Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold272G46374 Striga asiatica HOM05D007616 ORTHO05D008751 6.4e-103 377.5 199 100.0
Oeu000131.1 Olea europaea HOM05D007616 ORTHO05D008751 8.8e-44 181.0 209 55.5
MSTRG.20315 Avicennia marina HOM05D007616 ORTHO05D008751 1.0e-39 167.5 231 51.5
Migut.B00786 Erythranthe guttata HOM05D007616 ORTHO05D008751 2.6e-35 152.9 244 45.9
DCAR_025356 Daucus carota HOM05D007616 ORTHO05D008751 1.3e-34 150.6 234 45.7
Gohir.A01G182700 Gossypium hirsutum HOM05D007616 ORTHO05D008751 6.3e-34 148.3 233 46.4
Gohir.D01G173800 Gossypium hirsutum HOM05D007616 ORTHO05D008751 6.3e-34 148.3 237 46.0
Gorai.002G215900 Gossypium raimondii HOM05D007616 ORTHO05D008751 6.3e-34 148.3 237 46.0
Peaxi162Scf00011g00934 Petunia axillaris HOM05D007616 ORTHO05D008751 1.8e-33 146.7 259 44.4
Solyc01g103700.3 Solanum lycopersicum HOM05D007616 ORTHO05D008751 2.4e-33 146.4 222 45.9
Sopen01g046110 Solanum pennellii HOM05D007616 ORTHO05D008751 2.4e-33 146.4 216 45.8
PGSC0003DMG400024897 Solanum tuberosum HOM05D007616 ORTHO05D008751 3.1e-33 146.0 228 45.2
COL.COLO4_17740 Corchorus olitorius HOM05D007616 ORTHO05D008751 9.1e-33 144.4 235 44.7
Potri.004G222800 Populus trichocarpa HOM05D007616 ORTHO05D008751 9.1e-33 144.4 241 46.1
Nitab4.5_0002596g0080 Nicotiana tabacum HOM05D007616 ORTHO05D008751 1.2e-32 144.1 257 44.0
Duzib132G0975 Durio zibethinus HOM05D007616 ORTHO05D008751 2.2e-31 139.8 223 46.6
Nitab4.5_0000948g0040 Nicotiana tabacum HOM05D007616 ORTHO05D008751 2.2e-31 139.8 255 42.4
Thecc.02G023400 Theobroma cacao HOM05D007616 ORTHO05D008751 5.0e-31 138.7 231 45.9
Cc02_g23010 Coffea canephora HOM05D007616 ORTHO05D008751 4.2e-30 135.6 235 45.1
Potri.003G009400 Populus trichocarpa HOM05D007616 ORTHO05D008751 4.2e-30 135.6 219 47.5
Oeu058636.1 Olea europaea HOM05D007616 ORTHO05D008751 5.5e-30 135.2 212 46.7
CSS0021835 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 1.0e-28 131.0 219 42.9
HanXRQChr06g0181301 Helianthus annuus HOM05D007616 ORTHO05D008751 1.4e-28 130.6 208 43.8
CSS0006253 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 6.8e-28 128.3 219 42.5
Glyma.12G167600 Glycine max HOM05D007616 ORTHO05D008751 6.8e-28 128.3 209 43.5
SalBow3G1194 Salvia bowleyana HOM05D007616 ORTHO05D008751 8.8e-28 127.9 218 44.0
Lalb_Chr18g0061041 Lupinus albus HOM05D007616 ORTHO05D008751 2.6e-27 126.3 248 39.5
FvH4_6g51930 Fragaria vesca HOM05D007616 ORTHO05D008751 4.4e-27 125.6 241 40.2
FAN14G2995 Fragaria x ananassa HOM05D007616 ORTHO05D008751 5.7e-27 125.2 241 40.2
Sabra03G0004800 Salix brachista HOM05D007616 ORTHO05D008751 5.7e-27 125.2 229 45.4
Actinidia06472 Actinidia chinensis HOM05D007616 ORTHO05D008751 9.8e-27 124.4 194 47.9
Eucgr.I02753 Eucalyptus grandis HOM05D007616 ORTHO05D008751 1.3e-26 124.0 220 44.5
CiPaw.05G005800 Carya illinoinensis HOM05D007616 ORTHO05D008751 4.9e-26 122.1 222 45.0
Manes.10G119800 Manihot esculenta HOM05D007616 ORTHO05D008751 8.3e-26 121.3 219 43.8
CANSAT54G0672 Cannabis sativa HOM05D007616 ORTHO05D008751 1.1e-25 120.9 217 44.2
arahy.Tifrunner.gnm1.ann1.4HSG2Y Arachis hypogaea HOM05D007616 ORTHO05D008751 1.4e-25 120.6 226 40.7
arahy.Tifrunner.gnm1.ann1.D7HVAZ Arachis hypogaea HOM05D007616 ORTHO05D008751 1.8e-25 120.2 216 44.4
FAN09G2205 Fragaria x ananassa HOM05D007616 ORTHO05D008751 2.4e-25 119.8 241 39.4
Lsat_1_v5_gn_9_120740 Lactuca sativa HOM05D007616 ORTHO05D008751 5.4e-25 118.6 195 44.6
Phvul.006G218400 Phaseolus vulgaris HOM05D007616 ORTHO05D008751 7.0e-25 118.2 208 43.3
Nn5g27765 Nelumbo nucifera HOM05D007616 ORTHO05D008751 9.2e-25 117.9 225 40.4
RcHm_v2.0_Chr2g0173411 Rosa chinensis HOM05D007616 ORTHO05D008751 9.2e-25 117.9 246 39.4
Duzib248G0210 Durio zibethinus HOM05D007616 ORTHO05D008751 1.6e-24 117.1 220 43.2
CAN.G798.53 Capsicum annuum HOM05D007616 ORTHO05D008751 2.7e-24 116.3 234 39.7
VMungo0540G1916 Vigna mungo HOM05D007616 ORTHO05D008751 2.3e-23 113.2 194 44.3
QL02p100178 Quercus lobata HOM05D007616 ORTHO05D008751 2.9e-23 112.8 258 39.1
Psat1g223480 Pisum sativum HOM05D007616 ORTHO05D008751 5.0e-23 112.1 263 38.0
Sed0008181 Sechium edule HOM05D007616 ORTHO05D008751 5.0e-23 112.1 218 39.9
ECA236G1993 Erigeron canadensis HOM05D007616 ORTHO05D008751 6.6e-23 111.7 206 41.3
Prupe.1G577200 Prunus persica HOM05D007616 ORTHO05D008751 6.6e-23 111.7 240 40.4
Aqoxy6G00124 Aquilegia oxysepala HOM05D007616 ORTHO05D008751 1.5e-22 110.5 226 37.6
Atru.chr4.2705 Acer truncatum HOM05D007616 ORTHO05D008751 1.9e-22 110.2 234 41.5
Ca_00046_v3 Cicer arietinum L. HOM05D001654 ORTHO05D002773 4.3e-22 109.0 162 48.1
Medtr2g005910 Medicago truncatula HOM05D007616 ORTHO05D008751 5.6e-22 108.6 193 43.0
ClCG11G013320 Citrullus lanatus HOM05D007616 ORTHO05D008751 7.3e-22 108.2 224 40.2
Sabra01G0168700 Salix brachista HOM05D007616 ORTHO05D008751 2.1e-21 106.7 236 40.7
TPR.G2142 Trifolium pratense HOM05D007616 ORTHO05D008751 2.8e-21 106.3 246 36.6
Potri.019G021000 Populus trichocarpa HOM05D007616 ORTHO05D008751 1.0e-20 104.4 205 43.4
Manes.07G023000 Manihot esculenta HOM05D007616 ORTHO05D008751 1.8e-20 103.6 241 37.8
Rhsim05G0186200 Rhododendron simsii HOM05D007616 ORTHO05D008751 2.3e-20 103.2 218 41.3
CiPaw.06G173100 Carya illinoinensis HOM05D007616 ORTHO05D008751 3.0e-20 102.8 208 41.3
Nn1g08457 Nelumbo nucifera HOM05D007616 ORTHO05D008751 3.0e-20 102.8 213 38.0
Lj6g0028114 Lotus japonicus HOM05D007616 ORTHO05D008751 4.0e-20 102.4 259 35.9
MELO3C011824.2 Cucumis melo HOM05D007616 ORTHO05D008751 8.9e-20 101.3 205 38.5
MD08G1240500 Malus domestica HOM05D007616 ORTHO05D008751 7.5e-19 98.2 255 36.5
PSO782G2099 Papaver somniferum HOM05D007616 ORTHO05D008751 9.8e-19 97.8 245 35.1
PSO170G4229 Papaver somniferum HOM05D007616 ORTHO05D008751 1.3e-18 97.4 245 34.7
MD15G1433700 Malus domestica HOM05D007616 ORTHO05D008751 1.7e-18 97.1 258 33.7
TWI14G0953 Tripterygium wilfordii HOM05D007616 ORTHO05D008751 4.9e-18 95.5 208 38.9
unitig_21.g20913 Utricularia gibba HOM05D007616 ORTHO05D008751 1.4e-17 94.0 186 36.0
GSVIVG01023272001 Vitis vinifera HOM05D007616 ORTHO05D008751 4.1e-17 92.4 210 39.0
HPP92_005665 Vanilla planifolia HOM05D007616 ORTHO05D008751 1.6e-16 90.5 225 35.1
ECA240G3878 Erigeron canadensis HOM05D007616 ORTHO05D008751 2.7e-16 89.7 215 37.2
THA.LOC104816807 Tarenaya hassleriana HOM05D007616 ORTHO05D008751 2.3e-15 86.7 280 34.3
Lsat_1_v5_gn_7_76421 Lactuca sativa HOM05D007616 ORTHO05D008751 1.1e-14 84.3 218 36.7
Dinv07475 Davidia involucrata HOM05D001654 ORTHO05D002773 1.8e-12 77.0 92 55.4
Sc20g0001190 Simmondsia chinensis HOM05D007616 ORTHO05D008751 8.9e-12 74.7 167 38.3
ATR0090G002 Amborella trichopoda HOM05D007616 ORTHO05D008751 2.6e-11 73.2 169 37.3
CsaV3_5G029830 Cucumis sativus L. HOM05D001654 ORTHO05D002773 2.6e-11 73.2 175 36.0
Dinv31838 Davidia involucrata HOM05D002661 ORTHO05D002786 2.6e-11 73.2 182 30.8
Cfa004508 Carpinus fangiana HOM05D007616 ORTHO05D008751 3.4e-11 72.8 207 34.8
Ciclev10002504m.g Citrus clementina HOM05D002661 ORTHO05D002786 4.4e-11 72.4 198 31.3
Hma1.2p1_1108F.1_g257940 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 5.8e-11 72.0 220 32.3
Cfa006970 Carpinus fangiana HOM05D002668 ORTHO05D003295 1.3e-10 70.9 197 33.0
Haze_10065 Corylus avellana HOM05D001654 ORTHO05D002773 1.3e-10 70.9 208 33.2
TAR381G1099 Trochodendron aralioides HOM05D002661 ORTHO05D002786 2.2e-10 70.1 192 31.8
Haze_22627 Corylus avellana HOM05D002661 ORTHO05D002786 3.7e-10 69.3 201 30.8
TAR624G1080 Trochodendron aralioides HOM05D007616 ORTHO05D008751 3.7e-10 69.3 63 57.1
Dinv39512 Davidia involucrata HOM05D002661 ORTHO05D002786 4.9e-10 68.9 175 30.3
HanXRQChr14g0430361 Helianthus annuus HOM05D002661 ORTHO05D002786 4.9e-10 68.9 174 32.2
CiPaw.08G131700 Carya illinoinensis HOM05D002661 ORTHO05D002786 6.4e-10 68.6 196 32.1
MD08G1013500 Malus domestica HOM05D002661 ORTHO05D002786 1.1e-09 67.8 210 31.0
vmacro04348 Vaccinium macrocarpon HOM05D002661 ORTHO05D002786 1.1e-09 67.8 189 31.2
Peaxi162Scf00400g00048 Petunia axillaris HOM05D002661 ORTHO05D002786 1.9e-09 67.0 197 31.0
Aqoxy4G02812 Aquilegia oxysepala HOM05D002661 ORTHO05D002786 2.4e-09 66.6 194 29.9
Prupe.1G366100 Prunus persica HOM05D002661 ORTHO05D002786 2.4e-09 66.6 204 30.4
Rhsim07G0246900 Rhododendron simsii HOM05D002661 ORTHO05D002786 2.4e-09 66.6 192 30.2
Potri.002G023000 Populus trichocarpa HOM05D002661 ORTHO05D002786 3.2e-09 66.2 194 28.9
Cfa013943 Carpinus fangiana HOM05D002661 ORTHO05D002786 5.4e-09 65.5 209 30.1
Nitab4.5_0000337g0140 Nicotiana tabacum HOM05D002661 ORTHO05D002786 9.2e-09 64.7 194 29.4
AL2G17970 Arabidopsis lyrata HOM05D012662 ORTHO05D008751 1.6e-08 63.9 271 29.9
AUR62034500 Chenopodium quinoa HOM05D007616 ORTHO05D008751 1.6e-08 63.9 250 29.6
FAN05G5322 Fragaria x ananassa HOM05D007616 ORTHO05D008751 1.6e-08 63.9 98 45.9
PGR142G0501 Punica granatum HOM05D007616 ORTHO05D008751 1.6e-08 63.9 106 39.6
CDE05G2569 Ceratophyllum demersum HOM05D002661 ORTHO05D002786 2.0e-08 63.5 206 30.1
Oeu046268.1 Olea europaea HOM05D000745 ORTHO05D000641 2.0e-08 63.5 189 29.6
Zm00001eb202050 Zea mays HOM05D007616 ORTHO05D008751 2.0e-08 63.5 262 29.4
Peaxi162Scf00438g00717 Petunia axillaris HOM05D002661 ORTHO05D002786 2.7e-08 63.2 185 30.8
Sabra05G0184300 Salix brachista HOM05D002661 ORTHO05D002786 2.7e-08 63.2 191 27.2
Actinidia28594 Actinidia chinensis HOM05D002661 ORTHO05D002786 3.5e-08 62.8 179 29.6
BcaC02g10705 Brassica carinata HOM05D007616 ORTHO05D008751 3.5e-08 62.8 191 32.5
Os11g0195800 Oryza sativa ssp. japonica HOM05D007616 ORTHO05D008751 3.5e-08 62.8 272 27.2
Psat5g013240 Pisum sativum HOM05D002661 ORTHO05D002786 3.5e-08 62.8 201 30.3
AUR62037671 Chenopodium quinoa HOM05D002239 ORTHO05D002408 4.6e-08 62.4 251 28.3
CDE05G2590 Ceratophyllum demersum HOM05D002661 ORTHO05D002786 6.0e-08 62.0 210 29.5
EL10Ac1g02294 Beta vulgaris HOM05D002661 ORTHO05D002786 1.0e-07 61.2 204 29.4
COL.COLO4_26155 Corchorus olitorius HOM05D002661 ORTHO05D002786 1.0e-07 61.2 209 31.1
Duzib041G0251 Durio zibethinus HOM05D002661 ORTHO05D002786 1.3e-07 60.8 194 27.3
Nn5g30157 Nelumbo nucifera HOM05D002661 ORTHO05D002786 1.3e-07 60.8 196 27.6
Lj4A25T51 Lonicera japonica HOM05D002661 ORTHO05D002786 1.7e-07 60.5 198 29.3
QL02p011493 Quercus lobata HOM05D002661 ORTHO05D002786 2.3e-07 60.1 198 29.3
Lsat_1_v5_gn_2_10300 Lactuca sativa HOM05D002661 ORTHO05D002786 3.0e-07 59.7 190 30.5
Solyc04g081390.4 Solanum lycopersicum HOM05D002661 ORTHO05D002786 3.0e-07 59.7 207 29.0
Dinv40084 Davidia involucrata HOM05D002661 ORTHO05D002786 3.9e-07 59.3 192 29.2
Hma1.2p1_0427F.1_g150730 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 3.9e-07 59.3 120 43.3
MBI05_g15357_MAGBIO Magnolia biondii HOM05D002661 ORTHO05D002786 3.9e-07 59.3 195 30.3
PGSC0003DMG400009934 Solanum tuberosum HOM05D002661 ORTHO05D002786 3.9e-07 59.3 193 29.5
Ca_15484_v3 Cicer arietinum L. HOM05D002661 ORTHO05D002786 5.0e-07 58.9 217 29.0
Ciclev10010690m.g Citrus clementina HOM05D002661 ORTHO05D002786 5.0e-07 58.9 187 31.0
C01p35720 Brassica napus HOM05D007616 ORTHO05D008751 6.6e-07 58.5 128 40.6
BolC1t03530H Brassica oleracea HOM05D007616 ORTHO05D008751 6.6e-07 58.5 128 40.6
THA.LOC104811385 Tarenaya hassleriana HOM05D002661 ORTHO05D002786 6.6e-07 58.5 196 28.6
FAN20G0494 Fragaria x ananassa HOM05D002661 ORTHO05D002786 1.5e-06 57.4 202 28.2
MD15G1013000 Malus domestica HOM05D002661 ORTHO05D002786 1.5e-06 57.4 204 29.4
QL11p039511 Quercus lobata HOM05D007616 ORTHO05D008751 1.5e-06 57.4 59 59.3
MSTRG.2712 Avicennia marina HOM05D002661 ORTHO05D002786 2.5e-06 56.6 212 30.7
CSS0015710 Camellia sinensis var. sinensis HOM05D002661 ORTHO05D002786 2.5e-06 56.6 192 30.2
Cpa.g.sc6.246 Carica papaya HOM05D002661 ORTHO05D002786 2.5e-06 56.6 194 29.4
MSTRG.23411 Avicennia marina HOM05D002661 ORTHO05D002786 3.3e-06 56.2 198 28.8
THA.LOC104807494 Tarenaya hassleriana HOM05D002661 ORTHO05D002786 3.3e-06 56.2 101 39.6
Zm00001eb089230 Zea mays HOM05D002661 ORTHO05D002786 3.3e-06 56.2 171 32.7
Cc10_g01730 Coffea canephora HOM05D002661 ORTHO05D002786 4.3e-06 55.8 111 36.0
DCAR_013866 Daucus carota HOM05D002661 ORTHO05D002786 4.3e-06 55.8 195 26.7
Oeu005316.1 Olea europaea HOM05D002661 ORTHO05D002786 4.3e-06 55.8 203 31.0
Phvul.009G016600 Phaseolus vulgaris HOM05D002661 ORTHO05D002786 5.6e-06 55.5 195 28.7
Gorai.009G270100 Gossypium raimondii HOM05D002661 ORTHO05D002786 7.3e-06 55.1 197 25.9
Peaxi162Scf00034g02717 Petunia axillaris HOM05D002661 ORTHO05D002786 7.3e-06 55.1 110 37.3
vmacro19869 Vaccinium macrocarpon HOM05D007616 ORTHO05D008751 7.3e-06 55.1 265 27.2
vmacro21919 Vaccinium macrocarpon HOM05D002661 ORTHO05D002786 7.3e-06 55.1 197 29.9
Zm00001eb391910 Zea mays HOM05D036147 ORTHO05D008751 7.3e-06 55.1 220 29.5
Psat2g154760 Pisum sativum HOM05D002661 ORTHO05D002786 9.5e-06 54.7 206 30.6


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