Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold26G11386 Striga asiatica HOM05D007621 ORTHO05D009631 2.2e-114 415.6 210 100.0
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 2.0e-14 83.6 61 63.9
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 3.2e-12 76.3 60 58.3
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 5.1e-10 68.9 58 58.6
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 8.8e-10 68.2 61 57.4
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 1.1e-09 67.8 58 53.4
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 1.1e-09 67.8 58 56.9
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 5.7e-09 65.5 58 53.4
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 5.7e-09 65.5 61 52.5
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 5.7e-09 65.5 61 54.1
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 7.4e-09 65.1 61 54.1
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 9.7e-09 64.7 58 53.4
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 9.7e-09 64.7 66 51.5
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 1.3e-08 64.3 58 56.9
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 2.2e-08 63.5 58 53.4
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 2.8e-08 63.2 58 53.4
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 3.7e-08 62.8 61 50.8
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 6.3e-08 62.0 58 55.2
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 6.3e-08 62.0 58 51.7
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 6.3e-08 62.0 58 53.4
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 8.2e-08 61.6 58 55.2
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 8.2e-08 61.6 58 53.4
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 8.2e-08 61.6 58 53.4
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 8.2e-08 61.6 58 53.4
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 1.1e-07 61.2 58 50.0
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 1.1e-07 61.2 58 51.7
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 1.1e-07 61.2 61 49.2
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 1.4e-07 60.8 58 51.7
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 1.4e-07 60.8 58 53.4
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 1.8e-07 60.5 58 51.7
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 2.4e-07 60.1 58 51.7
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 2.4e-07 60.1 58 51.7
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 2.4e-07 60.1 58 53.4
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 3.1e-07 59.7 58 51.7
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 4.1e-07 59.3 58 50.0
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 5.3e-07 58.9 58 48.3
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 5.3e-07 58.9 58 50.0
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 7.0e-07 58.5 58 48.3
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 9.1e-07 58.2 58 46.6
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 9.1e-07 58.2 58 48.3
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 1.2e-06 57.8 58 50.0
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 1.2e-06 57.8 58 46.6
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 2.0e-06 57.0 58 48.3
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 2.6e-06 56.6 58 50.0
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 2.6e-06 56.6 61 44.3
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 2.6e-06 56.6 58 51.7
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 2.6e-06 56.6 56 46.4
SGA_v2.0_scaffold4G02417 Striga asiatica HOM05D004134 ORTHO05D023219 2.6e-06 56.6 37 78.4
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 3.5e-06 56.2 61 44.3
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 5.9e-06 55.5 57 45.6
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 7.7e-06 55.1 58 46.6
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 7.7e-06 55.1 58 46.6


User provided reference genes

Program Settings