Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 1.6e-143 512.7 251 100.0
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 6.2e-71 271.6 255 56.9
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 8.2e-71 271.2 256 54.7
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 2.1e-66 256.5 256 51.6
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 6.1e-66 255.0 255 52.5
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 3.0e-65 252.7 256 53.1
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 3.0e-65 252.7 255 53.7
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 3.3e-64 249.2 252 53.2
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 4.1e-62 242.3 242 52.5
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 6.9e-62 241.5 251 51.4
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 6.9e-62 241.5 250 52.0
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 1.3e-60 237.3 254 50.4
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 2.9e-60 236.1 247 51.8
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 8.5e-60 234.6 239 52.3
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 1.1e-59 234.2 253 51.4
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 1.9e-59 233.4 251 50.6
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 1.9e-59 233.4 249 53.8
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 2.5e-59 233.0 248 50.0
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 3.2e-59 232.6 246 50.8
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 5.5e-59 231.9 248 50.8
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 9.4e-59 231.1 254 52.0
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 2.7e-58 229.6 156 69.9
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 2.7e-58 229.6 235 51.5
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 7.9e-58 228.0 239 51.5
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 1.8e-57 226.9 239 52.3
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 2.3e-57 226.5 156 68.6
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 2.3e-57 226.5 156 69.9
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 3.0e-57 226.1 236 49.6
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 5.1e-57 225.3 239 51.5
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 5.1e-57 225.3 234 52.6
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 5.1e-57 225.3 244 52.5
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 1.1e-56 224.2 156 67.9
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 1.5e-56 223.8 247 49.8
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 1.5e-56 223.8 234 52.6
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 2.0e-56 223.4 242 50.0
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 5.7e-56 221.9 234 51.7
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 5.7e-56 221.9 172 63.4
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 5.7e-56 221.9 243 51.9
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 1.3e-55 220.7 156 66.0
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 2.8e-55 219.5 254 48.8
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 4.8e-55 218.8 159 69.8
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 8.2e-55 218.0 251 49.0
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 8.2e-55 218.0 230 50.4
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 1.4e-54 217.2 157 67.5
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 1.4e-54 217.2 159 70.4
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 2.4e-54 216.5 239 47.7
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 2.4e-54 216.5 156 66.0
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 3.1e-54 216.1 156 67.9
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 4.1e-54 215.7 248 48.0
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 5.3e-54 215.3 159 66.0
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 1.2e-53 214.2 243 50.6
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 2.0e-53 213.4 159 63.5
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 2.6e-53 213.0 156 64.1
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 2.6e-53 213.0 240 48.8
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 4.5e-53 212.2 239 48.5
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 4.5e-53 212.2 240 48.8
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 4.5e-53 212.2 240 48.8
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 4.5e-53 212.2 240 48.8
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 4.5e-53 212.2 239 48.1
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 4.5e-53 212.2 156 66.0
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 5.9e-53 211.8 238 47.9
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 1.0e-52 211.1 228 49.6
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 1.7e-52 210.3 182 58.8
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 2.2e-52 209.9 259 45.9
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 2.2e-52 209.9 272 46.0
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 2.9e-52 209.5 230 49.6
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 2.9e-52 209.5 240 49.2
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 2.9e-52 209.5 240 49.2
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 5.0e-52 208.8 240 49.2
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 8.5e-52 208.0 159 61.6
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 1.1e-51 207.6 239 49.0
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 1.1e-51 207.6 239 49.0
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 1.4e-51 207.2 240 47.9
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 1.9e-51 206.8 239 48.5
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 1.9e-51 206.8 239 48.5
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 4.2e-51 205.7 239 48.5
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 2.1e-50 203.4 185 53.5
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 4.7e-50 202.2 252 46.0
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 4.7e-50 202.2 240 48.3
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 6.1e-50 201.8 148 62.8
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 1.0e-49 201.1 156 64.7
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 2.3e-49 199.9 148 62.2
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 5.1e-49 198.7 181 55.2
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 1.1e-46 191.0 156 61.5
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 9.1e-46 188.0 143 67.1
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 1.2e-45 187.6 143 66.4
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 5.9e-45 185.3 153 60.1
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 2.5e-43 179.9 130 66.9
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 4.7e-42 175.6 204 47.1
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 8.0e-42 174.9 156 54.5
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 1.0e-41 174.5 132 64.4
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 9.7e-40 167.9 156 53.8
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.3e-39 167.5 156 53.2
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 1.7e-39 167.2 208 46.2
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 6.3e-39 165.2 155 54.2
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 1.4e-38 164.1 156 51.9
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 9.1e-38 161.4 185 49.2
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 2.0e-32 143.7 157 51.6
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 2.2e-31 140.2 128 56.2
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.4e-30 137.5 131 51.1
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 5.5e-27 125.6 79 77.2
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 5.5e-27 125.6 88 67.0
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 1.5e-24 117.5 141 48.9
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 8.3e-15 85.1 151 36.4
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 3.9e-12 76.3 47 74.5
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.5e-11 74.3 89 44.9
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 2.5e-11 73.6 65 56.9
PGSC0003DMG402001979 Solanum tuberosum HOM05D000011 ORTHO05D000018 2.8e-10 70.1 45 71.1
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 1.0e-09 68.2 49 67.3


User provided reference genes

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