Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold273G46455 Striga asiatica HOM05D006968 ORTHO05D008748 6.2e-123 444.1 222 100.0
SGA_v2.0_scaffold18G08383 Striga asiatica HOM05D006968 ORTHO05D008748 1.8e-93 346.3 222 82.4
SGA_v2.0_scaffold1G00109 Striga asiatica HOM05D006968 ORTHO05D008748 3.3e-55 219.2 128 89.8
Rhsim02G0123400 Rhododendron simsii HOM05D006968 ORTHO05D008748 1.5e-36 157.1 126 65.9
Actinidia07663 Actinidia chinensis HOM05D006968 ORTHO05D008748 3.4e-36 156.0 124 64.5
MSTRG.16189 Avicennia marina HOM05D006968 ORTHO05D008748 6.4e-35 151.8 126 64.3
Oeu042433.1 Olea europaea HOM05D006968 ORTHO05D008748 4.1e-34 149.1 127 59.8
SalBow8G0548 Salvia bowleyana HOM05D006968 ORTHO05D008748 4.6e-33 145.6 127 59.1
SalBow8G1131 Salvia bowleyana HOM05D006968 ORTHO05D008748 4.6e-33 145.6 127 59.1
Lsat_1_v5_gn_0_21300 Lactuca sativa HOM05D006968 ORTHO05D008748 1.1e-31 141.0 126 54.0
CSS0042403 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 1.5e-31 140.6 118 61.0
CSS0021911 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 2.5e-31 139.8 118 60.2
Hund21573 Selenicereus undatus HOM05D006968 ORTHO05D008748 1.2e-30 137.5 118 52.5
TAR627G0978 Trochodendron aralioides HOM05D006968 ORTHO05D008748 2.1e-30 136.7 126 56.3
PSO541G0278 Papaver somniferum HOM05D006968 ORTHO05D008748 2.8e-30 136.3 123 54.5
Eucgr.E02869 Eucalyptus grandis HOM05D006968 ORTHO05D008748 6.2e-30 135.2 121 56.2
PSO675G0867 Papaver somniferum HOM05D006968 ORTHO05D008748 5.2e-29 132.1 123 52.8
PGR042G2565 Punica granatum HOM05D006968 ORTHO05D008748 6.8e-29 131.7 126 53.2
Dinv32313 Davidia involucrata HOM05D006968 ORTHO05D008748 8.9e-29 131.3 129 55.0
CiPaw.09G132600 Carya illinoinensis HOM05D006968 ORTHO05D008748 1.2e-28 131.0 124 53.2
AUR62035842 Chenopodium quinoa HOM05D006968 ORTHO05D008748 1.5e-28 130.6 118 53.4
CANSAT35G0299 Cannabis sativa HOM05D006968 ORTHO05D008748 2.0e-28 130.2 124 55.6
DCAR_007922 Daucus carota HOM05D000065 ORTHO05D000162 2.0e-28 130.2 117 53.8
Nitab4.5_0003913g0060 Nicotiana tabacum HOM05D006968 ORTHO05D008748 2.0e-28 130.2 146 49.3
QL05p052638 Quercus lobata HOM05D006968 ORTHO05D008748 5.8e-28 128.6 113 54.9
CAN.G257.117 Capsicum annuum HOM05D006968 ORTHO05D008748 7.6e-28 128.3 160 45.0
Manes.17G062400 Manihot esculenta HOM05D006968 ORTHO05D008748 7.6e-28 128.3 127 52.8
HanXRQChr02g0055391 Helianthus annuus HOM05D006968 ORTHO05D008748 9.9e-28 127.9 131 51.9
Atru.chr10.1476 Acer truncatum HOM05D006968 ORTHO05D008748 1.7e-27 127.1 121 52.9
HanXRQChr02g0055401 Helianthus annuus HOM05D006968 ORTHO05D008748 1.7e-27 127.1 127 52.8
Potri.011G076600 Populus trichocarpa HOM05D006968 ORTHO05D008748 1.7e-27 127.1 123 52.8
Solyc02g071600.4 Solanum lycopersicum HOM05D006968 ORTHO05D008748 2.9e-27 126.3 160 44.4
Nitab4.5_0010884g0010 Nicotiana tabacum HOM05D006968 ORTHO05D008748 3.8e-27 125.9 144 47.9
Sabra11G0063700 Salix brachista HOM05D006968 ORTHO05D008748 4.9e-27 125.6 123 52.8
PGSC0003DMG400007245 Solanum tuberosum HOM05D006968 ORTHO05D008748 8.4e-27 124.8 121 52.9
EL10Ac8g19830 Beta vulgaris HOM05D006968 ORTHO05D008748 1.4e-26 124.0 126 52.4
Cfa001060 Carpinus fangiana HOM05D006968 ORTHO05D008748 1.9e-26 123.6 120 49.2
Nn3g20980 Nelumbo nucifera HOM05D006968 ORTHO05D008748 1.9e-26 123.6 126 52.4
Cpa.g.sc51.7 Carica papaya HOM05D006968 ORTHO05D008748 2.4e-26 123.2 118 51.7
Sopen02g020620 Solanum pennellii HOM05D006968 ORTHO05D008748 3.2e-26 122.9 161 44.7
Haze_05452 Corylus avellana HOM05D006968 ORTHO05D008748 4.1e-26 122.5 122 50.0
Actinidia39540 Actinidia chinensis HOM05D006968 ORTHO05D008748 9.2e-26 121.3 126 54.8
Sed0009046 Sechium edule HOM05D006968 ORTHO05D008748 9.2e-26 121.3 124 50.0
Ah.02g125570 Amaranthus hybridus HOM05D006968 ORTHO05D008748 1.6e-25 120.6 117 48.7
ClCG03G007290 Citrullus lanatus HOM05D006968 ORTHO05D008748 1.6e-25 120.6 121 49.6
Ciclev10016662m.g Citrus clementina HOM05D006968 ORTHO05D008748 1.6e-25 120.6 116 53.4
Cc02_g16200 Coffea canephora HOM05D006968 ORTHO05D008748 1.6e-25 120.6 129 49.6
ECA248G0802 Erigeron canadensis HOM05D006968 ORTHO05D008748 1.6e-25 120.6 109 53.2
SGA_v2.0_scaffold305G47958 Striga asiatica HOM05D000046 ORTHO05D405780 2.1e-25 120.2 59 100.0
TWI73G0998 Tripterygium wilfordii HOM05D006968 ORTHO05D008748 2.1e-25 120.2 118 47.5
Gohir.A05G152300 Gossypium hirsutum HOM05D006968 ORTHO05D008748 6.0e-25 118.6 119 51.3
Gohir.D05G154800 Gossypium hirsutum HOM05D006968 ORTHO05D008748 6.0e-25 118.6 119 51.3
Lsat_1_v5_gn_1_112261 Lactuca sativa HOM05D006968 ORTHO05D008748 6.0e-25 118.6 91 61.5
unitig_748.g7643 Utricularia gibba HOM05D001519 ORTHO05D008748 6.0e-25 118.6 117 51.3
FvH4_3g06600 Fragaria vesca HOM05D006968 ORTHO05D008748 7.8e-25 118.2 121 48.8
FAN16G1632 Fragaria x ananassa HOM05D006968 ORTHO05D008748 7.8e-25 118.2 121 48.8
Prupe.4G071300 Prunus persica HOM05D006968 ORTHO05D008748 7.8e-25 118.2 126 50.8
MELO3C002693.2 Cucumis melo HOM05D006968 ORTHO05D008748 1.0e-24 117.9 126 47.6
Sc05g0006720 Simmondsia chinensis HOM05D000065 ORTHO05D000162 1.0e-24 117.9 103 59.2
RcHm_v2.0_Chr5g0012541 Rosa chinensis HOM05D006968 ORTHO05D008748 1.3e-24 117.5 121 49.6
Lj2A313T77 Lonicera japonica HOM05D006968 ORTHO05D008748 1.7e-24 117.1 121 49.6
FAN25G0438 Fragaria x ananassa HOM05D006968 ORTHO05D008748 2.3e-24 116.7 120 48.3
Gorai.009G159100 Gossypium raimondii HOM05D006968 ORTHO05D008748 2.3e-24 116.7 119 50.4
Duzib192G0634 Durio zibethinus HOM05D006968 ORTHO05D008748 5.1e-24 115.5 103 57.3
Phvul.006G168900 Phaseolus vulgaris HOM05D006968 ORTHO05D008748 5.1e-24 115.5 133 47.4
VMungo0540G1786 Vigna mungo HOM05D006968 ORTHO05D008748 5.1e-24 115.5 127 48.8
CsaV3_1G032900 Cucumis sativus L. HOM05D006968 ORTHO05D008748 8.6e-24 114.8 126 46.8
FAN11G1072 Fragaria x ananassa HOM05D006968 ORTHO05D008748 3.3e-23 112.8 124 47.6
THA.LOC104798448 Tarenaya hassleriana HOM05D006968 ORTHO05D008748 3.3e-23 112.8 123 47.2
SGA_v2.0_scaffold36G14429 Striga asiatica HOM05D003154 ORTHO05D003565 9.6e-23 111.3 57 96.5
Glyma.13G222900 Glycine max HOM05D006968 ORTHO05D008748 1.2e-22 110.9 127 47.2
CiPaw.09G132700 Carya illinoinensis HOM05D006968 ORTHO05D008748 1.6e-22 110.5 142 43.0
COL.COLO4_22824 Corchorus olitorius HOM05D006968 ORTHO05D008748 2.8e-22 109.8 120 48.3
arahy.Tifrunner.gnm1.ann1.5H3RNB Arachis hypogaea HOM05D006968 ORTHO05D008748 3.6e-22 109.4 131 45.8
arahy.Tifrunner.gnm1.ann1.9V28L0 Arachis hypogaea HOM05D006968 ORTHO05D008748 1.1e-21 107.8 131 45.0
GSVIVG01021311001 Vitis vinifera HOM05D006968 ORTHO05D008748 1.8e-21 107.1 83 61.4
Lj6g0008479 Lotus japonicus HOM05D006968 ORTHO05D008748 3.1e-21 106.3 119 45.4
MD10G1270500 Malus domestica HOM05D006968 ORTHO05D008748 3.1e-21 106.3 118 45.8
QL05p052648 Quercus lobata HOM05D006968 ORTHO05D008748 3.1e-21 106.3 103 52.4
Thecc.06G160300 Theobroma cacao HOM05D006968 ORTHO05D008748 5.2e-21 105.5 109 47.7
Aqoxy1G01892 Aquilegia oxysepala HOM05D006968 ORTHO05D008748 2.6e-20 103.2 119 47.9
Aa31LG9G7390 Aethionema arabicum HOM05D006968 ORTHO05D008748 1.3e-19 100.9 125 41.6
Medtr2g018105 Medicago truncatula HOM05D006968 ORTHO05D008748 2.9e-19 99.8 99 50.5
Psat1g192720 Pisum sativum HOM05D006968 ORTHO05D008748 2.9e-19 99.8 110 47.3
BolC7t43414H Brassica oleracea HOM05D006968 ORTHO05D008748 4.9e-19 99.0 101 49.5
AUR62027636 Chenopodium quinoa HOM05D006968 ORTHO05D008748 4.9e-19 99.0 118 42.4
Thhalv10001012m.g Eutrema salsugineum HOM05D006968 ORTHO05D008748 4.9e-19 99.0 101 48.5
Sp2g10550 Schrenkiella parvula HOM05D006968 ORTHO05D008748 8.4e-19 98.2 101 47.5
A06p46470 Brassica napus HOM05D006968 ORTHO05D008748 1.1e-18 97.8 101 47.5
BcaC06g31531 Brassica carinata HOM05D006968 ORTHO05D008748 1.4e-18 97.4 101 48.5
BcaC06g34413 Brassica carinata HOM05D006968 ORTHO05D008748 1.4e-18 97.4 101 48.5
C07p28780 Brassica napus HOM05D006968 ORTHO05D008748 1.4e-18 97.4 101 48.5
Carub.0008s0235 Capsella rubella HOM05D006968 ORTHO05D008748 1.4e-18 97.4 101 47.5
AL8G12990 Arabidopsis lyrata HOM05D006968 ORTHO05D008748 2.4e-18 96.7 101 46.5
AT5G45660 Arabidopsis thaliana HOM05D006968 ORTHO05D008748 5.4e-18 95.5 101 45.5
BraA06t27520Z Brassica rapa HOM05D006968 ORTHO05D008748 7.1e-18 95.1 101 46.5
CARHR176320 Cardamine hirsuta HOM05D006968 ORTHO05D008748 7.1e-18 95.1 106 44.3
Migut.M00982 Erythranthe guttata HOM05D006968 ORTHO05D008748 7.1e-18 95.1 68 69.1
MD00G1093500 Malus domestica HOM05D006968 ORTHO05D008748 7.1e-18 95.1 117 44.4
TPR.G4467 Trifolium pratense HOM05D006968 ORTHO05D008748 7.1e-18 95.1 119 42.0
Ca_00496_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 1.6e-17 94.0 110 45.5
Ca_30235_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 1.6e-17 94.0 110 45.5
FAN12G2652 Fragaria x ananassa HOM05D006968 ORTHO05D008748 1.7e-16 90.5 121 42.1
FvH4_4g34020 Fragaria vesca HOM05D006968 ORTHO05D008748 2.3e-16 90.1 121 42.1
HPP92_009092 Vanilla planifolia HOM05D006968 ORTHO05D008748 3.9e-16 89.4 103 42.7
CDE10G0144 Ceratophyllum demersum HOM05D000065 ORTHO05D008748 5.1e-16 89.0 108 42.6
Lalb_Chr18g0055011 Lupinus albus HOM05D006968 ORTHO05D008748 6.6e-16 88.6 95 50.5
SEGI_37019 Sequoiadendron giganteum HOM05D006968 ORTHO05D008748 5.6e-15 85.5 122 34.4
ECA248G3047 Erigeron canadensis HOM05D006968 ORTHO05D008748 1.8e-13 80.5 131 38.2
Pp3c13_11400 Physcomitrium patens HOM05D006968 ORTHO05D008748 9.0e-13 78.2 116 34.5
Os01g0727900 Oryza sativa ssp. japonica HOM05D006968 ORTHO05D008748 1.7e-11 73.9 125 33.6
FAN22G0056 Fragaria x ananassa HOM05D006968 ORTHO05D008748 3.2e-10 69.7 135 36.3
Zm00001eb045900 Zea mays HOM05D006968 ORTHO05D008748 1.2e-09 67.8 127 30.7
Zm00001eb154290 Zea mays HOM05D006968 ORTHO05D008748 6.0e-09 65.5 127 30.7
TWI53G1777 Tripterygium wilfordii HOM05D006968 ORTHO05D008748 1.0e-08 64.7 85 43.5
Lalb_Chr18g0055041 Lupinus albus HOM05D006968 ORTHO05D008748 1.3e-08 64.3 74 43.2
GSVIVG01021310001 Vitis vinifera HOM05D006968 ORTHO05D008748 5.1e-08 62.4 62 56.5
Haze_05450 Corylus avellana HOM05D006968 ORTHO05D164033 2.5e-07 60.1 50 54.0


User provided reference genes

Program Settings