CAN.G358.101 Capsicum annuum HOM05D003234 ORTHO05D003635 4.5e-24 115.5 124 53.2
Gohir.D10G092900 Gossypium hirsutum HOM05D003234 ORTHO05D003635 2.9e-23 112.8 124 51.6
Gohir.A10G095000 Gossypium hirsutum HOM05D003234 ORTHO05D003635 3.8e-23 112.5 124 50.8
Sopen02g030060 Solanum pennellii HOM05D003234 ORTHO05D003635 8.6e-23 111.3 124 54.8
GSVIVG01018978001 Vitis vinifera HOM05D003234 ORTHO05D003635 3.3e-22 109.4 124 51.6
Dinv39975 Davidia involucrata HOM05D003234 ORTHO05D003635 1.2e-21 107.5 123 53.7
Lj4g0023984 Lotus japonicus HOM05D003234 ORTHO05D003635 3.0e-20 102.8 124 50.8
Lalb_Chr09g0322471 Lupinus albus HOM05D003234 ORTHO05D003635 3.0e-20 102.8 124 51.6
Migut.L00515 Erythranthe guttata HOM05D003234 ORTHO05D003635 3.4e-19 99.4 126 46.8
CANSAT01G1184 Cannabis sativa HOM05D003234 ORTHO05D003635 9.8e-19 97.8 125 47.2
Glyma.11G067600 Glycine max HOM05D003234 ORTHO05D003635 9.8e-19 97.8 124 49.2
Psat4g092120 Pisum sativum HOM05D003234 ORTHO05D003635 9.8e-19 97.8 124 52.4
Glyma.01G175400 Glycine max HOM05D003234 ORTHO05D003635 1.3e-18 97.4 124 48.4
Nn1g05018 Nelumbo nucifera HOM05D003234 ORTHO05D003635 1.3e-18 97.4 126 48.4
ATR0733G120 Amborella trichopoda HOM05D003234 ORTHO05D003635 1.7e-18 97.1 125 49.6
TPR.G34985 Trifolium pratense HOM05D003234 ORTHO05D003635 2.2e-18 96.7 124 51.6
Aqoxy5G01648 Aquilegia oxysepala HOM05D003234 ORTHO05D003635 1.2e-16 90.9 124 46.8
Gohir.A12G065000 Gossypium hirsutum HOM05D003234 ORTHO05D003635 4.6e-16 89.0 124 41.1
SEGI_11040 Sequoiadendron giganteum HOM05D003234 ORTHO05D003635 5.9e-16 88.6 125 44.0
Phvul.002G029601 Phaseolus vulgaris HOM05D003234 ORTHO05D003635 1.1e-14 84.3 124 44.4
Eucgr.I02454 Eucalyptus grandis HOM05D003234 ORTHO05D003635 3.3e-14 82.8 124 40.3
Zm00001eb009770 Zea mays HOM05D003234 ORTHO05D003635 3.3e-14 82.8 126 44.4
Os03g0669600 Oryza sativa ssp. japonica HOM05D003234 ORTHO05D003635 5.6e-14 82.0 125 44.0
arahy.Tifrunner.gnm1.ann1.F5AS58 Arachis hypogaea HOM05D003234 ORTHO05D003635 9.5e-14 81.3 124 46.0
arahy.Tifrunner.gnm1.ann1.WI3JHU Arachis hypogaea HOM05D003234 ORTHO05D003635 9.5e-14 81.3 124 46.0
Aqoxy6G01093 Aquilegia oxysepala HOM05D003234 ORTHO05D003635 5.2e-12 75.5 126 41.3
MSTRG.1123 Avicennia marina HOM05D003234 ORTHO05D003635 8.9e-12 74.7 157 34.4
Dinv26826 Davidia involucrata HOM05D003234 ORTHO05D003635 1.2e-11 74.3 72 58.3
Medtr3g115080 Medicago truncatula HOM05D003234 ORTHO05D003635 7.5e-11 71.6 125 39.2
Nn6g31830 Nelumbo nucifera HOM05D003234 ORTHO05D003635 7.5e-11 71.6 125 37.6
MSTRG.25294 Avicennia marina HOM05D003234 ORTHO05D003635 9.8e-11 71.2 125 39.2
Lalb_Chr01g0008381 Lupinus albus HOM05D003234 ORTHO05D003635 1.3e-10 70.9 125 39.2
ClCG08G009600 Citrullus lanatus HOM05D003234 ORTHO05D003635 1.7e-10 70.5 125 38.4
Lj1g0024220 Lotus japonicus HOM05D003234 ORTHO05D003635 1.7e-10 70.5 125 39.2
unitig_21.g20148 Utricularia gibba HOM05D003234 ORTHO05D003635 1.7e-10 70.5 125 40.0
Migut.C00924 Erythranthe guttata HOM05D003234 ORTHO05D003635 2.2e-10 70.1 125 39.2
SGA_v2.0_scaffold275G46578 Striga asiatica HOM05D003234 ORTHO05D003635 2.2e-10 70.1 125 38.4
MSTRG.22360 Avicennia marina HOM05D003234 ORTHO05D003635 2.9e-10 69.7 125 39.2
Lalb_Chr19g0131711 Lupinus albus HOM05D003234 ORTHO05D003635 2.9e-10 69.7 125 40.0
Sed0012631 Sechium edule HOM05D003234 ORTHO05D003635 2.9e-10 69.7 125 37.6
arahy.Tifrunner.gnm1.ann1.G2HAI2 Arachis hypogaea HOM05D003234 ORTHO05D003635 3.7e-10 69.3 125 38.4
MELO3C026549.2 Cucumis melo HOM05D003234 ORTHO05D003635 3.7e-10 69.3 127 39.4
CsaV3_6G031700 Cucumis sativus L. HOM05D003234 ORTHO05D003635 3.7e-10 69.3 127 39.4
PGSC0003DMG400029411 Solanum tuberosum HOM05D003234 ORTHO05D003635 3.7e-10 69.3 125 37.6
C02p33350 Brassica napus HOM05D003234 ORTHO05D003635 4.9e-10 68.9 125 36.8
ClCG00G002880 Citrullus lanatus HOM05D003234 ORTHO05D003635 4.9e-10 68.9 126 36.5
Glyma.06G019600 Glycine max HOM05D003234 ORTHO05D003635 4.9e-10 68.9 125 39.2
Gohir.A05G180900 Gossypium hirsutum HOM05D003234 ORTHO05D003635 4.9e-10 68.9 130 36.9
Gohir.D05G183900 Gossypium hirsutum HOM05D003234 ORTHO05D003635 4.9e-10 68.9 130 36.9
Gorai.009G189400 Gossypium raimondii HOM05D003234 ORTHO05D003635 4.9e-10 68.9 130 36.9
Potri.005G248300 Populus trichocarpa HOM05D003234 ORTHO05D003635 4.9e-10 68.9 125 39.2
VMungo1309G2978 Vigna mungo HOM05D003234 ORTHO05D003635 4.9e-10 68.9 125 38.4
A02p20490 Brassica napus HOM05D003234 ORTHO05D003635 6.4e-10 68.6 125 35.2
Hma1.2p1_1260F.1_g271060 Hydrangea macrophylla HOM05D003234 ORTHO05D003635 6.4e-10 68.6 125 36.8
Nitab4.5_0007869g0020 Nicotiana tabacum HOM05D003234 ORTHO05D003635 6.4e-10 68.6 130 36.2
SGA_v2.0_scaffold19G08601 Striga asiatica HOM05D003234 ORTHO05D003635 6.4e-10 68.6 125 40.0
TPR.G38123 Trifolium pratense HOM05D003234 ORTHO05D003635 6.4e-10 68.6 125 37.6
Actinidia37965 Actinidia chinensis HOM05D003234 ORTHO05D003635 8.3e-10 68.2 125 37.6
CARHR020910 Cardamine hirsuta HOM05D003234 ORTHO05D003635 8.3e-10 68.2 125 38.4
CDE02G2075 Ceratophyllum demersum HOM05D003234 ORTHO05D003635 8.3e-10 68.2 126 38.1
Duzib116G0672 Durio zibethinus HOM05D003234 ORTHO05D003635 8.3e-10 68.2 125 37.6
Phvul.009G021200 Phaseolus vulgaris HOM05D003234 ORTHO05D003635 8.3e-10 68.2 126 38.1
Solyc12g094510.2 Solanum lycopersicum HOM05D003234 ORTHO05D003635 8.3e-10 68.2 125 36.8
Sopen12g031400 Solanum pennellii HOM05D003234 ORTHO05D003635 8.3e-10 68.2 125 36.8
arahy.Tifrunner.gnm1.ann1.VFC9DI Arachis hypogaea HOM05D003234 ORTHO05D003635 1.1e-09 67.8 124 37.1
Duzib093G1967 Durio zibethinus HOM05D003234 ORTHO05D003635 1.1e-09 67.8 130 36.9
Glyma.04G019300 Glycine max HOM05D003234 ORTHO05D003635 1.1e-09 67.8 125 38.4
Nitab4.5_0000699g0170 Nicotiana tabacum HOM05D003234 ORTHO05D003635 1.1e-09 67.8 125 36.8
Sed0016414 Sechium edule HOM05D003234 ORTHO05D003635 1.1e-09 67.8 126 38.1
CANSAT25G0014 Cannabis sativa HOM05D003234 ORTHO05D003635 1.4e-09 67.4 125 37.6
CiPaw.08G071600 Carya illinoinensis HOM05D003234 ORTHO05D003635 1.4e-09 67.4 125 36.0
MD15G1003700 Malus domestica HOM05D003234 ORTHO05D003635 1.4e-09 67.4 125 38.4
Carub.0001s1993 Capsella rubella HOM05D003234 ORTHO05D003635 1.9e-09 67.0 125 38.4
CAN.G208.7 Capsicum annuum HOM05D003234 ORTHO05D003635 1.9e-09 67.0 125 36.0
CDE04G0975 Ceratophyllum demersum HOM05D003234 ORTHO05D003635 1.9e-09 67.0 81 48.1
Dinv31919 Davidia involucrata HOM05D003234 ORTHO05D003635 1.9e-09 67.0 125 38.4
Sp5g31330 Schrenkiella parvula HOM05D003234 ORTHO05D003635 1.9e-09 67.0 125 36.8
Thecc.08G055600 Theobroma cacao HOM05D003234 ORTHO05D003635 1.9e-09 67.0 130 38.5
TWI12G0861 Tripterygium wilfordii HOM05D003234 ORTHO05D003635 1.9e-09 67.0 125 36.8
Cpa.g.sc26.223 Carica papaya HOM05D003234 ORTHO05D003635 2.4e-09 66.6 125 37.6
Migut.N03196 Erythranthe guttata HOM05D003234 ORTHO05D003635 2.4e-09 66.6 125 35.2
Eucgr.F03542 Eucalyptus grandis HOM05D003234 ORTHO05D003635 2.4e-09 66.6 125 36.8
Thhalv10009165m.g Eutrema salsugineum HOM05D003234 ORTHO05D003635 2.4e-09 66.6 125 37.6
Gohir.A02G083600 Gossypium hirsutum HOM05D003234 ORTHO05D003635 2.4e-09 66.6 125 36.8
Lalb_Chr08g0246351 Lupinus albus HOM05D003234 ORTHO05D003635 2.4e-09 66.6 126 36.5
Sp1g18170 Schrenkiella parvula HOM05D003234 ORTHO05D003635 2.4e-09 66.6 125 37.6
Aa31LG7G4760 Aethionema arabicum HOM05D003234 ORTHO05D003635 3.2e-09 66.2 125 36.8
BcaC03g15650 Brassica carinata HOM05D003234 ORTHO05D003635 3.2e-09 66.2 125 35.2
BraA02t07080Z Brassica rapa HOM05D003234 ORTHO05D003635 3.2e-09 66.2 125 36.0
Thhalv10019348m.g Eutrema salsugineum HOM05D003234 ORTHO05D003635 3.2e-09 66.2 125 36.8
Nitab4.5_0002710g0120 Nicotiana tabacum HOM05D003234 ORTHO05D003635 3.2e-09 66.2 125 35.2
Psat0s3811g0040 Pisum sativum HOM05D003234 ORTHO05D003635 3.2e-09 66.2 125 39.2
Hund05127 Selenicereus undatus HOM05D003234 ORTHO05D003635 3.2e-09 66.2 125 34.4
THA.LOC104813762 Tarenaya hassleriana HOM05D003234 ORTHO05D003635 3.2e-09 66.2 125 37.6
FAN27G0038 Fragaria x ananassa HOM05D003234 ORTHO05D003635 4.1e-09 65.9 125 38.4
Manes.05G140300 Manihot esculenta HOM05D003234 ORTHO05D003635 4.1e-09 65.9 125 37.6
A07p28600 Brassica napus HOM05D003234 ORTHO05D003635 5.4e-09 65.5 125 36.8
Duzib041G0372 Durio zibethinus HOM05D003234 ORTHO05D003635 5.4e-09 65.5 157 33.8
FAN15G0717 Fragaria x ananassa HOM05D003234 ORTHO05D003635 5.4e-09 65.5 125 39.2
FAN20G3055 Fragaria x ananassa HOM05D003234 ORTHO05D003635 5.4e-09 65.5 125 39.2
Peaxi162Scf00400g00314 Petunia axillaris HOM05D003234 ORTHO05D003635 5.4e-09 65.5 124 33.9
Potri.002G013000 Populus trichocarpa HOM05D003234 ORTHO05D003635 5.4e-09 65.5 125 39.2
Prupe.1G356200 Prunus persica HOM05D003234 ORTHO05D003635 5.4e-09 65.5 125 38.4
RcHm_v2.0_Chr6g0304061 Rosa chinensis HOM05D003234 ORTHO05D003635 5.4e-09 65.5 125 39.2
AT1G20460 Arabidopsis thaliana HOM05D003234 ORTHO05D003635 7.0e-09 65.1 125 37.6
MD08G1004300 Malus domestica HOM05D003234 ORTHO05D003635 7.0e-09 65.1 125 37.6
QL02p013773 Quercus lobata HOM05D003234 ORTHO05D003635 7.0e-09 65.1 130 38.5
FvH4_2g37670 Fragaria vesca HOM05D003234 ORTHO05D003635 9.2e-09 64.7 125 39.2
Gohir.D02G099100 Gossypium hirsutum HOM05D003234 ORTHO05D003635 9.2e-09 64.7 125 36.0
Gorai.005G112900 Gossypium raimondii HOM05D003234 ORTHO05D003635 9.2e-09 64.7 125 36.0
BcaB02g07054 Brassica carinata HOM05D003234 ORTHO05D003635 1.2e-08 64.3 125 36.8
BcaB07g32048 Brassica carinata HOM05D003234 ORTHO05D003635 1.2e-08 64.3 125 36.8
BcaC05g25956 Brassica carinata HOM05D003234 ORTHO05D003635 1.2e-08 64.3 125 36.8
A06p16500 Brassica napus HOM05D003234 ORTHO05D003635 1.2e-08 64.3 125 36.8
C05p19050 Brassica napus HOM05D003234 ORTHO05D003635 1.2e-08 64.3 125 36.8
BraA06t24756Z Brassica rapa HOM05D003234 ORTHO05D003635 1.2e-08 64.3 125 36.8
Gohir.D05G256400 Gossypium hirsutum HOM05D003234 ORTHO05D003635 1.2e-08 64.3 125 35.2
Nitab4.5_0000337g0170 Nicotiana tabacum HOM05D003234 ORTHO05D003635 1.2e-08 64.3 125 34.4
Nitab4.5_0000588g0270 Nicotiana tabacum HOM05D003234 ORTHO05D003635 1.2e-08 64.3 125 38.4
Peaxi162Scf00515g00521 Petunia axillaris HOM05D003234 ORTHO05D003635 1.2e-08 64.3 70 52.9
Sc02g0009000 Simmondsia chinensis HOM05D003234 ORTHO05D003635 1.2e-08 64.3 125 36.0
THA.LOC104809745 Tarenaya hassleriana HOM05D003234 ORTHO05D003635 1.2e-08 64.3 125 36.8
vmacro21831 Vaccinium macrocarpon HOM05D003234 ORTHO05D003635 1.2e-08 64.3 147 34.0
BcaC08g47113 Brassica carinata HOM05D003234 ORTHO05D003635 1.6e-08 63.9 125 36.0
Carub.0002s2308 Capsella rubella HOM05D003234 ORTHO05D003635 1.6e-08 63.9 125 36.0
PGR031G2527 Punica granatum HOM05D003234 ORTHO05D003635 1.6e-08 63.9 125 36.0
AT1G76185 Arabidopsis thaliana HOM05D003234 ORTHO05D003635 2.0e-08 63.5 125 36.0
CiPaw.07G140700 Carya illinoinensis HOM05D003234 ORTHO05D003635 2.0e-08 63.5 125 35.2
Gorai.009G267900 Gossypium raimondii HOM05D003234 ORTHO05D003635 2.0e-08 63.5 125 35.2
QL06p045796 Quercus lobata HOM05D003234 ORTHO05D003635 2.0e-08 63.5 36 80.6
SalBow6G3231 Salvia bowleyana HOM05D003234 ORTHO05D003635 2.0e-08 63.5 125 36.8
SHI08007 Sapria himalayana HOM05D003234 ORTHO05D003635 2.0e-08 63.5 133 36.8
Gohir.A05G254800 Gossypium hirsutum HOM05D003234 ORTHO05D003635 2.7e-08 63.2 125 34.4
BNapus_Darmor_BZH_scaffold_170p00030 Brassica napus HOM05D003234 ORTHO05D003635 3.5e-08 62.8 125 36.8
Ciclev10002915m.g Citrus clementina HOM05D003234 ORTHO05D003635 3.5e-08 62.8 125 36.0
Rhsim06G0008900 Rhododendron simsii HOM05D003234 ORTHO05D003635 3.5e-08 62.8 125 36.8
Cc10_g00860 Coffea canephora HOM05D003234 ORTHO05D003635 4.6e-08 62.4 125 35.2
Lalb_Chr11g0061721 Lupinus albus HOM05D003234 ORTHO05D003635 4.6e-08 62.4 125 35.2
Manes.18G007200 Manihot esculenta HOM05D003234 ORTHO05D003635 4.6e-08 62.4 125 36.0
C06p32180 Brassica napus HOM05D003234 ORTHO05D003635 6.0e-08 62.0 125 35.2
Oeu011320.1 Olea europaea HOM05D003234 ORTHO05D003635 6.0e-08 62.0 125 36.8
Actinidia15481 Actinidia chinensis HOM05D003234 ORTHO05D003635 1.3e-07 60.8 127 36.2
CDE02G3043 Ceratophyllum demersum HOM05D003234 ORTHO05D003635 1.3e-07 60.8 72 48.6
Peaxi162Scf01481g00038 Petunia axillaris HOM05D003234 ORTHO05D003635 1.3e-07 60.8 131 36.6
unitig_744.g24608 Utricularia gibba HOM05D003234 ORTHO05D003635 1.3e-07 60.8 126 32.5
vmacro04393 Vaccinium macrocarpon HOM05D003234 ORTHO05D003635 1.3e-07 60.8 125 36.0
GSVIVG01008697001 Vitis vinifera HOM05D003234 ORTHO05D003635 1.3e-07 60.8 125 35.2
Solyc04g082210.3 Solanum lycopersicum HOM05D003234 ORTHO05D003635 3.0e-07 59.7 125 36.0
BraA07t30501Z Brassica rapa HOM05D003234 ORTHO05D003635 3.9e-07 59.3 125 36.0
HanXRQChr12g0366591 Helianthus annuus HOM05D003234 ORTHO05D003635 3.9e-07 59.3 124 33.9
Lsat_1_v5_gn_8_27741 Lactuca sativa HOM05D003234 ORTHO05D003635 6.6e-07 58.5 123 33.3
EL10Ac1g02011 Beta vulgaris HOM05D003234 ORTHO05D003635 8.6e-07 58.2 125 32.8
Sopen04g035840 Solanum pennellii HOM05D003234 ORTHO05D003635 8.6e-07 58.2 125 35.2
CAN.G311.99 Capsicum annuum HOM05D003234 ORTHO05D003635 1.1e-06 57.8 125 36.0
HanXRQChr14g0428701 Helianthus annuus HOM05D003234 ORTHO05D003635 1.1e-06 57.8 124 34.7
Lsat_1_v5_gn_5_39760 Lactuca sativa HOM05D003234 ORTHO05D003635 1.1e-06 57.8 124 34.7
Os03g0227500 Oryza sativa ssp. japonica HOM05D003234 ORTHO05D003635 1.1e-06 57.8 70 48.6
PGSC0003DMG401009896 Solanum tuberosum HOM05D003234 ORTHO05D003635 1.1e-06 57.8 125 35.2
MBI05_g27809_MAGBIO Magnolia biondii HOM05D003234 ORTHO05D003635 1.5e-06 57.4 124 36.3
Manes.02G093000 Manihot esculenta HOM05D003234 ORTHO05D003635 2.5e-06 56.6 36 72.2
CDE09G0257 Ceratophyllum demersum HOM05D003234 ORTHO05D003635 3.3e-06 56.2 173 30.1
TAR381G0421 Trochodendron aralioides HOM05D003234 ORTHO05D003635 3.3e-06 56.2 70 51.4


User provided reference genes

Program Settings