Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold273G46437 Striga asiatica HOM05D007490 ORTHO05D008750 7.9e-110 400.6 222 100.0
SGA_v2.0_scaffold94G28485 Striga asiatica HOM05D007490 ORTHO05D008750 6.5e-72 274.6 230 70.4
Migut.K00089 Erythranthe guttata HOM05D007490 ORTHO05D008750 2.8e-46 189.5 230 53.9
SalBow3G0554 Salvia bowleyana HOM05D007490 ORTHO05D008750 1.6e-41 173.7 248 48.4
unitig_0.g2659 Utricularia gibba HOM05D007490 ORTHO05D008750 8.6e-32 141.4 222 47.7
Duzib128G0116 Durio zibethinus HOM05D007490 ORTHO05D008750 3.5e-25 119.4 232 41.8
COL.COLO4_28277 Corchorus olitorius HOM05D007490 ORTHO05D008750 1.0e-24 117.9 236 41.5
Oeu033005.1 Olea europaea HOM05D007490 ORTHO05D008750 1.3e-24 117.5 203 45.8
Thecc.05G153900 Theobroma cacao HOM05D007490 ORTHO05D008750 1.7e-24 117.1 232 40.9
Ciclev10005740m.g Citrus clementina HOM05D007490 ORTHO05D008750 6.2e-22 108.6 241 39.0
Dinv39599 Davidia involucrata HOM05D007490 ORTHO05D008750 8.1e-22 108.2 225 41.8
Manes.09G021650 Manihot esculenta HOM05D007490 ORTHO05D008750 2.4e-21 106.7 242 37.2
Atru.chr1.1094 Acer truncatum HOM05D007490 ORTHO05D008750 7.6e-20 101.7 248 39.1
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 7.6e-20 101.7 222 38.3
DCAR_013600 Daucus carota HOM05D007490 ORTHO05D008750 1.7e-19 100.5 219 38.4
Sc13g0001780 Simmondsia chinensis HOM05D007490 ORTHO05D008750 2.9e-19 99.8 114 51.8
Sopen04g007810 Solanum pennellii HOM05D007490 ORTHO05D008750 4.9e-19 99.0 144 44.4
QL07p000297 Quercus lobata HOM05D007490 ORTHO05D008750 8.4e-19 98.2 186 41.4
Hma1.2p1_2266F.1_g318420 Hydrangea macrophylla HOM05D007490 ORTHO05D008750 2.4e-18 96.7 159 42.1
CARHR167640 Cardamine hirsuta HOM05D007490 ORTHO05D008750 9.3e-18 94.7 241 36.9
CsaV3_4G011720 Cucumis sativus L. HOM05D007490 ORTHO05D008750 1.6e-17 94.0 234 37.2
Gorai.007G360400 Gossypium raimondii HOM05D007490 ORTHO05D008750 6.0e-17 92.0 200 35.0
Carub.0005s2428 Capsella rubella HOM05D007490 ORTHO05D008750 1.7e-16 90.5 244 35.2
Nitab4.5_0005611g0010 Nicotiana tabacum HOM05D007490 ORTHO05D008750 1.7e-16 90.5 139 42.4
AT3G57440 Arabidopsis thaliana HOM05D007490 ORTHO05D008750 2.3e-16 90.1 243 36.2
Eucgr.A02350 Eucalyptus grandis HOM05D007490 ORTHO05D008750 2.3e-16 90.1 144 43.1
Thhalv10006439m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 2.3e-16 90.1 243 37.0
Glyma.02G183950 Glycine max HOM05D007490 ORTHO05D008750 2.3e-16 90.1 272 36.0
Gohir.D11G329000 Gossypium hirsutum HOM05D007490 ORTHO05D008750 2.3e-16 90.1 200 34.5
FAN09G1636 Fragaria x ananassa HOM05D007490 ORTHO05D008750 3.0e-16 89.7 122 45.9
CANSAT80G2830 Cannabis sativa HOM05D007490 ORTHO05D008750 3.9e-16 89.4 252 36.9
Solyc04g015730.3 Solanum lycopersicum HOM05D007490 ORTHO05D008750 5.1e-16 89.0 169 37.9
Gohir.A11G312500 Gossypium hirsutum HOM05D007490 ORTHO05D008750 1.1e-15 87.8 200 33.5
Rhsim03G0021300 Rhododendron simsii HOM05D007490 ORTHO05D008750 1.1e-15 87.8 208 38.9
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 1.1e-15 87.8 172 39.0
AL5G39010 Arabidopsis lyrata HOM05D007490 ORTHO05D008750 1.5e-15 87.4 243 35.0
Sp5g05160 Schrenkiella parvula HOM05D007490 ORTHO05D008750 1.5e-15 87.4 245 36.7
FAN14G3182 Fragaria x ananassa HOM05D007490 ORTHO05D008750 1.9e-15 87.0 118 47.5
ClCG00G005730 Citrullus lanatus HOM05D007490 ORTHO05D008750 4.3e-15 85.9 164 40.2
TWI74G0148 Tripterygium wilfordii HOM05D007490 ORTHO05D008750 4.3e-15 85.9 119 50.4
Cc06_g17080 Coffea canephora HOM05D007490 ORTHO05D008750 1.3e-14 84.3 166 38.6
Sed0009481 Sechium edule HOM05D007490 ORTHO05D008750 2.8e-14 83.2 265 34.0
A09p50330 Brassica napus HOM05D007490 ORTHO05D008750 6.2e-14 82.0 230 36.1
Ah.04g151770 Amaranthus hybridus HOM05D007490 ORTHO05D008750 1.1e-13 81.3 260 34.6
arahy.Tifrunner.gnm1.ann1.QGQ977 Arachis hypogaea HOM05D007490 ORTHO05D008750 1.4e-13 80.9 170 40.6
AUR62024445 Chenopodium quinoa HOM05D007490 ORTHO05D008750 1.8e-13 80.5 68 60.3
PGR004G2251 Punica granatum HOM05D007490 ORTHO05D008750 1.8e-13 80.5 185 35.7
MD12G1073500 Malus domestica HOM05D007490 ORTHO05D008750 2.4e-13 80.1 240 32.5
Aqoxy5G00272 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 3.1e-13 79.7 70 55.7
BcaC07g40383 Brassica carinata HOM05D007490 ORTHO05D008750 4.0e-13 79.3 229 37.1
AUR62026035 Chenopodium quinoa HOM05D007490 ORTHO05D008750 9.0e-13 78.2 67 59.7
Aqoxy3G01571 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 1.5e-12 77.4 157 41.4
FvH4_6g23771 Fragaria vesca HOM05D007490 ORTHO05D008750 1.5e-12 77.4 226 34.5
Nn7g36272 Nelumbo nucifera HOM05D007490 ORTHO05D008750 3.4e-12 76.3 205 33.7
Thhalv10017790m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 9.9e-12 74.7 224 32.6
Prupe.7G061400 Prunus persica HOM05D007490 ORTHO05D008750 1.3e-11 74.3 249 32.5
Sopen10g030750 Solanum pennellii HOM05D015445 ORTHO05D008750 1.3e-11 74.3 151 37.7
arahy.Tifrunner.gnm1.ann1.M65R33 Arachis hypogaea HOM05D007490 ORTHO05D008750 1.7e-11 73.9 276 33.7
BcaC07g40379 Brassica carinata HOM05D007490 ORTHO05D008750 1.7e-11 73.9 240 34.6
A03p23430 Brassica napus HOM05D007490 ORTHO05D008750 1.7e-11 73.9 220 35.9
SHI15744 Sapria himalayana HOM05D007490 ORTHO05D008750 2.2e-11 73.6 249 32.9
ECA236G0950 Erigeron canadensis HOM05D007490 ORTHO05D008750 3.8e-11 72.8 245 33.1
BolC3t15167H Brassica oleracea HOM05D007490 ORTHO05D008750 4.9e-11 72.4 219 35.6
BraA03t11560Z Brassica rapa HOM05D007490 ORTHO05D008750 4.9e-11 72.4 223 34.5
BcaNung06245 Brassica carinata HOM05D007490 ORTHO05D008750 6.4e-11 72.0 219 35.2
Potri.006G050900 Populus trichocarpa HOM05D007490 ORTHO05D008750 6.4e-11 72.0 210 33.8
Rhsim03G0022200 Rhododendron simsii HOM05D007490 ORTHO05D008750 6.4e-11 72.0 237 36.3
PSO384G3220 Papaver somniferum HOM05D007490 ORTHO05D008750 1.1e-10 71.2 174 37.4
C03p27950 Brassica napus HOM05D007490 ORTHO05D008750 1.4e-10 70.9 219 35.6
Cpa.g.sc92.48 Carica papaya HOM05D007490 ORTHO05D008750 9.3e-10 68.2 210 33.8
RcHm_v2.0_Chr3g0482221 Rosa chinensis HOM05D007490 ORTHO05D008750 1.0e-08 64.7 210 33.3
Actinidia09331 Actinidia chinensis HOM05D007490 ORTHO05D008750 2.3e-08 63.5 191 35.1
PSO339G3404 Papaver somniferum HOM05D007490 ORTHO05D008750 2.3e-08 63.5 194 30.9
SEGI_37898 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 2.3e-08 63.5 78 41.0
MD14G1067100 Malus domestica HOM05D007490 ORTHO05D008750 3.0e-08 63.2 71 50.7
SEGI_14290 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 3.0e-08 63.2 72 47.2
SEGI_34104 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 3.0e-08 63.2 72 47.2
CiPaw.09G038000 Carya illinoinensis HOM05D007490 ORTHO05D008750 3.9e-08 62.8 227 30.4
VMungo0720G0884 Vigna mungo HOM05D007490 ORTHO05D008750 5.1e-08 62.4 218 34.4
SEGI_24459 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 8.7e-08 61.6 49 55.1
Sabra06G0035600 Salix brachista HOM05D007490 ORTHO05D008750 1.1e-07 61.2 239 31.8
Haze_19861 Corylus avellana HOM05D007490 ORTHO05D008750 4.3e-07 59.3 234 32.1
Phvul.007G252900 Phaseolus vulgaris HOM05D007490 ORTHO05D008750 9.6e-07 58.2 238 31.5
Psat6g119920 Pisum sativum HOM05D007490 ORTHO05D008750 4.8e-06 55.8 222 32.4


User provided reference genes

Program Settings