Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2751G54198 Striga asiatica HOM05D005772 ORTHO05D006468 2.6e-65 251.9 129 100.0
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 2.6e-65 251.9 129 100.0
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 2.6e-65 251.9 129 100.0
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 5.5e-39 164.5 132 72.7
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 2.2e-27 125.9 133 55.6
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 1.6e-25 119.8 127 59.1
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 5.9e-25 117.9 134 56.0
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 1.3e-24 116.7 127 55.9
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 4.3e-23 111.7 134 55.2
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 2.9e-19 99.0 128 50.8
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 1.8e-18 96.3 128 50.0
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 3.5e-17 92.0 128 43.0
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 7.8e-17 90.9 130 49.2
Solyc11g018470.3 Solanum lycopersicum HOM05D005772 ORTHO05D006468 1.0e-16 90.5 131 48.1
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 1.3e-16 90.1 128 46.1
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 1.3e-16 90.1 130 43.8
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 1.3e-16 90.1 132 43.2
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 1.7e-16 89.7 135 43.7
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 2.3e-16 89.4 137 45.3
Rhsim06G0101700 Rhododendron simsii HOM05D005772 ORTHO05D006468 6.6e-16 87.8 122 47.5
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 8.6e-16 87.4 128 46.9
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 1.1e-15 87.0 137 45.3
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 5.6e-15 84.7 132 42.4
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 7.3e-15 84.3 129 44.2
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 2.8e-14 82.4 128 43.8
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 1.4e-13 80.1 129 41.9
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 5.2e-13 78.2 134 41.0
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 6.8e-13 77.8 133 42.9
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 6.8e-13 77.8 133 45.9
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 8.9e-13 77.4 129 45.7
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 1.2e-12 77.0 133 39.1
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 3.4e-12 75.5 132 39.4
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 4.4e-12 75.1 127 41.7
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 1.7e-11 73.2 129 38.8
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 1.7e-11 73.2 128 41.4
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 2.9e-11 72.4 130 39.2
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 4.9e-11 71.6 126 44.4
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 8.3e-11 70.9 127 38.6
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 1.1e-10 70.5 127 40.9
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 1.4e-10 70.1 124 40.3
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 3.2e-10 68.9 129 44.2
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 3.2e-10 68.9 125 44.0
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 1.2e-09 67.0 128 34.4
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 1.6e-09 66.6 131 40.5
Sabra05G0136400 Salix brachista HOM05D005772 ORTHO05D006468 3.5e-09 65.5 129 41.1
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 1.3e-08 63.5 128 35.2
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 1.7e-08 63.2 126 42.1
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.7e-08 63.2 130 37.7
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 2.3e-08 62.8 133 36.1
Sed0012770 Sechium edule HOM05D005772 ORTHO05D006468 3.9e-08 62.0 127 34.6
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 5.0e-08 61.6 162 30.9
Haze_17513 Corylus avellana HOM05D000187 ORTHO05D000926 1.9e-07 59.7 98 35.7
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 3.3e-07 58.9 128 36.7
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 7.3e-07 57.8 125 36.0
Lsat_1_v5_gn_8_150021 Lactuca sativa HOM05D041600 ORTHO05D006468 9.5e-07 57.4 120 37.5
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 1.2e-06 57.0 129 38.8
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 1.6e-06 56.6 128 37.5
Oeu038376.1 Olea europaea HOM05D005772 ORTHO05D006468 4.7e-06 55.1 120 40.0
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 4.7e-06 55.1 130 35.4
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 8.1e-06 54.3 131 33.6
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 8.1e-06 54.3 116 36.2


User provided reference genes

Program Settings