Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold26G11350 Striga asiatica HOM05D003473 ORTHO05D003872 2.5e-158 562.0 270 100.0
SGA_v2.0_scaffold18G08388 Striga asiatica HOM05D003473 ORTHO05D003872 8.5e-74 281.2 171 80.1
SGA_v2.0_scaffold2G01010 Striga asiatica HOM05D003473 ORTHO05D003872 2.6e-67 259.6 278 54.0
SGA_v2.0_scaffold90G27648 Striga asiatica HOM05D003473 ORTHO05D003872 3.2e-65 252.7 129 90.7
MSTRG.8227 Avicennia marina HOM05D003473 ORTHO05D003872 7.4e-62 241.5 280 50.7
SalBow6G1341 Salvia bowleyana HOM05D003473 ORTHO05D003872 4.1e-60 235.7 302 47.4
Nitab4.5_0011129g0030 Nicotiana tabacum HOM05D003473 ORTHO05D003872 2.2e-58 229.9 280 47.1
TWI36G0550 Tripterygium wilfordii HOM05D003473 ORTHO05D003872 3.8e-58 229.2 281 47.3
Nitab4.5_0001913g0170 Nicotiana tabacum HOM05D003473 ORTHO05D003872 5.0e-58 228.8 280 46.8
Oeu014528.1 Olea europaea HOM05D003473 ORTHO05D003872 8.5e-58 228.0 281 48.8
Sed0013546 Sechium edule HOM05D003473 ORTHO05D003872 8.5e-58 228.0 284 46.1
Cpa.g.sc306.6 Carica papaya HOM05D003473 ORTHO05D003872 1.1e-57 227.6 283 47.0
GSVIVG01023451001 Vitis vinifera HOM05D003473 ORTHO05D003872 1.1e-57 227.6 281 45.9
Dinv15516 Davidia involucrata HOM05D003473 ORTHO05D003872 1.9e-57 226.9 283 46.6
Dinv25278 Davidia involucrata HOM05D003473 ORTHO05D003872 1.9e-57 226.9 283 46.6
MSTRG.314 Avicennia marina HOM05D003473 ORTHO05D003872 3.2e-57 226.1 282 47.2
Thecc.05G270100 Theobroma cacao HOM05D003473 ORTHO05D003872 4.2e-57 225.7 296 46.3
ClCG11G010530 Citrullus lanatus HOM05D003473 ORTHO05D003872 1.2e-56 224.2 284 46.1
Prupe.6G350700 Prunus persica HOM05D003473 ORTHO05D003872 1.2e-56 224.2 282 46.1
Cc02_g08740 Coffea canephora HOM05D003473 ORTHO05D003872 1.6e-56 223.8 300 45.0
Ciclev10019419m.g Citrus clementina HOM05D003473 ORTHO05D003872 2.7e-56 223.0 282 46.5
Migut.F01540 Erythranthe guttata HOM05D003473 ORTHO05D003872 2.7e-56 223.0 288 47.6
CsaV3_2G009860 Cucumis sativus L. HOM05D003473 ORTHO05D003872 4.7e-56 222.2 284 45.4
Hma1.2p1_1007F.1_g247110 Hydrangea macrophylla HOM05D003473 ORTHO05D003872 4.7e-56 222.2 281 46.6
Lj2C44G25 Lonicera japonica HOM05D003473 ORTHO05D003872 4.7e-56 222.2 282 47.9
Eucgr.B02153 Eucalyptus grandis HOM05D003473 ORTHO05D003872 6.1e-56 221.9 284 46.5
Peaxi162Scf00718g00014 Petunia axillaris HOM05D003473 ORTHO05D003872 6.1e-56 221.9 280 45.7
Duzib177G0657 Durio zibethinus HOM05D003473 ORTHO05D003872 1.0e-55 221.1 281 46.6
Manes.08G140000 Manihot esculenta HOM05D003473 ORTHO05D003872 2.3e-55 219.9 281 45.6
FvH4_6g01760 Fragaria vesca HOM05D003473 ORTHO05D003872 4.0e-55 219.2 281 45.2
FAN14G5108 Fragaria x ananassa HOM05D003473 ORTHO05D003872 5.2e-55 218.8 281 45.2
MD04G1231000 Malus domestica HOM05D003473 ORTHO05D003872 5.2e-55 218.8 282 44.3
QL03p029857 Quercus lobata HOM05D003473 ORTHO05D003872 5.2e-55 218.8 281 46.3
TWI56G1190 Tripterygium wilfordii HOM05D003473 ORTHO05D003872 1.2e-54 217.6 281 45.6
FAN05G2419 Fragaria x ananassa HOM05D003473 ORTHO05D003872 1.5e-54 217.2 282 45.7
Gorai.007G275200 Gossypium raimondii HOM05D003473 ORTHO05D003872 1.5e-54 217.2 281 46.6
MELO3C008699.2 Cucumis melo HOM05D003473 ORTHO05D003872 2.0e-54 216.9 284 44.4
Duzib128G0977 Durio zibethinus HOM05D003473 ORTHO05D003872 2.0e-54 216.9 280 45.7
Sc20g0000670 Simmondsia chinensis HOM05D003473 ORTHO05D003872 2.0e-54 216.9 284 45.4
MD12G1249300 Malus domestica HOM05D003473 ORTHO05D003872 2.6e-54 216.5 281 43.8
CANSAT54G3011 Cannabis sativa HOM05D003473 ORTHO05D003872 4.4e-54 215.7 283 43.1
FAN14G1733 Fragaria x ananassa HOM05D003473 ORTHO05D003872 4.4e-54 215.7 293 43.7
Gohir.D11G256800 Gossypium hirsutum HOM05D003473 ORTHO05D003872 4.4e-54 215.7 281 46.3
TPR.G6958 Trifolium pratense HOM05D003473 ORTHO05D003872 4.4e-54 215.7 284 42.6
FAN09G4673 Fragaria x ananassa HOM05D003473 ORTHO05D003872 5.7e-54 215.3 281 44.5
Nn1g02856 Nelumbo nucifera HOM05D003473 ORTHO05D003872 5.7e-54 215.3 281 44.8
Gohir.A11G246500 Gossypium hirsutum HOM05D003473 ORTHO05D003872 7.5e-54 214.9 281 44.8
Potri.019G019800 Populus trichocarpa HOM05D003473 ORTHO05D003872 7.5e-54 214.9 283 46.3
CiPaw.07G073400 Carya illinoinensis HOM05D003473 ORTHO05D003872 9.8e-54 214.5 282 45.0
Psat3g006840 Pisum sativum HOM05D003473 ORTHO05D003872 9.8e-54 214.5 288 42.0
Sopen06g012690 Solanum pennellii HOM05D003473 ORTHO05D003872 9.8e-54 214.5 269 45.7
PGSC0003DMG400028063 Solanum tuberosum HOM05D003473 ORTHO05D003872 9.8e-54 214.5 281 44.1
MBI07_g22622_MAGBIO Magnolia biondii HOM05D003473 ORTHO05D003872 1.3e-53 214.2 276 44.9
Aa31LG11G8510 Aethionema arabicum HOM05D003473 ORTHO05D003872 1.7e-53 213.8 278 42.8
Medtr7g115570 Medicago truncatula HOM05D003473 ORTHO05D003872 1.7e-53 213.8 284 42.3
BcaC04g23717 Brassica carinata HOM05D003473 ORTHO05D003872 2.2e-53 213.4 279 44.4
COL.COLO4_15495 Corchorus olitorius HOM05D003473 ORTHO05D003872 2.2e-53 213.4 211 53.6
TAR362G0719 Trochodendron aralioides HOM05D003473 ORTHO05D003872 2.2e-53 213.4 281 44.1
FAN05G0941 Fragaria x ananassa HOM05D003473 ORTHO05D003872 2.8e-53 213.0 282 45.4
RcHm_v2.0_Chr3g0449501 Rosa chinensis HOM05D003473 ORTHO05D003872 2.8e-53 213.0 282 45.0
C09p05430 Brassica napus HOM05D003473 ORTHO05D003872 6.3e-53 211.8 279 44.4
Potri.013G047600 Populus trichocarpa HOM05D003473 ORTHO05D003872 6.3e-53 211.8 284 45.8
Cfa006361 Carpinus fangiana HOM05D003473 ORTHO05D003872 8.3e-53 211.5 283 45.9
BraA06t26728Z Brassica rapa HOM05D003473 ORTHO05D003872 1.4e-52 210.7 277 43.7
Solyc06g036640.4 Solanum lycopersicum HOM05D003473 ORTHO05D003872 1.4e-52 210.7 269 45.4
Atru.chr2.998 Acer truncatum HOM05D003473 ORTHO05D003872 1.8e-52 210.3 224 49.6
Ca_09457_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 1.8e-52 210.3 283 42.4
HPP92_020845 Vanilla planifolia HOM05D003473 ORTHO05D003872 1.8e-52 210.3 284 42.6
BolC9t53472H Brassica oleracea HOM05D003473 ORTHO05D003872 2.4e-52 209.9 278 44.6
HanXRQChr14g0454231 Helianthus annuus HOM05D003473 ORTHO05D003872 2.4e-52 209.9 284 43.7
Lsat_1_v5_gn_2_108280 Lactuca sativa HOM05D003473 ORTHO05D003872 2.4e-52 209.9 224 50.0
Aqoxy2G03708 Aquilegia oxysepala HOM05D003473 ORTHO05D003872 3.1e-52 209.5 289 42.6
Sp2g19990 Schrenkiella parvula HOM05D003473 ORTHO05D003872 3.1e-52 209.5 308 41.2
BcaC06g30691 Brassica carinata HOM05D003473 ORTHO05D003872 4.1e-52 209.1 277 43.3
A06p38150 Brassica napus HOM05D003473 ORTHO05D003872 4.1e-52 209.1 277 43.7
A09p05020 Brassica napus HOM05D003473 ORTHO05D003872 5.4e-52 208.8 280 43.6
BraA09t36141Z Brassica rapa HOM05D003473 ORTHO05D003872 5.4e-52 208.8 278 44.2
Carub.0006s2613 Capsella rubella HOM05D003473 ORTHO05D003872 9.1e-52 208.0 277 44.8
CAN.G24.3 Capsicum annuum HOM05D003473 ORTHO05D003872 9.1e-52 208.0 281 44.5
DCAR_030978 Daucus carota HOM05D003473 ORTHO05D003872 9.1e-52 208.0 281 44.5
FAN02G1417 Fragaria x ananassa HOM05D003473 ORTHO05D003872 9.1e-52 208.0 263 44.9
CARHR185420 Cardamine hirsuta HOM05D003473 ORTHO05D003872 1.6e-51 207.2 292 42.1
PGR142G0316 Punica granatum HOM05D003473 ORTHO05D003872 2.7e-51 206.5 284 44.0
AT5G28910 Arabidopsis thaliana HOM05D003473 ORTHO05D003872 3.5e-51 206.1 278 44.6
EL10Ac4g08995 Beta vulgaris HOM05D003473 ORTHO05D003872 4.5e-51 205.7 230 48.7
ECA238G4809 Erigeron canadensis HOM05D003473 ORTHO05D003872 5.9e-51 205.3 224 49.6
Lalb_Chr06g0168251 Lupinus albus HOM05D003473 ORTHO05D003872 5.9e-51 205.3 284 42.6
AUR62004830 Chenopodium quinoa HOM05D003473 ORTHO05D003872 7.7e-51 204.9 286 43.0
Haze_04416 Corylus avellana HOM05D003473 ORTHO05D003872 7.7e-51 204.9 276 43.8
Glyma.03G250300 Glycine max HOM05D003473 ORTHO05D003872 7.7e-51 204.9 224 48.2
vmacro10372 Vaccinium macrocarpon HOM05D003473 ORTHO05D003872 1.7e-50 203.8 337 40.7
arahy.Tifrunner.gnm1.ann1.K8P0T6 Arachis hypogaea HOM05D003473 ORTHO05D003872 3.8e-50 202.6 305 40.3
TPR.G22327 Trifolium pratense HOM05D003473 ORTHO05D003872 5.0e-50 202.2 284 42.3
Hma1.2p1_1007F.1_g247120 Hydrangea macrophylla HOM05D003473 ORTHO05D003872 6.5e-50 201.8 280 44.3
BcaNung02116 Brassica carinata HOM05D003473 ORTHO05D003872 8.5e-50 201.4 279 43.0
C07p40060 Brassica napus HOM05D003473 ORTHO05D003872 8.5e-50 201.4 279 43.0
BolC7t44541H Brassica oleracea HOM05D003473 ORTHO05D003872 8.5e-50 201.4 279 43.0
Glyma.10G165600 Glycine max HOM05D003473 ORTHO05D003872 8.5e-50 201.4 285 41.8
Glyma.20G223600 Glycine max HOM05D003473 ORTHO05D003872 1.1e-49 201.1 284 41.9
Carub.0007s3766 Capsella rubella HOM05D003473 ORTHO05D003872 1.5e-49 200.7 278 43.5
AUR62040917 Chenopodium quinoa HOM05D003473 ORTHO05D003872 1.5e-49 200.7 230 47.0
Lj5g0017612 Lotus japonicus HOM05D003473 ORTHO05D003872 1.5e-49 200.7 226 49.1
AL6G40940 Arabidopsis lyrata HOM05D003473 ORTHO05D003872 2.5e-49 199.9 293 41.0
Lalb_Chr02g0149051 Lupinus albus HOM05D003473 ORTHO05D003872 2.5e-49 199.9 224 48.2
Ca_10021_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 3.2e-49 199.5 224 48.2
Ca_29585_v3 Cicer arietinum L. HOM05D003473 ORTHO05D003872 3.2e-49 199.5 224 48.2
arahy.Tifrunner.gnm1.ann1.F06EBP Arachis hypogaea HOM05D003473 ORTHO05D003872 5.5e-49 198.7 286 43.0
arahy.Tifrunner.gnm1.ann1.T51LW4 Arachis hypogaea HOM05D003473 ORTHO05D003872 7.2e-49 198.4 286 43.0
CSS0019381 Camellia sinensis var. sinensis HOM05D003473 ORTHO05D003872 7.2e-49 198.4 285 43.2
Thhalv10003947m.g Eutrema salsugineum HOM05D003473 ORTHO05D003872 9.4e-49 198.0 285 41.8
Os02g0809500 Oryza sativa ssp. japonica HOM05D003473 ORTHO05D003872 1.2e-48 197.6 223 48.4
ATR0736G092 Amborella trichopoda HOM05D003473 ORTHO05D003872 4.7e-48 195.7 281 41.6
Medtr1g080320 Medicago truncatula HOM05D003473 ORTHO05D003872 6.1e-48 195.3 283 40.3
Aa31LG5G14900 Aethionema arabicum HOM05D003473 ORTHO05D003872 1.4e-47 194.1 276 41.7
THA.LOC104820771 Tarenaya hassleriana HOM05D003473 ORTHO05D003872 1.8e-47 193.7 224 46.4
PSO017G4386 Papaver somniferum HOM05D003473 ORTHO05D003872 2.3e-47 193.4 281 41.3
AT5G28960 Arabidopsis thaliana HOM05D003473 ORTHO05D003872 3.0e-47 193.0 294 39.8
VMungo0720G0613 Vigna mungo HOM05D003473 ORTHO05D003872 4.0e-47 192.6 284 40.5
CDE08G1169 Ceratophyllum demersum HOM05D003473 ORTHO05D003872 2.6e-46 189.9 272 42.3
Phvul.L001660 Phaseolus vulgaris HOM05D003473 ORTHO05D003872 3.4e-46 189.5 284 40.5
BcaB04g19636 Brassica carinata HOM05D003473 ORTHO05D003872 9.8e-46 188.0 309 38.8
Sabra13G0043500 Salix brachista HOM05D003473 ORTHO05D003872 9.8e-46 188.0 200 52.5
SGA_v2.0_scaffold158G37446 Striga asiatica HOM05D003473 ORTHO05D003872 2.2e-45 186.8 244 47.1
DCAR_030022 Daucus carota HOM05D003473 ORTHO05D003872 2.8e-45 186.4 327 37.9
PSO063G4417 Papaver somniferum HOM05D003473 ORTHO05D003872 2.8e-45 186.4 281 40.6
Carub.0006s2614 Capsella rubella HOM05D003473 ORTHO05D003872 5.4e-44 182.2 280 39.6
Eucgr.B02425 Eucalyptus grandis HOM05D003473 ORTHO05D003872 1.6e-43 180.6 219 48.4
Eucgr.B02152 Eucalyptus grandis HOM05D003473 ORTHO05D003872 2.0e-43 180.3 252 42.9
Lj3g0009325 Lotus japonicus HOM05D003473 ORTHO05D003872 1.0e-39 167.9 263 39.9
Oeu014529.1 Olea europaea HOM05D003473 ORTHO05D003872 3.4e-38 162.9 181 51.4
Carub.0006s2615 Capsella rubella HOM05D003473 ORTHO05D003872 2.9e-37 159.8 269 39.0
SMO351G0042 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 7.3e-33 145.2 292 32.9
Psat6g143640 Pisum sativum HOM05D003473 ORTHO05D003872 8.0e-32 141.7 176 44.9
SMO351G0391 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.8e-31 140.6 279 32.3
AagrBONN_evm.TU.Sc2ySwM_344.2742 Anthoceros agrestis HOM05D003473 ORTHO05D003872 1.2e-30 137.9 282 31.9
AagrBONN_evm.TU.Sc2ySwM_344.2023 Anthoceros agrestis HOM05D003473 ORTHO05D003872 2.0e-30 137.1 235 36.6
AagrBONN_evm.TU.Sc2ySwM_228.1748 Anthoceros agrestis HOM05D003473 ORTHO05D003872 2.6e-30 136.7 230 35.2
AagrBONN_evm.TU.Sc2ySwM_228.1715 Anthoceros agrestis HOM05D003473 ORTHO05D003872 4.4e-30 136.0 284 33.5
SMO116G0126 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 6.4e-29 132.1 286 32.2
RhsimUnG0083500 Rhododendron simsii HOM05D003473 ORTHO05D003872 3.5e-27 126.3 146 45.9
AagrBONN_evm.TU.Sc2ySwM_228.1714 Anthoceros agrestis HOM05D003473 ORTHO05D003872 7.8e-27 125.2 226 37.2
Sabra19G0032100 Salix brachista HOM05D003473 ORTHO05D003872 1.0e-26 124.8 265 33.6
SMO232G0128 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 3.0e-26 123.2 231 33.3
Rhsim09G0135600 Rhododendron simsii HOM05D003473 ORTHO05D003872 3.9e-26 122.9 139 46.8
SMO232G0001 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 6.6e-26 122.1 284 29.2
Rhsim09G0135200 Rhododendron simsii HOM05D003473 ORTHO05D003872 8.6e-26 121.7 139 46.0
Carub.0048s0001 Capsella rubella HOM05D003473 ORTHO05D003872 1.1e-25 121.3 174 42.5
SMO241G0019 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 2.5e-25 120.2 289 29.8
SMO232G0037 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 4.3e-25 119.4 211 32.7
SMO347G0181 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 7.3e-25 118.6 264 32.6
SMO241G0014 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 9.5e-25 118.2 231 30.3
Rhsim09G0136100 Rhododendron simsii HOM05D003473 ORTHO05D003872 1.2e-24 117.9 141 46.8
unitig_749.g14016 Utricularia gibba HOM05D003473 ORTHO05D003872 3.6e-24 116.3 135 49.6
Actinidia38935 Actinidia chinensis HOM05D003473 ORTHO05D003872 8.1e-24 115.2 140 46.4
SMO241G0001 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 1.4e-23 114.4 230 30.9
MBI07_g31076_MAGBIO Magnolia biondii HOM05D003473 ORTHO05D003872 1.8e-23 114.0 113 52.2
unitig_749.g14017 Utricularia gibba HOM05D003473 ORTHO05D003872 4.0e-23 112.8 131 47.3
Rhsim09G0136000 Rhododendron simsii HOM05D003473 ORTHO05D003872 5.2e-23 112.5 141 45.4
Rhsim09G0136500 Rhododendron simsii HOM05D003473 ORTHO05D003872 8.9e-23 111.7 141 44.7
Rhsim09G0136400 Rhododendron simsii HOM05D003473 ORTHO05D003872 1.5e-22 110.9 154 44.2
SMO145G0097 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 9.8e-22 108.2 227 30.4
SMO235G0055 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 4.1e-20 102.8 158 41.1
SEGI_25367 Sequoiadendron giganteum HOM05D003473 ORTHO05D003872 7.1e-20 102.1 138 42.0
GSVIVG01023448001 Vitis vinifera HOM05D003473 ORTHO05D003872 2.1e-19 100.5 61 73.8
Actinidia38934 Actinidia chinensis HOM05D003473 ORTHO05D003872 1.0e-18 98.2 55 80.0
CBR_g57532 Chara braunii HOM05D003473 ORTHO05D003872 4.3e-17 92.8 176 34.1
SMO232G0114 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 9.5e-17 91.7 173 30.1
CBR_g34948 Chara braunii HOM05D003473 ORTHO05D003872 6.2e-16 89.0 281 26.0
SMO232G0138 Selaginella moellendorffii HOM05D003473 ORTHO05D003872 8.1e-16 88.6 289 26.3
MBI07_g26633_MAGBIO Magnolia biondii HOM05D003473 ORTHO05D003872 1.3e-13 81.3 164 35.4
BcaNung02115 Brassica carinata HOM05D003473 ORTHO05D003872 1.9e-12 77.4 111 37.8
C07p40070 Brassica napus HOM05D003473 ORTHO05D003872 1.9e-12 77.4 111 37.8
BolC7t44543H Brassica oleracea HOM05D003473 ORTHO05D003872 1.9e-12 77.4 111 37.8
RhsimUnG0155700 Rhododendron simsii HOM05D003473 ORTHO05D003872 1.6e-11 74.3 68 51.5
CBR_g1013 Chara braunii HOM05D003473 ORTHO05D003872 7.8e-11 72.0 322 24.2
CBR_g40386 Chara braunii HOM05D003473 ORTHO05D003872 1.3e-10 71.2 272 24.3
DCAR_030014 Daucus carota HOM05D003473 ORTHO05D003872 7.3e-09 65.5 51 66.7
SEGI_32914 Sequoiadendron giganteum HOM05D003473 ORTHO05D003872 2.1e-08 63.9 109 34.9
CBR_g48364 Chara braunii HOM05D003473 ORTHO05D003872 2.4e-07 60.5 274 24.8
Rhsim09G0136200 Rhododendron simsii HOM05D003473 ORTHO05D003872 6.8e-07 58.9 56 51.8


User provided reference genes

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