Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 1.7e-68 262.7 146 100.0
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 2.0e-24 116.3 154 55.8
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 1.4e-22 110.2 148 50.7
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 3.1e-22 109.0 147 49.7
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 9.1e-22 107.5 147 54.4
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 1.2e-21 107.1 148 46.6
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 5.5e-19 98.2 140 47.9
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.6e-18 96.7 142 49.3
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 6.1e-18 94.7 146 49.3
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 1.8e-17 93.2 142 50.7
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 3.0e-17 92.4 176 45.5
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 1.5e-16 90.1 144 47.2
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 2.0e-16 89.7 143 47.6
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 7.4e-16 87.8 72 69.4
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 9.7e-16 87.4 147 44.2
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 2.8e-15 85.9 71 66.2
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 2.8e-15 85.9 140 45.7
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 8.2e-15 84.3 146 42.5
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 1.1e-14 84.0 110 50.9
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 5.3e-14 81.6 149 42.3
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 7.0e-14 81.3 151 45.0
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 3.5e-13 79.0 109 49.5
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 4.5e-13 78.6 147 42.2
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 5.9e-13 78.2 143 42.0
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 1.0e-12 77.4 152 42.1
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 1.0e-12 77.4 63 68.3
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 1.0e-12 77.4 147 39.5
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 1.3e-12 77.0 147 36.7
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 1.3e-12 77.0 101 48.5
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 2.2e-12 76.3 56 71.4
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 2.9e-12 75.9 116 51.7
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 2.9e-12 75.9 143 39.2
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 3.8e-12 75.5 147 36.1
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 3.8e-12 75.5 140 40.0
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 3.8e-12 75.5 142 38.0
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 5.0e-12 75.1 67 64.2
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 6.5e-12 74.7 145 44.1
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 8.5e-12 74.3 114 47.4
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 8.5e-12 74.3 119 43.7
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 8.5e-12 74.3 77 58.4
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.1e-11 73.9 142 40.8
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 1.5e-11 73.6 145 40.7
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 1.5e-11 73.6 87 54.0
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 1.5e-11 73.6 138 44.2
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 1.9e-11 73.2 74 59.5
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.9e-11 73.2 141 39.7
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 1.9e-11 73.2 146 39.0
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 1.9e-11 73.2 134 42.5
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 1.9e-11 73.2 144 44.4
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 2.5e-11 72.8 145 44.8
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 2.5e-11 72.8 141 43.3
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 3.2e-11 72.4 64 64.1
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 3.2e-11 72.4 64 64.1
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 4.2e-11 72.0 113 46.0
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 4.2e-11 72.0 138 43.5
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 5.5e-11 71.6 66 63.6
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 5.5e-11 71.6 141 36.9
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 7.2e-11 71.2 144 41.0
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 9.4e-11 70.9 114 50.0
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 9.4e-11 70.9 141 39.0
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 9.4e-11 70.9 64 57.8
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 1.6e-10 70.1 142 40.8
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 1.6e-10 70.1 142 40.8
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 1.6e-10 70.1 143 41.3
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 1.6e-10 70.1 146 37.0
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 1.6e-10 70.1 93 50.5
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 2.1e-10 69.7 142 40.8
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 2.7e-10 69.3 86 51.2
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 3.6e-10 68.9 119 42.9
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 3.6e-10 68.9 132 42.4
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.6e-10 68.9 132 42.4
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 3.6e-10 68.9 93 50.5
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 3.6e-10 68.9 142 35.9
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 4.7e-10 68.6 115 42.6
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 6.1e-10 68.2 140 37.9
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 8.0e-10 67.8 147 39.5
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 8.0e-10 67.8 67 55.2
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 8.0e-10 67.8 132 40.9
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 1.0e-09 67.4 144 39.6
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 1.4e-09 67.0 142 40.1
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 1.4e-09 67.0 142 40.1
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 1.8e-09 66.6 114 43.0
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 1.8e-09 66.6 114 43.0
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 1.8e-09 66.6 72 55.6
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 2.3e-09 66.2 145 38.6
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 2.3e-09 66.2 149 39.6
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 3.0e-09 65.9 119 39.5
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 4.0e-09 65.5 111 42.3
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 5.2e-09 65.1 71 56.3
CSS0029658 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 6.7e-09 64.7 120 40.0
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 6.7e-09 64.7 77 53.2
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 8.8e-09 64.3 88 45.5
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 1.2e-08 63.9 67 53.7
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 2.6e-08 62.8 114 40.4
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 4.4e-08 62.0 147 37.4
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 5.7e-08 61.6 144 38.2
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 5.7e-08 61.6 61 55.7
CSS0018588 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 7.5e-08 61.2 150 42.0
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 7.5e-08 61.2 144 39.6
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 1.3e-07 60.5 116 43.1
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 1.3e-07 60.5 64 59.4
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.2e-07 59.7 120 43.3
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 2.2e-07 59.7 82 43.9
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 2.8e-07 59.3 92 45.7
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 2.8e-07 59.3 123 38.2
EL10Ac6g15568 Beta vulgaris HOM05D006100 ORTHO05D007539 4.8e-07 58.5 143 39.2
AUR62007561 Chenopodium quinoa HOM05D006100 ORTHO05D007539 8.2e-07 57.8 145 38.6
SalBow5G1753 Salvia bowleyana HOM05D006100 ORTHO05D007539 1.4e-06 57.0 127 37.8
CDE01G0731 Ceratophyllum demersum HOM05D006100 ORTHO05D007539 5.3e-06 55.1 126 37.3


User provided reference genes

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