Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold26G11326 Striga asiatica HOM05D002011 ORTHO05D001948 5.1e-64 247.7 133 100.0
Migut.D01093 Erythranthe guttata HOM05D002011 ORTHO05D001948 4.8e-22 108.2 121 51.2
MSTRG.9415 Avicennia marina HOM05D002011 ORTHO05D001948 2.9e-19 99.0 134 45.5
MSTRG.22780 Avicennia marina HOM05D002011 ORTHO05D001948 1.2e-17 93.6 127 42.5
Migut.I00725 Erythranthe guttata HOM05D002011 ORTHO05D001948 1.8e-16 89.7 124 42.7
SGA_v2.0_scaffold37G14736 Striga asiatica HOM05D002011 ORTHO05D001948 3.0e-16 89.0 117 43.6
SalBow7G0591 Salvia bowleyana HOM05D002011 ORTHO05D001948 4.0e-16 88.6 136 40.4
SGA_v2.0_scaffold5G02744 Striga asiatica HOM05D002011 ORTHO05D001948 5.2e-16 88.2 131 45.8
Cc04_g04820 Coffea canephora HOM05D002011 ORTHO05D001948 2.0e-15 86.3 147 41.5
Actinidia08950 Actinidia chinensis HOM05D002011 ORTHO05D001948 1.1e-13 80.5 130 40.8
SalBow6G4661 Salvia bowleyana HOM05D002011 ORTHO05D001948 2.4e-13 79.3 64 65.6
unitig_0.g358 Utricularia gibba HOM05D002011 ORTHO05D001948 4.1e-13 78.6 118 39.8
Hma1.2p1_0228F.1_g096600 Hydrangea macrophylla HOM05D002011 ORTHO05D001948 9.2e-13 77.4 132 40.2
Sc23g0006520 Simmondsia chinensis HOM05D002011 ORTHO05D001948 1.2e-12 77.0 122 41.0
CiPaw.01G252000 Carya illinoinensis HOM05D002011 ORTHO05D001948 1.6e-12 76.6 156 36.5
Ciclev10026302m.g Citrus clementina HOM05D002011 ORTHO05D001948 1.6e-12 76.6 134 40.3
TPR.G8906 Trifolium pratense HOM05D002011 ORTHO05D001948 1.6e-12 76.6 144 38.9
Dinv23313 Davidia involucrata HOM05D002011 ORTHO05D001948 2.0e-12 76.3 67 61.2
Nn8g39727 Nelumbo nucifera HOM05D002011 ORTHO05D001948 2.0e-12 76.3 145 39.3
Oeu027834.1 Olea europaea HOM05D002011 ORTHO05D001948 2.0e-12 76.3 139 40.3
MSTRG.11167 Avicennia marina HOM05D002011 ORTHO05D001948 4.5e-12 75.1 145 38.6
CiPaw.02G160500 Carya illinoinensis HOM05D002011 ORTHO05D001948 2.9e-11 72.4 105 41.9
Oeu010089.1 Olea europaea HOM05D002011 ORTHO05D001948 2.9e-11 72.4 149 34.9
QL05p034085 Quercus lobata HOM05D002011 ORTHO05D001948 2.9e-11 72.4 154 33.8
Lj5C77G14 Lonicera japonica HOM05D002011 ORTHO05D001948 3.9e-11 72.0 131 42.0
MD09G1223300 Malus domestica HOM05D002011 ORTHO05D001948 3.9e-11 72.0 65 61.5
CiPaw.08G008100 Carya illinoinensis HOM05D002011 ORTHO05D001948 5.0e-11 71.6 141 36.2
Sabra17G0040900 Salix brachista HOM05D002011 ORTHO05D001948 5.0e-11 71.6 127 38.6
ClCG05G016560 Citrullus lanatus HOM05D002011 ORTHO05D001948 6.6e-11 71.2 127 37.0
Sabra17G0045900 Salix brachista HOM05D002011 ORTHO05D001948 8.6e-11 70.9 127 38.6
Ah.16g104840 Amaranthus hybridus HOM05D002011 ORTHO05D001948 1.1e-10 70.5 118 39.0
MD17G1219700 Malus domestica HOM05D002011 ORTHO05D001948 1.1e-10 70.5 79 50.6
Nitab4.5_0005934g0050 Nicotiana tabacum HOM05D002011 ORTHO05D001948 1.5e-10 70.1 109 39.4
PGSC0003DMG400014198 Solanum tuberosum HOM05D002011 ORTHO05D001948 1.5e-10 70.1 138 37.0
TPR.G19169 Trifolium pratense HOM05D002011 ORTHO05D001948 1.5e-10 70.1 125 36.8
vmacro19034 Vaccinium macrocarpon HOM05D002011 ORTHO05D001948 1.9e-10 69.7 144 34.0
VMungo1080G1625 Vigna mungo HOM05D002011 ORTHO05D001948 1.9e-10 69.7 69 52.2
ECA247G3935 Erigeron canadensis HOM05D002011 ORTHO05D001948 2.5e-10 69.3 71 52.1
HanXRQChr04g0098231 Helianthus annuus HOM05D002011 ORTHO05D001948 3.3e-10 68.9 109 40.4
Lalb_Chr24g0395351 Lupinus albus HOM05D002011 ORTHO05D001948 3.3e-10 68.9 113 38.1
COL.COLO4_18921 Corchorus olitorius HOM05D002011 ORTHO05D001948 4.3e-10 68.6 126 36.5
EL10Ac2g04150 Beta vulgaris HOM05D002011 ORTHO05D001948 5.6e-10 68.2 128 33.6
Eucgr.F03942 Eucalyptus grandis HOM05D002011 ORTHO05D001948 5.6e-10 68.2 123 39.0
Manes.16G126300 Manihot esculenta HOM05D002011 ORTHO05D001948 5.6e-10 68.2 105 38.1
Prupe.3G095200 Prunus persica HOM05D002011 ORTHO05D001948 5.6e-10 68.2 61 62.3
PGR102G1217 Punica granatum HOM05D002011 ORTHO05D001948 5.6e-10 68.2 122 41.0
Solyc03g117210.4 Solanum lycopersicum HOM05D002011 ORTHO05D001948 5.6e-10 68.2 69 53.6
Sopen03g036120 Solanum pennellii HOM05D002011 ORTHO05D001948 5.6e-10 68.2 69 53.6
Potri.017G053900 Populus trichocarpa HOM05D002011 ORTHO05D001948 7.3e-10 67.8 127 36.2
Sed0008145 Sechium edule HOM05D002011 ORTHO05D001948 7.3e-10 67.8 145 37.2
Peaxi162Scf00332g00224 Petunia axillaris HOM05D002011 ORTHO05D001948 9.5e-10 67.4 138 37.0
Phvul.005G181100 Phaseolus vulgaris HOM05D002011 ORTHO05D001948 9.5e-10 67.4 69 50.7
Hund03478 Selenicereus undatus HOM05D002011 ORTHO05D001948 9.5e-10 67.4 69 52.2
Actinidia23086 Actinidia chinensis HOM05D002011 ORTHO05D001948 1.2e-09 67.0 129 38.0
Cpa.g.sc10.124 Carica papaya HOM05D002011 ORTHO05D001948 1.6e-09 66.6 73 52.1
HanXRQChr02g0034871 Helianthus annuus HOM05D002011 ORTHO05D001948 2.1e-09 66.2 119 37.0
AUR62031573 Chenopodium quinoa HOM05D002011 ORTHO05D001948 2.8e-09 65.9 121 33.9
Cfa013098 Carpinus fangiana HOM05D002011 ORTHO05D001948 3.6e-09 65.5 137 35.0
CiPaw.07G227200 Carya illinoinensis HOM05D002011 ORTHO05D001948 3.6e-09 65.5 139 33.8
Lalb_Chr22g0350711 Lupinus albus HOM05D002011 ORTHO05D001948 3.6e-09 65.5 107 39.3
RcHm_v2.0_Chr2g0133521 Rosa chinensis HOM05D002011 ORTHO05D001948 3.6e-09 65.5 54 64.8
Actinidia13206 Actinidia chinensis HOM05D002011 ORTHO05D001948 4.7e-09 65.1 123 38.2
AUR62012450 Chenopodium quinoa HOM05D002011 ORTHO05D001948 4.7e-09 65.1 124 33.9
Psat5g304320 Pisum sativum HOM05D002011 ORTHO05D001948 4.7e-09 65.1 103 42.7
CSS0035080 Camellia sinensis var. sinensis HOM05D002011 ORTHO05D001948 6.1e-09 64.7 128 35.2
Haze_21454 Corylus avellana HOM05D002011 ORTHO05D001948 6.1e-09 64.7 144 34.7
Nn2g12257 Nelumbo nucifera HOM05D002011 ORTHO05D001948 6.1e-09 64.7 130 40.8
QL02p020109 Quercus lobata HOM05D002011 ORTHO05D001948 6.1e-09 64.7 121 33.9
Sc09g0010370 Simmondsia chinensis HOM05D002011 ORTHO05D001948 6.1e-09 64.7 121 34.7
Actinidia14104 Actinidia chinensis HOM05D002011 ORTHO05D001948 8.0e-09 64.3 128 37.5
Lj3g0008755 Lotus japonicus HOM05D002011 ORTHO05D001948 8.0e-09 64.3 69 47.8
Medtr4g009195 Medicago truncatula HOM05D002011 ORTHO05D001948 8.0e-09 64.3 134 32.8
Cpa.g.sc127.1 Carica papaya HOM05D002011 ORTHO05D001948 1.0e-08 63.9 130 34.6
THA.LOC104803640 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 1.0e-08 63.9 116 34.5
GSVIVG01035917001 Vitis vinifera HOM05D002011 ORTHO05D001948 1.0e-08 63.9 100 40.0
Actinidia22311 Actinidia chinensis HOM05D002011 ORTHO05D001948 1.4e-08 63.5 119 37.0
Glyma.15G004800 Glycine max HOM05D002011 ORTHO05D001948 1.4e-08 63.5 142 33.1
CARHR239930 Cardamine hirsuta HOM05D002011 ORTHO05D001948 1.8e-08 63.2 115 38.3
FvH4_6g29000 Fragaria vesca HOM05D002011 ORTHO05D001948 1.8e-08 63.2 54 61.1
PSO017G2943 Papaver somniferum HOM05D002011 ORTHO05D001948 1.8e-08 63.2 101 40.6
PSO170G6599 Papaver somniferum HOM05D002011 ORTHO05D001948 1.8e-08 63.2 101 40.6
Atru.chr10.2381 Acer truncatum HOM05D002011 ORTHO05D001948 2.3e-08 62.8 127 37.8
Prupe.1G486600 Prunus persica HOM05D002011 ORTHO05D001948 2.3e-08 62.8 73 46.6
Hund29456 Selenicereus undatus HOM05D002011 ORTHO05D001948 2.3e-08 62.8 66 53.0
Hund29458 Selenicereus undatus HOM05D002011 ORTHO05D001948 2.3e-08 62.8 66 53.0
CSS0010574 Camellia sinensis var. sinensis HOM05D002011 ORTHO05D001948 3.1e-08 62.4 150 32.7
FAN09G3914 Fragaria x ananassa HOM05D002011 ORTHO05D001948 4.0e-08 62.0 54 59.3
MD15G1131300 Malus domestica HOM05D002011 ORTHO05D001948 4.0e-08 62.0 105 40.0
CAN.G407.39 Capsicum annuum HOM05D002011 ORTHO05D001948 5.2e-08 61.6 116 39.7
TWI63G1833 Tripterygium wilfordii HOM05D002011 ORTHO05D001948 5.2e-08 61.6 54 59.3
Cfa001910 Carpinus fangiana HOM05D002011 ORTHO05D001948 6.8e-08 61.2 83 44.6
FAN05G1371 Fragaria x ananassa HOM05D002011 ORTHO05D001948 6.8e-08 61.2 54 59.3
FAN05G4451 Fragaria x ananassa HOM05D002011 ORTHO05D001948 6.8e-08 61.2 54 59.3
AT4G32030 Arabidopsis thaliana HOM05D002011 ORTHO05D001948 8.9e-08 60.8 109 34.9
FAN02G4077 Fragaria x ananassa HOM05D002011 ORTHO05D001948 8.9e-08 60.8 53 60.4
Glyma.06G065100 Glycine max HOM05D002011 ORTHO05D001948 8.9e-08 60.8 141 34.0
Hund19962 Selenicereus undatus HOM05D002011 ORTHO05D001948 8.9e-08 60.8 128 32.0
THA.LOC104813311 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 8.9e-08 60.8 104 38.5
VMungo1309G3164 Vigna mungo HOM05D002011 ORTHO05D001948 8.9e-08 60.8 68 48.5
CANSAT56G3958 Cannabis sativa HOM05D002011 ORTHO05D001948 1.2e-07 60.5 65 47.7
FAN14G4768 Fragaria x ananassa HOM05D002011 ORTHO05D001948 1.5e-07 60.1 54 59.3
vmacro11223 Vaccinium macrocarpon HOM05D002011 ORTHO05D001948 1.5e-07 60.1 124 35.5
Glyma.04G063900 Glycine max HOM05D002011 ORTHO05D001948 2.0e-07 59.7 143 33.6
MD08G1154000 Malus domestica HOM05D002011 ORTHO05D001948 2.0e-07 59.7 105 38.1
Potri.006G259700 Populus trichocarpa HOM05D002011 ORTHO05D001948 2.0e-07 59.7 123 33.3
Sp5g35160 Schrenkiella parvula HOM05D002011 ORTHO05D001948 2.0e-07 59.7 110 37.3
TAR636G1642 Trochodendron aralioides HOM05D002011 ORTHO05D001948 2.0e-07 59.7 99 36.4
unitig_60.g25613 Utricularia gibba HOM05D002011 ORTHO05D001948 2.6e-07 59.3 119 34.5
AL7G19860 Arabidopsis lyrata HOM05D002011 ORTHO05D001948 3.4e-07 58.9 108 34.3
HanXRQChr09g0274671 Helianthus annuus HOM05D002011 ORTHO05D001948 3.4e-07 58.9 117 35.9
Sabra06G0202900 Salix brachista HOM05D002011 ORTHO05D001948 3.4e-07 58.9 120 34.2
TWI32G0803 Tripterygium wilfordii HOM05D002011 ORTHO05D001948 3.4e-07 58.9 54 59.3
BcaC03g15943 Brassica carinata HOM05D002011 ORTHO05D001948 4.4e-07 58.5 110 38.2
A07p45090 Brassica napus HOM05D002011 ORTHO05D001948 4.4e-07 58.5 110 37.3
Ca_25896_v3 Cicer arietinum L. HOM05D002011 ORTHO05D001948 4.4e-07 58.5 145 30.3
Ca_29512_v3 Cicer arietinum L. HOM05D002011 ORTHO05D001948 4.4e-07 58.5 145 30.3
BolC2t09720H Brassica oleracea HOM05D002011 ORTHO05D001948 5.8e-07 58.2 110 38.2
BraA07t32012Z Brassica rapa HOM05D002011 ORTHO05D001948 5.8e-07 58.2 110 37.3
MELO3C016985.2 Cucumis melo HOM05D002011 ORTHO05D001948 5.8e-07 58.2 58 53.4
CsaV3_4G036820 Cucumis sativus L. HOM05D002011 ORTHO05D001948 5.8e-07 58.2 58 53.4
MBI14_g15651_MAGBIO Magnolia biondii HOM05D002011 ORTHO05D001948 5.8e-07 58.2 132 30.3
Rhsim02G0206600 Rhododendron simsii HOM05D002011 ORTHO05D001948 5.8e-07 58.2 126 33.3
Actinidia18229 Actinidia chinensis HOM05D002011 ORTHO05D001948 7.5e-07 57.8 65 55.4
Thhalv10008783m.g Eutrema salsugineum HOM05D002011 ORTHO05D001948 7.5e-07 57.8 55 58.2
THA.LOC104813579 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 7.5e-07 57.8 110 33.6
vmacro16866 Vaccinium macrocarpon HOM05D002011 ORTHO05D001948 7.5e-07 57.8 90 41.1
Aqoxy7G03522 Aquilegia oxysepala HOM05D002011 ORTHO05D001948 9.8e-07 57.4 136 33.8
C02p37050 Brassica napus HOM05D002011 ORTHO05D001948 9.8e-07 57.4 106 38.7
CSS0039956 Camellia sinensis var. sinensis HOM05D002011 ORTHO05D001948 9.8e-07 57.4 135 33.3
Ciclev10009242m.g Citrus clementina HOM05D002011 ORTHO05D001948 9.8e-07 57.4 120 35.0
PSO063G4963 Papaver somniferum HOM05D002011 ORTHO05D001948 9.8e-07 57.4 130 33.8
Sed0021865 Sechium edule HOM05D002011 ORTHO05D001948 9.8e-07 57.4 66 45.5
unitig_52.g17073 Utricularia gibba HOM05D002011 ORTHO05D001948 9.8e-07 57.4 118 34.7
AL2G40840 Arabidopsis lyrata HOM05D002011 ORTHO05D001948 1.3e-06 57.0 110 36.4
A02p23330 Brassica napus HOM05D002011 ORTHO05D001948 1.3e-06 57.0 110 38.2
BraA02t07327Z Brassica rapa HOM05D002011 ORTHO05D001948 1.3e-06 57.0 110 38.2
Dinv03417 Davidia involucrata HOM05D002011 ORTHO05D001948 1.3e-06 57.0 53 56.6
Potri.001G313900 Populus trichocarpa HOM05D002011 ORTHO05D001948 1.3e-06 57.0 122 36.1
Sed0005888 Sechium edule HOM05D002011 ORTHO05D001948 1.3e-06 57.0 135 32.6
AL1G27950 Arabidopsis lyrata HOM05D002011 ORTHO05D001948 1.7e-06 56.6 58 53.4
BcaC08g45329 Brassica carinata HOM05D002011 ORTHO05D001948 1.7e-06 56.6 110 36.4
C06p29390 Brassica napus HOM05D000930 ORTHO05D001948 1.7e-06 56.6 110 36.4
BolC6t38103H Brassica oleracea HOM05D000930 ORTHO05D001948 1.7e-06 56.6 110 36.4
Nitab4.5_0009186g0020 Nicotiana tabacum HOM05D002011 ORTHO05D001948 1.7e-06 56.6 78 43.6
TWI34G1253 Tripterygium wilfordii HOM05D002011 ORTHO05D001948 1.7e-06 56.6 48 62.5
FAN27G3054 Fragaria x ananassa HOM05D002011 ORTHO05D001948 2.2e-06 56.2 59 49.2
Atru.chr7.2505 Acer truncatum HOM05D002011 ORTHO05D001948 2.9e-06 55.8 127 37.0
A07p26760 Brassica napus HOM05D000930 ORTHO05D001948 2.9e-06 55.8 110 35.5
C07p59060 Brassica napus HOM05D002011 ORTHO05D001948 2.9e-06 55.8 108 33.3
CSS0040463 Camellia sinensis var. sinensis HOM05D002011 ORTHO05D001948 2.9e-06 55.8 72 43.1
Haze_16633 Corylus avellana HOM05D002011 ORTHO05D001948 2.9e-06 55.8 58 51.7
Lsat_1_v5_gn_1_31661 Lactuca sativa HOM05D002011 ORTHO05D001948 2.9e-06 55.8 47 66.0
THA.LOC104799044 Tarenaya hassleriana HOM05D002011 ORTHO05D001948 2.9e-06 55.8 115 34.8
A06p11870 Brassica napus HOM05D002011 ORTHO05D001948 3.7e-06 55.5 59 55.9
C05p14050 Brassica napus HOM05D002011 ORTHO05D001948 3.7e-06 55.5 59 57.6
BolC5t30136H Brassica oleracea HOM05D002011 ORTHO05D001948 3.7e-06 55.5 59 57.6
Thhalv10025671m.g Eutrema salsugineum HOM05D002011 ORTHO05D001948 3.7e-06 55.5 116 34.5
Manes.03G011400 Manihot esculenta HOM05D002011 ORTHO05D001948 3.7e-06 55.5 87 40.2
Sp1g14100 Schrenkiella parvula HOM05D002011 ORTHO05D001948 3.7e-06 55.5 58 51.7
TAR626G1639 Trochodendron aralioides HOM05D002011 ORTHO05D001948 3.7e-06 55.5 144 35.4
unitig_62.g23779 Utricularia gibba HOM05D002011 ORTHO05D001948 3.7e-06 55.5 112 34.8
C06p53920 Brassica napus HOM05D002011 ORTHO05D001948 4.9e-06 55.1 110 35.5
BolC7t46354H Brassica oleracea HOM05D002011 ORTHO05D001948 4.9e-06 55.1 108 33.3
BraA03t15165Z Brassica rapa HOM05D002011 ORTHO05D001948 4.9e-06 55.1 108 33.3
SHI11259 Sapria himalayana HOM05D002011 ORTHO05D001948 4.9e-06 55.1 118 35.6
arahy.Tifrunner.gnm1.ann1.ZE8HCZ Arachis hypogaea HOM05D002011 ORTHO05D001948 6.4e-06 54.7 111 35.1
A03p61210 Brassica napus HOM05D002011 ORTHO05D001948 6.4e-06 54.7 108 34.3
Phvul.009G090200 Phaseolus vulgaris HOM05D002011 ORTHO05D001948 6.4e-06 54.7 56 48.2
RcHm_v2.0_Chr6g0297181 Rosa chinensis HOM05D002011 ORTHO05D001948 6.4e-06 54.7 59 47.5
TAR383G0822 Trochodendron aralioides HOM05D002011 ORTHO05D001948 6.4e-06 54.7 97 38.1
GSVIVG01017543001 Vitis vinifera HOM05D002011 ORTHO05D001948 6.4e-06 54.7 101 36.6
BcaB02g07260 Brassica carinata HOM05D002011 ORTHO05D001948 8.3e-06 54.3 110 35.5
BcaC07g41480 Brassica carinata HOM05D002011 ORTHO05D001948 8.3e-06 54.3 59 47.5
A09p61180 Brassica napus HOM05D002011 ORTHO05D001948 8.3e-06 54.3 59 47.5
C08p44770 Brassica napus HOM05D002011 ORTHO05D001948 8.3e-06 54.3 59 47.5
BraA09t41492Z Brassica rapa HOM05D002011 ORTHO05D001948 8.3e-06 54.3 59 47.5
FAN20G1038 Fragaria x ananassa HOM05D002011 ORTHO05D001948 8.3e-06 54.3 59 47.5
FAN24G0280 Fragaria x ananassa HOM05D002011 ORTHO05D001948 8.3e-06 54.3 59 47.5
Lj1g0007627 Lotus japonicus HOM05D002011 ORTHO05D001948 8.3e-06 54.3 138 29.7
Medtr2g104770 Medicago truncatula HOM05D002011 ORTHO05D001948 8.3e-06 54.3 115 33.9
Medtr3g106340 Medicago truncatula HOM05D002011 ORTHO05D001948 8.3e-06 54.3 89 37.1
PGR044G0932 Punica granatum HOM05D002011 ORTHO05D001948 8.3e-06 54.3 72 41.7


User provided reference genes

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