Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold276G46611 Striga asiatica HOM05D000010 ORTHO05D399031 5.6e-77 290.8 141 100.0
SGA_v2.0_scaffold553G52893 Striga asiatica HOM05D000010 ORTHO05D004316 9.1e-11 70.9 195 30.8
Lsat_1_v5_gn_6_99960 Lactuca sativa HOM05D000010 ORTHO05D004316 1.9e-08 63.2 212 25.9
SGA_v2.0_scaffold288G47245 Striga asiatica HOM05D000010 ORTHO05D004316 4.2e-08 62.0 72 50.0
Manes.02G186500 Manihot esculenta HOM05D000010 ORTHO05D004316 2.1e-07 59.7 196 27.0
SalBow6G0248 Salvia bowleyana HOM05D000010 ORTHO05D004316 3.6e-07 58.9 72 43.1
Gohir.D05G248900 Gossypium hirsutum HOM05D000010 ORTHO05D004316 6.1e-07 58.2 63 46.0
Oeu027224.1 Olea europaea HOM05D000010 ORTHO05D004316 6.1e-07 58.2 204 27.5
Migut.H00826 Erythranthe guttata HOM05D000010 ORTHO05D000151 8.0e-07 57.8 57 47.4
COL.COLO4_05235 Corchorus olitorius HOM05D000273 ORTHO05D004316 1.0e-06 57.4 63 46.0
Lj7A387G68 Lonicera japonica HOM05D000010 ORTHO05D004316 1.0e-06 57.4 188 26.6
Mapoly0175s0015 Marchantia polymorpha HOM05D000010 ORTHO05D000865 1.0e-06 57.4 64 50.0
Cpa.g.sc26.135 Carica papaya HOM05D000010 ORTHO05D004316 1.4e-06 57.0 74 43.2
Lj4A706T79 Lonicera japonica HOM05D000010 ORTHO05D004316 1.4e-06 57.0 64 43.8
Ca_16996_v3 Cicer arietinum L. HOM05D000010 ORTHO05D000151 1.8e-06 56.6 57 47.4
Ca_17024_v3 Cicer arietinum L. HOM05D000010 ORTHO05D000151 1.8e-06 56.6 57 47.4
TPR.G7857 Trifolium pratense HOM05D000010 ORTHO05D000151 1.8e-06 56.6 57 47.4
Hund07220 Selenicereus undatus HOM05D000010 ORTHO05D000151 2.3e-06 56.2 67 41.8
vmacro12762 Vaccinium macrocarpon HOM05D000010 ORTHO05D000151 2.3e-06 56.2 73 41.1
CANSAT25G3469 Cannabis sativa HOM05D000010 ORTHO05D004316 3.0e-06 55.8 58 50.0
Migut.N02932 Erythranthe guttata HOM05D000010 ORTHO05D004316 3.0e-06 55.8 72 43.1
Medtr3g096920 Medicago truncatula HOM05D000010 ORTHO05D000151 3.0e-06 55.8 57 47.4
Psat5g058640 Pisum sativum HOM05D000010 ORTHO05D000151 3.0e-06 55.8 57 47.4
ECA246G2771 Erigeron canadensis HOM05D000010 ORTHO05D004316 4.0e-06 55.5 177 26.0
Peaxi162Scf00226g00319 Petunia axillaris HOM05D000010 ORTHO05D004316 4.0e-06 55.5 150 27.3
CANSAT25G0087 Cannabis sativa HOM05D000010 ORTHO05D004316 5.2e-06 55.1 58 48.3
CAN.G1861.9 Capsicum annuum HOM05D000010 ORTHO05D000151 5.2e-06 55.1 57 47.4
CsaV3_4G032010 Cucumis sativus L. HOM05D000010 ORTHO05D000865 5.2e-06 55.1 70 35.7
Dinv16673 Davidia involucrata HOM05D000010 ORTHO05D000151 5.2e-06 55.1 57 47.4
ECA232G2455 Erigeron canadensis HOM05D000001 ORTHO05D009971 5.2e-06 55.1 51 49.0
Gohir.A02G061700 Gossypium hirsutum HOM05D000010 ORTHO05D004316 5.2e-06 55.1 63 46.0
Gohir.A05G247400 Gossypium hirsutum HOM05D000010 ORTHO05D004316 5.2e-06 55.1 63 44.4
Gorai.009G260000 Gossypium raimondii HOM05D000010 ORTHO05D004316 5.2e-06 55.1 63 44.4
MBI01_g15046_MAGBIO Magnolia biondii HOM05D000010 ORTHO05D000865 5.2e-06 55.1 62 48.4
MD05G1037700 Malus domestica HOM05D000010 ORTHO05D004316 5.2e-06 55.1 182 26.4
QL02p035310 Quercus lobata HOM05D000010 ORTHO05D004316 5.2e-06 55.1 143 27.3
QL02p036691 Quercus lobata HOM05D000010 ORTHO05D004316 5.2e-06 55.1 143 27.3
unitig_578.g16215 Utricularia gibba HOM05D000010 ORTHO05D004316 5.2e-06 55.1 72 43.1
vmacro21202 Vaccinium macrocarpon HOM05D000010 ORTHO05D004316 5.2e-06 55.1 204 26.0
MSTRG.15258 Avicennia marina HOM05D000010 ORTHO05D000151 6.7e-06 54.7 57 47.4
MSTRG.23489 Avicennia marina HOM05D000010 ORTHO05D000151 6.7e-06 54.7 57 49.1
MSTRG.24485 Avicennia marina HOM05D000010 ORTHO05D004316 6.7e-06 54.7 72 41.7
FAN26G2401 Fragaria x ananassa HOM05D000010 ORTHO05D000151 6.7e-06 54.7 63 42.9
Glyma.06G157400 Glycine max HOM05D000010 ORTHO05D000151 6.7e-06 54.7 57 45.6
Lalb_Chr06g0161851 Lupinus albus HOM05D000010 ORTHO05D004316 6.7e-06 54.7 68 45.6
Solyc04g009440.3 Solanum lycopersicum HOM05D000010 ORTHO05D000151 6.7e-06 54.7 57 45.6
Sopen04g004570 Solanum pennellii HOM05D000010 ORTHO05D000151 6.7e-06 54.7 57 45.6
TWI79G0112 Tripterygium wilfordii HOM05D000010 ORTHO05D000151 6.7e-06 54.7 57 45.6
VMungo0720G0429 Vigna mungo HOM05D000010 ORTHO05D004316 6.7e-06 54.7 173 27.7
CiPaw.16G026000 Carya illinoinensis HOM05D000010 ORTHO05D000151 8.8e-06 54.3 58 48.3
Lalb_Chr21g0305651 Lupinus albus HOM05D000010 ORTHO05D004316 8.8e-06 54.3 184 27.2
Solyc12g056790.2 Solanum lycopersicum HOM05D000010 ORTHO05D004316 8.8e-06 54.3 201 24.9


User provided reference genes

Program Settings