Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold275G46576 Striga asiatica HOM05D014976 ORTHO05D005639 1.6e-73 280.0 222 100.0
MSTRG.24222 Avicennia marina HOM05D014976 ORTHO05D005639 9.9e-20 101.3 230 63.0
Oeu046328.1 Olea europaea HOM05D014976 ORTHO05D005639 2.7e-17 93.2 245 58.0
Manes.05G140400 Manihot esculenta HOM05D008201 ORTHO05D005639 1.1e-15 87.8 148 60.1
SalBow7G0401 Salvia bowleyana HOM05D008201 ORTHO05D005639 2.5e-15 86.7 224 56.7
Peaxi162Scf00174g01621 Petunia axillaris HOM05D014976 ORTHO05D005639 3.3e-15 86.3 212 57.1
Sopen04g035830 Solanum pennellii HOM05D014976 ORTHO05D005639 4.3e-15 85.9 195 59.0
Oeu016882.1 Olea europaea HOM05D008201 ORTHO05D005639 7.3e-15 85.1 226 56.2
Cc10_g00870 Coffea canephora HOM05D014976 ORTHO05D005639 2.8e-14 83.2 217 58.5
Nitab4.5_0000588g0250 Nicotiana tabacum HOM05D014976 ORTHO05D005639 2.8e-14 83.2 137 56.2
CAN.G311.98 Capsicum annuum HOM05D014976 ORTHO05D005639 6.2e-14 82.0 225 53.3
PGSC0003DMG400009968 Solanum tuberosum HOM05D014976 ORTHO05D005639 1.1e-13 81.3 202 56.9
HanXRQChr08g0216051 Helianthus annuus HOM05D008201 ORTHO05D005639 2.6e-12 76.6 153 54.9
Gohir.A05G181000 Gossypium hirsutum HOM05D008201 ORTHO05D005639 8.4e-11 71.6 141 59.6
Gorai.009G189500 Gossypium raimondii HOM05D008201 ORTHO05D005639 8.4e-11 71.6 141 58.9
SalBow6G7161 Salvia bowleyana HOM05D014976 ORTHO05D005639 2.4e-10 70.1 224 47.3
Lsat_1_v5_gn_8_27820 Lactuca sativa HOM05D008201 ORTHO05D005639 7.1e-10 68.6 147 55.1
Duzib116G0781 Durio zibethinus HOM05D008201 ORTHO05D005639 1.8e-08 63.9 191 57.1
MSTRG.1124 Avicennia marina HOM05D008201 ORTHO05D005639 5.1e-08 62.4 227 50.7
CiPaw.08G071500 Carya illinoinensis HOM05D008201 ORTHO05D005639 1.1e-07 61.2 123 58.5
TAR376G0148 Trochodendron aralioides HOM05D008201 ORTHO05D005639 1.1e-07 61.2 162 50.0
Glyma.04G009400 Glycine max HOM05D008201 ORTHO05D005639 1.5e-07 60.8 227 56.4
Ciclev10002349m.g Citrus clementina HOM05D008201 ORTHO05D005639 2.5e-07 60.1 139 58.3
Potri.005G248100 Populus trichocarpa HOM05D008201 ORTHO05D005639 4.3e-07 59.3 230 50.0
Aqoxy6G01838 Aquilegia oxysepala HOM05D008201 ORTHO05D005639 5.6e-07 58.9 231 42.4
CSS0003901 Camellia sinensis var. sinensis HOM05D008201 ORTHO05D005639 9.6e-07 58.2 178 50.6


User provided reference genes

Program Settings