Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold273G46432 Striga asiatica HOM05D005608 ORTHO05D007543 3.1e-164 581.6 273 100.0
Oeu017928.1 Olea europaea HOM05D005608 ORTHO05D007543 6.2e-149 530.8 273 89.7
MSTRG.26133 Avicennia marina HOM05D005608 ORTHO05D007543 7.6e-147 523.9 275 88.4
Nitab4.5_0001618g0150 Nicotiana tabacum HOM05D005608 ORTHO05D007543 2.2e-146 522.3 273 87.2
QL07p003736 Quercus lobata HOM05D005608 ORTHO05D007543 2.2e-146 522.3 272 87.1
PGSC0003DMG401012699 Solanum tuberosum HOM05D005608 ORTHO05D007543 3.2e-145 518.5 273 86.1
Hma1.2p1_0110F.1_g052840 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 9.3e-145 516.9 273 86.4
Hma1.2p1_1997F.1_g310445 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 9.3e-145 516.9 273 86.4
Solyc04g016360.3 Solanum lycopersicum HOM05D005608 ORTHO05D007543 2.1e-144 515.8 273 86.1
Potri.006G047000 Populus trichocarpa HOM05D005608 ORTHO05D007543 4.6e-144 514.6 273 85.7
GSVIVG01033232001 Vitis vinifera HOM05D005608 ORTHO05D007543 4.6e-144 514.6 272 85.7
CiPaw.09G040300 Carya illinoinensis HOM05D005608 ORTHO05D007543 6.0e-144 514.2 272 87.1
Sabra06G0032700 Salix brachista HOM05D005608 ORTHO05D007543 6.0e-144 514.2 273 85.7
Nitab4.5_0000826g0060 Nicotiana tabacum HOM05D005608 ORTHO05D007543 1.0e-143 513.5 273 86.1
Migut.J01725 Erythranthe guttata HOM05D005608 ORTHO05D007543 1.3e-143 513.1 273 86.1
Sopen04g008450 Solanum pennellii HOM05D005608 ORTHO05D007543 1.3e-143 513.1 273 85.3
CAN.G676.7 Capsicum annuum HOM05D005608 ORTHO05D007543 1.8e-143 512.7 273 85.0
TWI77G0221 Tripterygium wilfordii HOM05D005608 ORTHO05D007543 2.3e-143 512.3 273 85.3
PSO384G3225 Papaver somniferum HOM05D005608 ORTHO05D007543 5.1e-143 511.1 273 85.0
Actinidia39202 Actinidia chinensis HOM05D005608 ORTHO05D007543 8.7e-143 510.4 273 83.9
PSO339G6269 Papaver somniferum HOM05D005608 ORTHO05D007543 8.7e-143 510.4 273 85.0
MSTRG.19838 Avicennia marina HOM05D005608 ORTHO05D007543 1.9e-142 509.2 272 85.3
MD14G1077300 Malus domestica HOM05D005608 ORTHO05D007543 3.3e-142 508.4 272 83.5
Rhsim03G0028900 Rhododendron simsii HOM05D005608 ORTHO05D007543 4.3e-142 508.1 277 85.2
Manes.08G052000 Manihot esculenta HOM05D005608 ORTHO05D007543 5.6e-142 507.7 273 84.6
Hund24681 Selenicereus undatus HOM05D005608 ORTHO05D007543 7.4e-142 507.3 273 85.3
vmacro21968 Vaccinium macrocarpon HOM05D005608 ORTHO05D007543 9.6e-142 506.9 273 83.9
SalBow6G4364 Salvia bowleyana HOM05D005608 ORTHO05D007543 1.3e-141 506.5 273 84.2
EL10Ac3g07137 Beta vulgaris HOM05D005608 ORTHO05D007543 1.6e-141 506.1 273 85.0
CSS0026365 Camellia sinensis var. sinensis HOM05D005608 ORTHO05D007543 1.6e-141 506.1 273 83.2
Lj1A1125T63 Lonicera japonica HOM05D005608 ORTHO05D007543 1.6e-141 506.1 276 85.5
Prupe.7G053400 Prunus persica HOM05D005608 ORTHO05D007543 2.8e-141 505.4 274 83.9
Thecc.05G148100 Theobroma cacao HOM05D005608 ORTHO05D007543 3.7e-141 505.0 273 82.4
Haze_19791 Corylus avellana HOM05D005608 ORTHO05D007543 1.1e-140 503.4 272 84.6
Haze_19795 Corylus avellana HOM05D005608 ORTHO05D007543 1.1e-140 503.4 272 84.6
Duzib106G2070 Durio zibethinus HOM05D005608 ORTHO05D007543 1.1e-140 503.4 273 82.8
Gohir.A01G193800 Gossypium hirsutum HOM05D005608 ORTHO05D007543 1.1e-140 503.4 273 83.2
MELO3C026333.2 Cucumis melo HOM05D005608 ORTHO05D007543 2.4e-140 502.3 272 82.4
Nn2g15128 Nelumbo nucifera HOM05D005608 ORTHO05D007543 3.1e-140 501.9 273 84.2
TAR633G2234 Trochodendron aralioides HOM05D005608 ORTHO05D007543 4.0e-140 501.5 273 84.2
RcHm_v2.0_Chr3g0483631 Rosa chinensis HOM05D005608 ORTHO05D007543 6.9e-140 500.7 272 83.8
TAR369G0715 Trochodendron aralioides HOM05D005608 ORTHO05D007543 6.9e-140 500.7 270 84.8
CANSAT80G2626 Cannabis sativa HOM05D005608 ORTHO05D007543 9.0e-140 500.4 273 84.6
Cfa016779 Carpinus fangiana HOM05D005608 ORTHO05D007543 9.0e-140 500.4 272 84.2
Ciclev10005572m.g Citrus clementina HOM05D005608 ORTHO05D007543 1.2e-139 500.0 273 83.9
Phvul.007G250500 Phaseolus vulgaris HOM05D005608 ORTHO05D007543 1.2e-139 500.0 272 82.4
Sed0023334 Sechium edule HOM05D005608 ORTHO05D007543 1.2e-139 500.0 272 82.4
Atru.chr1.1230 Acer truncatum HOM05D005608 ORTHO05D007543 1.5e-139 499.6 273 82.4
Gohir.D01G184100 Gossypium hirsutum HOM05D005608 ORTHO05D007543 2.0e-139 499.2 273 83.5
Gorai.002G227600 Gossypium raimondii HOM05D005608 ORTHO05D007543 2.0e-139 499.2 273 83.5
Cc06_g18100 Coffea canephora HOM05D005608 ORTHO05D007543 5.8e-139 497.7 272 83.8
Lj5g0018305 Lotus japonicus HOM05D005608 ORTHO05D007543 7.6e-139 497.3 274 82.1
CsaV3_4G027510 Cucumis sativus L. HOM05D005608 ORTHO05D007543 9.9e-139 496.9 272 81.6
DCAR_013613 Daucus carota HOM05D005608 ORTHO05D007543 1.3e-138 496.5 272 81.2
THA.LOC104801987 Tarenaya hassleriana HOM05D005608 ORTHO05D007543 1.7e-138 496.1 272 83.8
Aqoxy2G00245 Aquilegia oxysepala HOM05D005608 ORTHO05D007543 2.2e-138 495.7 273 82.8
TAR369G0194 Trochodendron aralioides HOM05D005608 ORTHO05D007543 2.2e-138 495.7 270 84.1
HanXRQChr04g0125051 Helianthus annuus HOM05D005608 ORTHO05D007543 2.9e-138 495.4 272 83.5
ECA236G2378 Erigeron canadensis HOM05D005608 ORTHO05D007543 6.4e-138 494.2 271 83.4
CANSAT80G0897 Cannabis sativa HOM05D005608 ORTHO05D007543 5.5e-137 491.1 278 82.7
Sc19g0008540 Simmondsia chinensis HOM05D005608 ORTHO05D007543 7.1e-137 490.7 273 81.0
Eucgr.K02019 Eucalyptus grandis HOM05D005608 ORTHO05D007543 9.3e-137 490.3 275 82.9
Aa31LG1G23580 Aethionema arabicum HOM05D005608 ORTHO05D007543 1.2e-136 490.0 274 82.1
Lalb_Chr06g0173501 Lupinus albus HOM05D005608 ORTHO05D007543 1.2e-136 490.0 272 82.0
VMungo0720G2960 Vigna mungo HOM05D005608 ORTHO05D007543 1.6e-136 489.6 272 80.5
Glyma.02G186700 Glycine max HOM05D005608 ORTHO05D007543 6.0e-136 487.6 272 80.5
Thhalv10017045m.g Eutrema salsugineum HOM05D005608 ORTHO05D007543 1.0e-135 486.9 273 81.7
Glyma.10G106900 Glycine max HOM05D005608 ORTHO05D007543 1.0e-135 486.9 270 80.4
TPR.G19657 Trifolium pratense HOM05D005608 ORTHO05D007543 1.0e-135 486.9 271 80.8
FvH4_6g24520 Fragaria vesca HOM05D005608 ORTHO05D007543 1.8e-135 486.1 272 81.2
BcaNung04068 Brassica carinata HOM05D005608 ORTHO05D007543 2.3e-135 485.7 273 81.0
FAN02G1028 Fragaria x ananassa HOM05D005608 ORTHO05D007543 2.3e-135 485.7 272 81.2
FAN05G0975 Fragaria x ananassa HOM05D005608 ORTHO05D007543 2.3e-135 485.7 274 81.4
Medtr4g008660 Medicago truncatula HOM05D005608 ORTHO05D007543 3.0e-135 485.3 272 80.9
Peaxi162Scf00130g00829 Petunia axillaris HOM05D005608 ORTHO05D007543 3.0e-135 485.3 273 81.0
Medtr1g052175 Medicago truncatula HOM05D005608 ORTHO05D007543 1.5e-134 483.0 272 80.5
arahy.Tifrunner.gnm1.ann1.RCN63F Arachis hypogaea HOM05D005608 ORTHO05D007543 2.5e-134 482.3 272 80.5
CARHR136660 Cardamine hirsuta HOM05D005608 ORTHO05D007543 4.3e-134 481.5 273 81.0
AL4G39630 Arabidopsis lyrata HOM05D005608 ORTHO05D007543 5.6e-134 481.1 273 80.6
Sp4g23810 Schrenkiella parvula HOM05D005608 ORTHO05D007543 5.6e-134 481.1 273 81.0
Peaxi162Scf00130g00828 Petunia axillaris HOM05D005608 ORTHO05D007543 9.6e-134 480.3 273 82.4
Ca_12257_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 2.1e-133 479.2 278 79.1
A03p23310 Brassica napus HOM05D005608 ORTHO05D007543 4.8e-133 478.0 273 81.0
BraA03t11549Z Brassica rapa HOM05D005608 ORTHO05D007543 4.8e-133 478.0 273 81.0
FAN14G1555 Fragaria x ananassa HOM05D005608 ORTHO05D007543 8.2e-133 477.2 275 79.6
BcaC01g05330 Brassica carinata HOM05D005608 ORTHO05D007543 1.4e-132 476.5 273 80.2
A05p02350 Brassica napus HOM05D005608 ORTHO05D007543 1.4e-132 476.5 274 80.7
AUR62026096 Chenopodium quinoa HOM05D005608 ORTHO05D007543 1.4e-132 476.5 290 76.9
Nitab4.5_0000636g0050 Nicotiana tabacum HOM05D005608 ORTHO05D007543 1.4e-132 476.5 273 81.3
AT2G41530 Arabidopsis thaliana HOM05D005608 ORTHO05D007543 2.4e-132 475.7 273 79.9
BcaB01g03463 Brassica carinata HOM05D005608 ORTHO05D007543 2.4e-132 475.7 273 80.6
BraA05t19229Z Brassica rapa HOM05D005608 ORTHO05D007543 3.1e-132 475.3 274 80.7
C03p27830 Brassica napus HOM05D005608 ORTHO05D007543 4.0e-132 474.9 273 80.2
Lsat_1_v5_gn_8_82180 Lactuca sativa HOM05D005608 ORTHO05D007543 4.0e-132 474.9 320 71.6
C04p02790 Brassica napus HOM05D005608 ORTHO05D007543 5.3e-132 474.6 274 80.7
BolC4t21919H Brassica oleracea HOM05D005608 ORTHO05D007543 5.3e-132 474.6 274 80.7
BolC3t15154H Brassica oleracea HOM05D005608 ORTHO05D007543 6.9e-132 474.2 273 79.9
Carub.0004s2382 Capsella rubella HOM05D005608 ORTHO05D007543 2.0e-131 472.6 273 79.9
Ca_12243_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 1.0e-130 470.3 282 77.0
arahy.Tifrunner.gnm1.ann1.QZL5XH Arachis hypogaea HOM05D005608 ORTHO05D007543 3.8e-130 468.4 286 75.9
Sed0008486 Sechium edule HOM05D005608 ORTHO05D007543 5.5e-129 464.5 272 76.5
CDE05G0378 Ceratophyllum demersum HOM05D005608 ORTHO05D007543 6.0e-128 461.1 270 74.8
ClCG04G003700 Citrullus lanatus HOM05D005608 ORTHO05D007543 6.0e-128 461.1 272 77.2
HPP92_001434 Vanilla planifolia HOM05D005608 ORTHO05D007543 1.3e-127 459.9 270 75.9
unitig_21.g20519 Utricularia gibba HOM05D005608 ORTHO05D007543 3.1e-124 448.7 237 88.2
SEGI_13354 Sequoiadendron giganteum HOM05D005608 ORTHO05D007543 2.0e-123 446.0 271 74.9
Os01g0939700 Oryza sativa ssp. japonica HOM05D005608 ORTHO05D007543 4.5e-123 444.9 270 73.7
ATR0721G011 Amborella trichopoda HOM05D005608 ORTHO05D007543 2.5e-121 439.1 267 73.8
Cpa.g.sc182.15 Carica papaya HOM05D005608 ORTHO05D007543 1.2e-120 436.8 234 82.9
Sed0024564 Sechium edule HOM05D005608 ORTHO05D007543 2.7e-120 435.6 272 72.1
AUR62024510 Chenopodium quinoa HOM05D005608 ORTHO05D007543 6.7e-119 431.0 236 83.9
Eucgr.K01713 Eucalyptus grandis HOM05D005608 ORTHO05D007543 6.7e-119 431.0 275 73.8
MBI19_g29889_MAGBIO Magnolia biondii HOM05D005608 ORTHO05D007543 3.4e-115 418.7 234 79.9
Pp3c11_8660 Physcomitrium patens HOM05D005608 ORTHO05D007543 1.6e-112 409.8 274 66.8
CBR_g12387 Chara braunii HOM05D005608 ORTHO05D007543 2.6e-107 392.5 271 68.3
MD12G1082500 Malus domestica HOM05D005608 ORTHO05D007543 3.5e-107 392.1 213 84.5
Mapoly0020s0136 Marchantia polymorpha HOM05D005608 ORTHO05D007543 4.5e-107 391.7 272 66.9
SMO174G0027 Selaginella moellendorffii HOM05D005608 ORTHO05D007543 4.7e-104 381.7 272 65.8
Dinv39657 Davidia involucrata HOM05D005608 ORTHO05D007543 4.5e-99 365.2 184 88.6
Zm00001eb363240 Zea mays HOM05D005608 ORTHO05D007543 3.3e-94 349.0 213 74.2
SalBow6G3992 Salvia bowleyana HOM05D005608 ORTHO05D007543 8.3e-93 344.4 289 60.9
Cre03.g158800 Chlamydomonas reinhardtii HOM05D005608 ORTHO05D007543 7.0e-92 341.3 274 59.5
COL.COLO4_32782 Corchorus olitorius HOM05D005608 ORTHO05D007543 1.7e-90 336.7 273 60.4
Haze_27232 Corylus avellana HOM05D005608 ORTHO05D007543 5.7e-78 295.0 265 52.5
Psat6g091560 Pisum sativum HOM05D005608 ORTHO05D007543 1.1e-76 290.8 159 82.4
TPR.G19661 Trifolium pratense HOM05D005608 ORTHO05D007543 5.4e-76 288.5 160 81.2
Haze_26706 Corylus avellana HOM05D005608 ORTHO05D007543 8.3e-69 264.6 266 48.9
MCO09G089 Micromonas commoda HOM05D000219 ORTHO05D000226 3.6e-64 249.2 272 46.7
Medtr0931s0010 Medicago truncatula HOM05D005608 ORTHO05D044358 3.1e-63 246.1 229 52.8
PRCOL_00003320 Prasinoderma coloniale HOM05D000219 ORTHO05D000226 4.4e-62 242.3 278 46.4
Medtr1g052165 Medicago truncatula HOM05D005608 ORTHO05D048895 2.3e-50 203.4 114 79.8
TPR.G23055 Trifolium pratense HOM05D005608 ORTHO05D048895 1.9e-44 183.7 103 78.6
Zm00001eb010250 Zea mays HOM05D005608 ORTHO05D007543 5.5e-20 102.4 78 61.5
SEGI_35043 Sequoiadendron giganteum HOM05D005608 ORTHO05D384886 1.0e-13 81.6 69 56.5
Zm00001eb141600 Zea mays HOM05D005608 ORTHO05D007543 3.8e-13 79.7 55 65.5
Pp3c1_10050 Physcomitrium patens HOM05D005608 ORTHO05D319324 3.9e-10 69.7 56 53.6
PSO765G0043 Papaver somniferum HOM05D005608 ORTHO05D302623 1.5e-06 57.8 47 61.7


User provided reference genes

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