Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold272G46362 Striga asiatica HOM05D007992 ORTHO05D010086 8.9e-84 313.5 156 100.0
unitig_26.g9026 Utricularia gibba HOM05D007992 ORTHO05D010086 1.0e-07 60.8 30 90.0
CAN.G798.45 Capsicum annuum HOM05D007992 ORTHO05D010086 1.4e-07 60.5 29 93.1
Glyma.17G000900 Glycine max HOM05D007992 ORTHO05D010086 1.4e-07 60.5 29 93.1
Phvul.003G074700 Phaseolus vulgaris HOM05D007992 ORTHO05D010086 1.4e-07 60.5 29 93.1
Potri.003G009800 Populus trichocarpa HOM05D007992 ORTHO05D010086 1.4e-07 60.5 29 93.1
PGR142G0328 Punica granatum HOM05D007992 ORTHO05D010086 1.4e-07 60.5 43 69.8
PGSC0003DMG400024927 Solanum tuberosum HOM05D007992 ORTHO05D010086 1.4e-07 60.5 29 93.1
Aa31LG1G5180 Aethionema arabicum HOM05D007992 ORTHO05D010086 1.8e-07 60.1 47 66.0
Migut.B00791 Erythranthe guttata HOM05D007992 ORTHO05D010086 1.8e-07 60.1 29 93.1
Manes.10G120300 Manihot esculenta HOM05D007992 ORTHO05D010086 1.8e-07 60.1 29 93.1
TPR.G17560 Trifolium pratense HOM05D007992 ORTHO05D010086 1.8e-07 60.1 29 93.1
AT1G09794 Arabidopsis thaliana HOM05D007992 ORTHO05D010086 4.0e-07 58.9 29 89.7
Carub.0001s0914 Capsella rubella HOM05D007992 ORTHO05D010086 4.0e-07 58.9 29 89.7
CARHR009770 Cardamine hirsuta HOM05D007992 ORTHO05D010086 4.0e-07 58.9 29 89.7
Duzib132G0994 Durio zibethinus HOM05D007992 ORTHO05D010086 4.0e-07 58.9 29 89.7
Thhalv10009288m.g Eutrema salsugineum HOM05D007992 ORTHO05D010086 4.0e-07 58.9 29 89.7
Sp1g08390 Schrenkiella parvula HOM05D007992 ORTHO05D010086 4.0e-07 58.9 29 89.7
THA.LOC104820254 Tarenaya hassleriana HOM05D007992 ORTHO05D010086 4.0e-07 58.9 29 89.7
Sed0016814 Sechium edule HOM05D007992 ORTHO05D010086 5.2e-07 58.5 29 89.7
A06p06460 Brassica napus HOM05D007992 ORTHO05D010086 6.7e-07 58.2 47 61.7
C05p07870 Brassica napus HOM05D007992 ORTHO05D010086 6.7e-07 58.2 47 61.7
BolC5t29538H Brassica oleracea HOM05D007992 ORTHO05D010086 6.7e-07 58.2 47 61.7
BraA06t23857Z Brassica rapa HOM05D007992 ORTHO05D010086 6.7e-07 58.2 47 61.7
Eucgr.I02752 Eucalyptus grandis HOM05D007992 ORTHO05D010086 6.7e-07 58.2 29 86.2
Nn5g27747 Nelumbo nucifera HOM05D007992 ORTHO05D010086 6.7e-07 58.2 29 86.2
Oeu045939.1 Olea europaea HOM05D007992 ORTHO05D010086 6.7e-07 58.2 29 93.1
QL02p099856 Quercus lobata HOM05D007992 ORTHO05D010086 6.7e-07 58.2 29 86.2
QL93p0310_0002 Quercus lobata HOM05D007992 ORTHO05D010086 6.7e-07 58.2 29 86.2
Thecc.02G025300 Theobroma cacao HOM05D007992 ORTHO05D010086 1.2e-06 57.4 29 86.2
arahy.Tifrunner.gnm1.ann1.5LAZ71 Arachis hypogaea HOM05D007992 ORTHO05D010086 1.5e-06 57.0 29 86.2
arahy.Tifrunner.gnm1.ann1.UKT1PL Arachis hypogaea HOM05D007992 ORTHO05D010086 1.5e-06 57.0 29 86.2
Migut.B00795 Erythranthe guttata HOM05D007992 ORTHO05D010086 2.0e-06 56.6 29 86.2
Medtr4g134900 Medicago truncatula HOM05D007992 ORTHO05D010086 2.0e-06 56.6 29 86.2
TWI59G0747 Tripterygium wilfordii HOM05D007992 ORTHO05D010086 2.0e-06 56.6 50 60.0
GSVIVG01023280001 Vitis vinifera HOM05D007992 ORTHO05D010086 2.0e-06 56.6 29 86.2
MELO3C031671.2 Cucumis melo HOM05D007992 ORTHO05D010086 2.6e-06 56.2 29 86.2
Gohir.A04G130200 Gossypium hirsutum HOM05D007992 ORTHO05D010086 2.6e-06 56.2 29 82.8
Atru.chr6.758 Acer truncatum HOM05D007992 ORTHO05D010086 3.3e-06 55.8 29 82.8
Gohir.D04G175400 Gossypium hirsutum HOM05D007992 ORTHO05D010086 3.3e-06 55.8 29 82.8
Gorai.012G166700 Gossypium raimondii HOM05D007992 ORTHO05D010086 3.3e-06 55.8 29 82.8
Nitab4.5_0000948g0130 Nicotiana tabacum HOM05D007992 ORTHO05D010086 4.4e-06 55.5 29 86.2
Peaxi162Scf00011g00937 Petunia axillaris HOM05D007992 ORTHO05D010086 4.4e-06 55.5 29 86.2
SalBow7G0224 Salvia bowleyana HOM05D007992 ORTHO05D010086 4.4e-06 55.5 29 82.8
CiPaw.05G051500 Carya illinoinensis HOM05D007992 ORTHO05D010086 5.7e-06 55.1 29 79.3
Lsat_1_v5_gn_7_79260 Lactuca sativa HOM05D007992 ORTHO05D010086 5.7e-06 55.1 29 82.8
Lj4g0012187 Lotus japonicus HOM05D007992 ORTHO05D010086 5.7e-06 55.1 29 86.2
MD15G1432800 Malus domestica HOM05D007992 ORTHO05D010086 5.7e-06 55.1 27 88.9
AUR62023424 Chenopodium quinoa HOM05D007992 ORTHO05D010086 9.7e-06 54.3 28 85.7


User provided reference genes

Program Settings