Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold275G46573 Striga asiatica HOM05D007700 ORTHO05D009669 6.2e-128 461.8 474 100.0
Migut.C00922 Erythranthe guttata HOM05D007700 ORTHO05D009669 4.0e-79 299.7 244 66.8
SalBow7G3569 Salvia bowleyana HOM05D007700 ORTHO05D009669 1.3e-72 278.1 237 60.8
MSTRG.1126 Avicennia marina HOM05D007700 ORTHO05D009669 3.0e-58 230.3 227 54.6
Solyc02g082970.1 Solanum lycopersicum HOM05D007700 ORTHO05D009669 2.8e-56 223.8 239 55.6
Sopen02g027760 Solanum pennellii HOM05D007700 ORTHO05D009669 2.8e-56 223.8 238 55.9
Dinv40165 Davidia involucrata HOM05D007700 ORTHO05D009669 3.1e-55 220.3 246 52.0
PGSC0003DMG400040241 Solanum tuberosum HOM05D007700 ORTHO05D009669 3.1e-55 220.3 238 54.6
Cc00_g14260 Coffea canephora HOM05D007700 ORTHO05D009669 1.9e-52 211.1 238 51.7
TAR625G0909 Trochodendron aralioides HOM05D007700 ORTHO05D009669 8.8e-50 202.2 236 49.2
Actinidia22918 Actinidia chinensis HOM05D007700 ORTHO05D009669 8.2e-48 195.7 239 47.7
Rhsim10G0201800 Rhododendron simsii HOM05D000242 ORTHO05D009669 1.2e-46 191.8 180 55.6
QL06p052538 Quercus lobata HOM05D007700 ORTHO05D009669 1.6e-46 191.4 234 50.4
Rhsim10G0203000 Rhododendron simsii HOM05D000242 ORTHO05D009669 4.5e-46 189.9 174 56.3
CiPaw.07G004600 Carya illinoinensis HOM05D007700 ORTHO05D009669 5.9e-46 189.5 232 47.4
PGR119G0746 Punica granatum HOM05D007700 ORTHO05D009669 1.0e-45 188.7 244 45.1
Ca_23118_v3 Cicer arietinum L. HOM05D007700 ORTHO05D009669 2.2e-45 187.6 238 45.4
Lj2P490T20 Lonicera japonica HOM05D007700 ORTHO05D009669 2.9e-45 187.2 239 46.4
Haze_03682 Corylus avellana HOM05D006745 ORTHO05D008449 2.5e-44 184.1 240 46.7
Nn6g31772 Nelumbo nucifera HOM05D007700 ORTHO05D009669 2.5e-44 184.1 240 47.1
vmacro20514 Vaccinium macrocarpon HOM05D007700 ORTHO05D009669 2.5e-44 184.1 169 54.4
CANSAT25G3310 Cannabis sativa HOM05D007700 ORTHO05D009669 4.2e-44 183.3 238 45.8
Eucgr.I02272 Eucalyptus grandis HOM05D007700 ORTHO05D009669 9.4e-44 182.2 243 45.7
Cfa007052 Carpinus fangiana HOM05D007700 ORTHO05D009669 1.2e-43 181.8 244 45.5
Thecc.01G008500 Theobroma cacao HOM05D007700 ORTHO05D009669 1.2e-43 181.8 238 46.6
Gorai.003G004000 Gossypium raimondii HOM05D007700 ORTHO05D009669 2.7e-43 180.6 238 45.4
TPR.G28737 Trifolium pratense HOM05D007700 ORTHO05D009669 4.7e-43 179.9 235 43.0
Gohir.D03G003800 Gossypium hirsutum HOM05D007700 ORTHO05D009669 1.0e-42 178.7 238 45.4
Psat4g208920 Pisum sativum HOM05D007700 ORTHO05D009669 5.2e-42 176.4 241 41.5
arahy.Tifrunner.gnm1.ann1.PXC5PH Arachis hypogaea HOM05D007700 ORTHO05D009669 8.8e-42 175.6 246 43.5
arahy.Tifrunner.gnm1.ann1.HE2L98 Arachis hypogaea HOM05D007700 ORTHO05D009669 1.2e-41 175.3 246 45.9
Medtr8g005870 Medicago truncatula HOM05D007700 ORTHO05D009669 1.2e-41 175.3 240 42.5
Manes.01G153300 Manihot esculenta HOM05D007700 ORTHO05D009669 2.0e-41 174.5 243 46.1
Atru.chr3.942 Acer truncatum HOM05D007700 ORTHO05D009669 4.4e-41 173.3 235 45.5
THA.LOC104804288 Tarenaya hassleriana HOM05D007700 ORTHO05D009669 9.7e-41 172.2 242 42.6
Potri.005G103300 Populus trichocarpa HOM05D007700 ORTHO05D009669 6.3e-40 169.5 239 46.4
Aa31LG8G14930 Aethionema arabicum HOM05D007700 ORTHO05D009669 1.1e-39 168.7 232 43.1
Lj3g0022870 Lotus japonicus HOM05D007700 ORTHO05D009669 1.8e-39 167.9 239 41.8
Peaxi162Scf01310g10029 Petunia axillaris HOM05D007700 ORTHO05D009669 2.4e-39 167.5 238 47.1
AL3G50640 Arabidopsis lyrata HOM05D007700 ORTHO05D009669 3.1e-39 167.2 239 41.4
AT2G17670 Arabidopsis thaliana HOM05D007700 ORTHO05D009669 4.1e-39 166.8 238 42.4
Thhalv10022683m.g Eutrema salsugineum HOM05D007700 ORTHO05D009669 1.6e-38 164.9 235 43.0
VMungo0331G0753 Vigna mungo HOM05D007700 ORTHO05D009669 1.6e-38 164.9 246 41.5
Sabra05G0085500 Salix brachista HOM05D007700 ORTHO05D009669 2.0e-38 164.5 233 44.2
CARHR107900 Cardamine hirsuta HOM05D007700 ORTHO05D009669 2.7e-38 164.1 239 42.7
Carub.0003s3177 Capsella rubella HOM05D007700 ORTHO05D009669 1.0e-37 162.2 238 41.2
ClCG01G020760 Citrullus lanatus HOM05D007700 ORTHO05D009669 2.2e-37 161.0 235 42.6
MBI05_g43154_MAGBIO Magnolia biondii HOM05D007700 ORTHO05D009669 2.2e-37 161.0 232 43.5
BolC9t54240H Brassica oleracea HOM05D007700 ORTHO05D009669 8.5e-37 159.1 238 40.3
C09p13500 Brassica napus HOM05D007700 ORTHO05D009669 1.1e-36 158.7 238 40.3
A09p11480 Brassica napus HOM05D007700 ORTHO05D009669 2.5e-36 157.5 238 42.4
CsaV3_6G047710 Cucumis sativus L. HOM05D007700 ORTHO05D009669 3.2e-36 157.1 235 40.9
Nitab4.5_0003207g0040 Nicotiana tabacum HOM05D007700 ORTHO05D009669 9.4e-36 155.6 118 66.9
BcaB07g31715 Brassica carinata HOM05D007700 ORTHO05D009669 2.1e-35 154.5 240 44.2
Glyma.07G109000 Glycine max HOM05D007700 ORTHO05D009669 2.1e-35 154.5 240 40.0
BraA09t36788Z Brassica rapa HOM05D007700 ORTHO05D009669 2.7e-35 154.1 239 41.8
MELO3C007960.2 Cucumis melo HOM05D007700 ORTHO05D009669 2.7e-35 154.1 235 41.3
Dinv08534 Davidia involucrata HOM05D007700 ORTHO05D009669 2.7e-35 154.1 118 62.7
Sp3g31020 Schrenkiella parvula HOM05D007700 ORTHO05D009669 6.1e-35 152.9 240 40.4
HanXRQChr07g0192051 Helianthus annuus HOM05D007700 ORTHO05D009669 1.8e-34 151.4 239 41.0
CAN.G890.59 Capsicum annuum HOM05D007700 ORTHO05D009669 2.3e-34 151.0 118 66.1
Nitab4.5_0001581g0090 Nicotiana tabacum HOM05D007700 ORTHO05D009669 2.3e-34 151.0 118 65.3
DCAR_023138 Daucus carota HOM05D007700 ORTHO05D009669 6.8e-34 149.4 175 49.1
Lsat_1_v5_gn_2_74520 Lactuca sativa HOM05D007700 ORTHO05D009669 2.6e-33 147.5 232 37.9
Ciclev10025555m.g Citrus clementina HOM05D007700 ORTHO05D009669 9.8e-33 145.6 238 38.7
Sed0015131 Sechium edule HOM05D000242 ORTHO05D009669 1.7e-32 144.8 184 44.0
COL.COLO4_22522 Corchorus olitorius HOM05D007700 ORTHO05D009669 3.8e-29 133.7 193 42.0
Gohir.A02G176100 Gossypium hirsutum HOM05D007700 ORTHO05D009669 1.1e-28 132.1 118 58.5
Prupe.7G178400 Prunus persica HOM05D007700 ORTHO05D009669 1.9e-28 131.3 205 46.3
CDE05G1147 Ceratophyllum demersum HOM05D007700 ORTHO05D009669 1.6e-27 128.3 231 35.5
Lalb_Chr03g0039951 Lupinus albus HOM05D007700 ORTHO05D009669 3.6e-27 127.1 205 38.5
FAN23G0395 Fragaria x ananassa HOM05D007700 ORTHO05D009669 1.8e-26 124.8 163 41.7
HPP92_025432 Vanilla planifolia HOM05D007700 ORTHO05D009669 1.8e-26 124.8 242 36.8
TWI73G0108 Tripterygium wilfordii HOM05D007700 ORTHO05D009669 3.0e-26 124.0 142 45.8
EL10Ac6g13369 Beta vulgaris HOM05D007700 ORTHO05D009669 4.0e-26 123.6 213 40.4
FvH4_1g10671 Fragaria vesca HOM05D007700 ORTHO05D009669 5.2e-26 123.2 163 41.1
Phvul.010G056500 Phaseolus vulgaris HOM05D007700 ORTHO05D009669 1.2e-25 122.1 246 34.6
AUR62026170 Chenopodium quinoa HOM05D007700 ORTHO05D009669 4.4e-25 120.2 208 38.0
Ah.03g134060 Amaranthus hybridus HOM05D007700 ORTHO05D009669 5.7e-25 119.8 209 39.7
Aqoxy6G01792 Aquilegia oxysepala HOM05D007700 ORTHO05D009669 6.3e-24 116.3 216 35.2
AUR62041102 Chenopodium quinoa HOM05D007700 ORTHO05D009669 1.1e-23 115.5 211 37.0
MD02G1120600 Malus domestica HOM05D007700 ORTHO05D009669 6.6e-21 106.3 206 37.4
Sc03g0003890 Simmondsia chinensis HOM05D007700 ORTHO05D009669 1.6e-19 101.7 199 36.7
SHI08474 Sapria himalayana HOM05D007700 ORTHO05D009669 6.1e-19 99.8 106 46.2
Actinidia17391 Actinidia chinensis HOM05D000192 ORTHO05D000123 1.5e-17 95.1 102 46.1
ATR0661G421 Amborella trichopoda HOM05D007700 ORTHO05D009669 2.0e-14 84.7 93 46.2
ATR0739G057 Amborella trichopoda HOM05D007700 ORTHO05D009669 2.7e-14 84.3 244 28.3
Glyma.03G117900 Glycine max HOM05D007700 ORTHO05D009669 1.2e-11 75.5 220 30.0
CSS0049050 Camellia sinensis var. sinensis HOM05D007700 ORTHO05D009669 4.7e-11 73.6 46 73.9
Sp3g31030 Schrenkiella parvula HOM05D007700 ORTHO05D009669 2.0e-09 68.2 45 68.9
BcaC04g22956 Brassica carinata HOM05D007700 ORTHO05D009669 5.8e-09 66.6 43 69.8
ECA238G1378 Erigeron canadensis HOM05D007700 ORTHO05D009669 9.8e-09 65.9 43 67.4
CDE05G1645 Ceratophyllum demersum HOM05D007700 ORTHO05D009669 2.7e-06 57.8 40 65.0


User provided reference genes

Program Settings