Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 3.7e-246 854.4 415 100.0
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 8.7e-187 657.1 427 77.0
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 1.3e-185 653.3 333 92.8
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 3.4e-183 645.2 424 75.2
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 1.3e-177 626.7 419 74.2
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 2.4e-176 622.5 414 72.9
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 3.0e-171 605.5 448 67.2
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 6.7e-171 604.4 428 69.2
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 2.6e-167 592.4 371 74.9
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 6.1e-164 581.3 432 65.0
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 2.6e-162 575.9 424 66.0
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 1.8e-155 553.1 413 67.1
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 1.8e-155 553.1 445 62.0
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 7.5e-154 547.7 434 61.3
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 2.0e-151 539.7 422 62.8
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 2.7e-151 539.3 416 64.7
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.1e-149 533.9 434 59.9
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 5.5e-149 531.6 414 63.0
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.2e-148 530.4 392 65.6
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 1.6e-148 530.0 444 59.7
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 2.1e-148 529.6 415 63.4
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 2.7e-148 529.3 429 60.1
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 3.6e-148 528.9 414 63.0
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 1.0e-147 527.3 439 61.5
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 1.8e-147 526.6 423 60.0
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 1.8e-147 526.6 414 63.0
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 4.0e-147 525.4 429 61.8
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 6.8e-147 524.6 423 60.0
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 8.8e-147 524.2 426 60.3
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 8.8e-147 524.2 409 62.8
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 4.4e-146 521.9 435 60.2
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 4.4e-146 521.9 423 60.3
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 4.4e-146 521.9 423 59.6
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 7.5e-146 521.2 409 62.6
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 7.5e-146 521.2 426 60.6
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 2.2e-145 519.6 420 61.7
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 2.8e-145 519.2 409 62.1
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 8.3e-145 517.7 446 58.5
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 8.3e-145 517.7 375 63.5
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 1.1e-144 517.3 353 68.6
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 4.1e-144 515.4 405 60.0
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 5.4e-144 515.0 427 60.4
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 5.4e-144 515.0 417 60.4
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 7.0e-144 514.6 367 66.2
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 1.6e-143 513.5 419 61.8
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 2.0e-143 513.1 353 67.1
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 2.7e-143 512.7 367 66.2
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 3.5e-143 512.3 408 61.0
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 4.5e-143 511.9 420 61.2
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 5.9e-143 511.5 348 67.8
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 1.7e-142 510.0 420 58.8
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 2.3e-142 509.6 436 58.9
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 5.0e-142 508.4 410 62.7
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 6.6e-142 508.1 353 66.3
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 6.6e-142 508.1 353 67.1
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 8.6e-142 507.7 401 62.6
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 8.6e-142 507.7 401 62.6
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 8.6e-142 507.7 401 62.6
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.9e-141 506.5 362 65.7
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 1.9e-141 506.5 416 60.1
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 3.3e-141 505.8 448 55.8
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 4.3e-141 505.4 427 59.3
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 5.6e-141 505.0 401 62.1
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 7.3e-141 504.6 426 58.5
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 9.5e-141 504.2 419 59.4
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 1.6e-140 503.4 347 66.9
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 2.1e-140 503.1 421 59.6
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 2.1e-140 503.1 416 58.2
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 3.6e-140 502.3 401 62.1
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 3.6e-140 502.3 450 57.1
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 3.6e-140 502.3 349 65.9
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 4.7e-140 501.9 419 58.2
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 6.1e-140 501.5 416 57.9
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 8.0e-140 501.1 414 60.6
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 1.4e-139 500.4 389 61.4
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 3.0e-139 499.2 353 65.4
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 3.0e-139 499.2 414 60.4
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 4.0e-139 498.8 345 67.5
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 6.8e-139 498.0 409 59.2
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 8.9e-139 497.7 345 66.1
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 2.0e-138 496.5 418 57.7
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 2.6e-138 496.1 423 59.8
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 2.6e-138 496.1 344 67.4
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 3.4e-138 495.7 418 57.2
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 3.4e-138 495.7 419 59.4
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 3.4e-138 495.7 409 58.4
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 5.7e-138 495.0 384 63.0
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 9.8e-138 494.2 407 60.2
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 1.3e-137 493.8 438 57.5
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 1.3e-137 493.8 408 58.1
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 2.2e-137 493.0 416 57.7
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 2.9e-137 492.7 414 57.0
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 3.7e-137 492.3 420 58.8
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 4.9e-137 491.9 413 58.4
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 4.9e-137 491.9 381 61.7
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.1e-136 490.7 413 58.1
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 3.2e-136 489.2 415 59.3
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 3.2e-136 489.2 415 59.3
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 3.2e-136 489.2 415 59.3
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 2.0e-135 486.5 424 56.4
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 7.8e-135 484.6 430 56.5
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.3e-134 483.8 416 56.5
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 2.3e-134 483.0 395 59.7
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 3.9e-134 482.3 400 58.5
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 1.1e-133 480.7 425 55.8
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 2.5e-133 479.6 406 56.4
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 4.3e-133 478.8 413 57.4
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 4.3e-133 478.8 390 58.2
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 5.6e-133 478.4 399 57.4
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 3.4e-130 469.2 418 55.3
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 3.7e-129 465.7 414 55.8
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 3.7e-129 465.7 315 70.2
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 4.9e-129 465.3 392 57.4
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 6.4e-129 464.9 410 55.4
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 6.4e-129 464.9 405 55.6
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 6.4e-129 464.9 348 61.5
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 7.8e-127 458.0 400 55.5
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.7e-126 456.8 421 54.2
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 8.1e-124 448.0 341 60.1
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 8.9e-123 444.5 423 54.1
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 1.2e-122 444.1 403 55.3
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 7.5e-122 441.4 446 53.1
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 7.5e-122 441.4 404 55.4
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 3.7e-121 439.1 391 55.5
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 8.3e-121 438.0 344 58.1
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 8.3e-121 438.0 362 60.2
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 1.4e-120 437.2 344 60.5
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 4.1e-120 435.6 421 51.8
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 1.2e-119 434.1 408 53.7
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 1.7e-118 430.3 422 52.1
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 2.3e-118 429.9 289 66.4
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 3.0e-118 429.5 382 56.5
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 3.3e-117 426.0 417 52.0
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 1.2e-116 424.1 356 58.4
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 1.1e-115 421.0 339 59.3
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 2.3e-115 419.9 409 52.8
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 4.1e-112 409.1 310 60.6
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.1e-111 406.8 396 51.3
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 6.0e-111 405.2 438 48.4
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 5.1e-110 402.1 349 55.3
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 1.1e-109 401.0 405 49.9
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.5e-109 399.8 391 50.9
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 3.8e-105 386.0 347 52.7
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 6.4e-105 385.2 405 48.9
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 8.4e-105 384.8 435 48.0
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 1.1e-104 384.4 250 68.4
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 5.1e-102 375.6 344 51.5
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 4.8e-100 369.0 305 56.4
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 4.5e-98 362.5 269 60.6
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.1e-93 347.8 342 48.8
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 4.3e-93 345.9 244 65.2
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 3.6e-92 342.8 240 65.4
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 1.8e-91 340.5 352 45.5
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 3.1e-91 339.7 343 47.8
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 5.3e-91 339.0 352 47.4
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.0e-86 324.7 350 47.1
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 1.9e-85 320.5 237 59.9
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 4.5e-82 309.3 286 59.1
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 2.2e-81 307.0 439 41.9
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.1e-76 290.4 355 41.4
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 2.8e-76 290.0 237 54.4
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.8e-76 290.0 346 40.2
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 3.7e-76 289.7 301 45.8
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 5.3e-75 285.8 339 42.2
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 5.9e-74 282.3 350 40.6
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 3.8e-73 279.6 241 53.9
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 6.5e-73 278.9 363 39.9
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.3e-70 271.2 340 40.6
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 6.5e-65 252.3 342 38.6
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 3.0e-62 243.4 357 39.2
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 2.9e-41 173.7 152 59.2
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 3.6e-39 166.8 415 30.6
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 1.5e-37 161.4 154 53.2
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 4.7e-23 113.2 114 45.6
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 9.2e-19 99.0 85 49.4
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 8.6e-17 92.4 100 42.0
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.1e-16 92.0 121 38.8
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 6.2e-15 86.3 79 44.3
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 5.4e-11 73.2 142 40.8
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.3e-09 68.6 121 41.3
ATR0555G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 5.6e-08 63.2 67 35.8


User provided reference genes

Program Settings