Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold274G46490 Striga asiatica HOM05D007176 ORTHO05D009050 1.3e-96 356.3 174 100.0
Sopen06g001340 Solanum pennellii HOM05D007176 ORTHO05D009050 5.0e-67 258.1 161 76.4
Thecc.05G178200 Theobroma cacao HOM05D007176 ORTHO05D009050 4.6e-65 251.5 161 75.2
Gohir.A04G053500 Gossypium hirsutum HOM05D007176 ORTHO05D009050 1.0e-64 250.4 161 73.3
Duzib106G0399 Durio zibethinus HOM05D007176 ORTHO05D009050 1.3e-64 250.0 161 72.7
COL.COLO4_29390 Corchorus olitorius HOM05D007176 ORTHO05D009050 1.5e-63 246.5 161 72.0
Dinv16365 Davidia involucrata HOM05D007176 ORTHO05D009050 2.2e-62 242.7 161 70.8
RcHm_v2.0_Chr3g0478871 Rosa chinensis HOM05D007176 ORTHO05D009050 1.4e-61 240.0 156 71.2
Migut.K00028 Erythranthe guttata HOM05D007176 ORTHO05D009050 2.4e-61 239.2 139 84.2
GSVIVG01033441001 Vitis vinifera HOM05D007176 ORTHO05D009050 4.5e-60 235.0 159 70.4
Ciclev10012430m.g Citrus clementina HOM05D007176 ORTHO05D009050 1.0e-59 233.8 163 67.5
CARHR168930 Cardamine hirsuta HOM05D007176 ORTHO05D009050 1.3e-59 233.4 163 65.6
BcaC07g40246 Brassica carinata HOM05D007176 ORTHO05D009050 8.5e-59 230.7 163 66.3
C08p33910 Brassica napus HOM05D007176 ORTHO05D009050 8.5e-59 230.7 163 66.3
THA.LOC104802720 Tarenaya hassleriana HOM05D007176 ORTHO05D009050 1.4e-58 229.9 164 66.5
SalBow1G6257 Salvia bowleyana HOM05D007176 ORTHO05D009050 2.5e-58 229.2 147 74.8
Peaxi162Scf00258g00925 Petunia axillaris HOM05D007176 ORTHO05D009050 1.0e-56 223.8 135 77.8
Sp5g04340 Schrenkiella parvula HOM05D007176 ORTHO05D009050 1.0e-56 223.8 163 66.3
Aa31LG10G13110 Aethionema arabicum HOM05D007176 ORTHO05D009050 3.0e-56 222.2 163 65.6
A09p51090 Brassica napus HOM05D007176 ORTHO05D009050 8.8e-56 220.7 187 58.3
PGSC0003DMG400029168 Solanum tuberosum HOM05D007176 ORTHO05D009050 8.8e-56 220.7 136 79.4
Solyc06g005380.3 Solanum lycopersicum HOM05D007176 ORTHO05D009050 2.0e-55 219.5 136 78.7
QL07p025011 Quercus lobata HOM05D007176 ORTHO05D009050 7.4e-55 217.6 137 75.2
Rhsim04G0094400 Rhododendron simsii HOM05D007176 ORTHO05D009050 2.8e-54 215.7 136 75.7
CAN.G111.5 Capsicum annuum HOM05D007176 ORTHO05D009050 3.7e-54 215.3 135 78.5
Manes.09G039600 Manihot esculenta HOM05D007176 ORTHO05D009050 8.2e-54 214.2 137 74.5
vmacro22113 Vaccinium macrocarpon HOM05D007176 ORTHO05D009050 6.9e-53 211.1 192 58.3
FAN09G2372 Fragaria x ananassa HOM05D007176 ORTHO05D009050 1.3e-51 206.8 137 70.1
PSO675G7508 Papaver somniferum HOM05D007176 ORTHO05D009050 1.3e-51 206.8 165 58.2
FvH4_6g21620 Fragaria vesca HOM05D007176 ORTHO05D009050 1.7e-51 206.5 137 70.8
FAN02G0922 Fragaria x ananassa HOM05D007176 ORTHO05D009050 1.7e-51 206.5 137 70.8
FAN14G2546 Fragaria x ananassa HOM05D007176 ORTHO05D009050 8.5e-51 204.1 136 70.6
MD14G1051600 Malus domestica HOM05D007176 ORTHO05D009050 8.5e-51 204.1 162 59.9
CiPaw.09G027300 Carya illinoinensis HOM05D007176 ORTHO05D009050 1.1e-50 203.8 136 72.1
FAN05G5781 Fragaria x ananassa HOM05D007176 ORTHO05D009050 1.1e-50 203.8 136 70.6
DCAR_019856 Daucus carota HOM05D007176 ORTHO05D009050 1.4e-50 203.4 167 61.1
AUR62032747 Chenopodium quinoa HOM05D007176 ORTHO05D009050 2.5e-50 202.6 135 70.4
Cc06_g15630 Coffea canephora HOM05D007176 ORTHO05D009050 2.5e-50 202.6 138 71.7
VMungo0720G0788 Vigna mungo HOM05D007176 ORTHO05D009050 2.5e-50 202.6 163 60.1
CSS0035640 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 3.2e-50 202.2 136 74.3
CSS0044198 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 3.2e-50 202.2 136 74.3
Thhalv10006065m.g Eutrema salsugineum HOM05D007176 ORTHO05D009050 3.2e-50 202.2 139 69.1
Lsat_1_v5_gn_9_26900 Lactuca sativa HOM05D007176 ORTHO05D009050 3.2e-50 202.2 165 60.0
TAR633G0683 Trochodendron aralioides HOM05D007176 ORTHO05D009050 9.4e-50 200.7 136 68.4
TAR633G1141 Trochodendron aralioides HOM05D007176 ORTHO05D009050 9.4e-50 200.7 136 68.4
Cfa020128 Carpinus fangiana HOM05D007176 ORTHO05D009050 1.2e-49 200.3 135 71.9
Nitab4.5_0008255g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 1.2e-49 200.3 160 64.4
PSO541G4948 Papaver somniferum HOM05D007176 ORTHO05D009050 1.6e-49 199.9 147 62.6
Sc13g0002490 Simmondsia chinensis HOM05D007176 ORTHO05D009050 1.6e-49 199.9 137 67.9
Haze_20048 Corylus avellana HOM05D007176 ORTHO05D009050 2.7e-49 199.1 179 58.1
Haze_20055 Corylus avellana HOM05D007176 ORTHO05D009050 2.7e-49 199.1 179 58.1
Hma1.2p1_0645F.1_g194890 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 1.0e-48 197.2 137 70.1
Hma1.2p1_0645F.1_g194900 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 1.0e-48 197.2 137 70.1
Eucgr.K01865 Eucalyptus grandis HOM05D007176 ORTHO05D009050 1.4e-48 196.8 138 67.4
Lju124C23T17 Lonicera japonica HOM05D007176 ORTHO05D009050 3.0e-48 195.7 127 74.8
AT3G58530 Arabidopsis thaliana HOM05D007176 ORTHO05D009050 6.7e-48 194.5 141 66.0
Ah.13g075580 Amaranthus hybridus HOM05D007176 ORTHO05D009050 1.1e-47 193.7 135 69.6
AL5G40300 Arabidopsis lyrata HOM05D007176 ORTHO05D009050 2.0e-47 193.0 140 66.4
Carub.0005s2528 Capsella rubella HOM05D007176 ORTHO05D009050 2.0e-47 193.0 139 66.2
EL10Ac3g06857 Beta vulgaris HOM05D007176 ORTHO05D009050 7.4e-47 191.0 133 68.4
Nn2g15783 Nelumbo nucifera HOM05D007176 ORTHO05D009050 3.7e-46 188.7 136 66.2
ECA247G1245 Erigeron canadensis HOM05D007176 ORTHO05D009050 4.1e-45 185.3 139 64.7
HanXRQChr10g0300591 Helianthus annuus HOM05D007176 ORTHO05D009050 5.3e-45 184.9 142 64.1
Prupe.7G084400 Prunus persica HOM05D007176 ORTHO05D009050 5.9e-44 181.4 135 63.7
arahy.Tifrunner.gnm1.ann1.5B5G66 Arachis hypogaea HOM05D007176 ORTHO05D009050 3.8e-43 178.7 141 63.1
arahy.Tifrunner.gnm1.ann1.I5CDLA Arachis hypogaea HOM05D007176 ORTHO05D009050 1.1e-42 177.2 141 62.4
Potri.006G195800 Populus trichocarpa HOM05D007176 ORTHO05D009050 1.1e-42 177.2 137 63.5
TPR.G19346 Trifolium pratense HOM05D007176 ORTHO05D009050 3.2e-42 175.6 140 62.1
Os02g0281150 Oryza sativa ssp. japonica HOM05D007176 ORTHO05D009050 5.5e-42 174.9 145 57.2
HPP92_010126 Vanilla planifolia HOM05D007176 ORTHO05D009050 1.2e-41 173.7 139 61.2
MD12G1053200 Malus domestica HOM05D007176 ORTHO05D009050 2.1e-41 172.9 141 59.6
CANSAT64G0938 Cannabis sativa HOM05D007176 ORTHO05D009050 2.7e-41 172.6 140 60.0
Sabra06G0150500 Salix brachista HOM05D007176 ORTHO05D009050 2.7e-41 172.6 137 61.3
Aqoxy279s002 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 4.7e-41 171.8 138 63.8
Aqoxy2G00051 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 4.7e-41 171.8 138 63.8
Lalb_Chr02g0153821 Lupinus albus HOM05D007176 ORTHO05D009050 4.7e-41 171.8 139 60.4
Glyma.09G105500 Glycine max HOM05D007176 ORTHO05D009050 1.0e-40 170.6 141 59.6
Medtr1g054625 Medicago truncatula HOM05D007176 ORTHO05D009050 1.0e-40 170.6 141 59.6
Lj5g0009846 Lotus japonicus HOM05D007176 ORTHO05D009050 2.3e-40 169.5 140 61.4
Ca_03573_v3 Cicer arietinum L. HOM05D007176 ORTHO05D009050 8.8e-40 167.5 145 57.9
Actinidia17284 Actinidia chinensis HOM05D007176 ORTHO05D009050 2.6e-39 166.0 137 60.6
Cpa.g.sc85.35 Carica papaya HOM05D007176 ORTHO05D009050 5.7e-39 164.9 137 59.1
Zm00001eb237210 Zea mays HOM05D007176 ORTHO05D009050 4.8e-38 161.8 137 57.7
Phvul.007G261900 Phaseolus vulgaris HOM05D007176 ORTHO05D009050 2.4e-37 159.5 141 57.4
Atru.chr8.1185 Acer truncatum HOM05D007176 ORTHO05D009050 1.6e-36 156.8 144 55.6
MBI01_g44281_MAGBIO Magnolia biondii HOM05D007176 ORTHO05D009050 1.7e-35 153.3 148 55.4
CDE04G3485 Ceratophyllum demersum HOM05D007176 ORTHO05D009050 2.9e-35 152.5 136 55.9
Nitab4.5_0000009g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 8.5e-35 151.0 150 56.7
PGR142G3952 Punica granatum HOM05D007176 ORTHO05D009050 1.5e-34 150.2 138 54.3
unitig_736.g22301 Utricularia gibba HOM05D007176 ORTHO05D009050 2.1e-33 146.4 194 46.4
ATR0001G043 Amborella trichopoda HOM05D007176 ORTHO05D009050 1.8e-32 143.3 111 62.2
Atru.BG.213.p Acer truncatum HOM05D007176 ORTHO05D009050 3.0e-32 142.5 141 54.6
Gohir.D04G094700 Gossypium hirsutum HOM05D007176 ORTHO05D009050 4.4e-31 138.7 97 67.0
BraA09t40553Z Brassica rapa HOM05D000032 ORTHO05D001620 1.3e-30 137.1 97 63.9
BolC8t50987H Brassica oleracea HOM05D000032 ORTHO05D001620 2.2e-30 136.3 97 63.9
Gorai.009G392400 Gossypium raimondii HOM05D007176 ORTHO05D009050 8.3e-30 134.4 120 55.0
Psat6g088000 Pisum sativum HOM05D007176 ORTHO05D009050 1.2e-28 130.6 93 66.7
Pp3c23_2930 Physcomitrium patens HOM05D007176 ORTHO05D009050 3.8e-27 125.6 137 46.0
BcaC02g10014 Brassica carinata HOM05D007176 ORTHO05D009050 3.6e-25 119.0 92 60.9
SMO118G0524 Selaginella moellendorffii HOM05D007176 ORTHO05D009050 8.0e-25 117.9 134 44.8
AagrBONN_evm.TU.Sc2ySwM_228.1251 Anthoceros agrestis HOM05D007176 ORTHO05D009050 3.5e-20 102.4 136 37.5
BolC4t24963H Brassica oleracea HOM05D000032 ORTHO05D001620 3.3e-18 95.9 73 61.6
SEGI_09769 Sequoiadendron giganteum HOM05D007176 ORTHO05D009050 3.3e-18 95.9 81 58.0
C04p33960 Brassica napus HOM05D007176 ORTHO05D009050 1.2e-17 94.0 73 61.6
arahy.Tifrunner.gnm1.ann1.0S64XP Arachis hypogaea HOM05D007176 ORTHO05D009050 3.6e-17 92.4 72 62.5
A04p02540 Brassica napus HOM05D000032 ORTHO05D001620 3.6e-09 65.9 97 38.1
PRCOL_00005880 Prasinoderma coloniale HOM05D007176 ORTHO05D009050 4.0e-08 62.4 90 37.8


User provided reference genes

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