Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 1.1e-277 959.5 533 100.0
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 3.9e-179 632.1 376 81.1
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 2.2e-174 616.3 374 79.4
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 1.9e-173 613.2 376 79.5
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 2.1e-172 609.8 376 77.4
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 7.8e-172 607.8 376 77.1
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 3.9e-171 605.5 374 77.3
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 3.9e-171 605.5 376 76.6
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 8.6e-171 604.4 374 78.6
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 8.6e-171 604.4 376 76.9
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 2.5e-170 602.8 376 77.1
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 3.3e-170 602.4 376 76.6
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 3.3e-170 602.4 376 76.6
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 2.1e-169 599.7 374 76.5
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 4.7e-169 598.6 374 77.5
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 4.7e-169 598.6 374 76.5
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 4.7e-169 598.6 374 77.3
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 6.2e-169 598.2 374 77.5
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 5.2e-168 595.1 374 76.7
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 1.2e-167 594.0 374 76.5
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 1.2e-167 594.0 376 76.6
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 1.2e-167 594.0 376 75.3
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 2.0e-167 593.2 374 77.5
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 2.0e-167 593.2 374 75.9
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 2.0e-167 593.2 374 75.7
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 3.4e-167 592.4 374 77.5
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 7.6e-167 591.3 376 75.8
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 7.6e-167 591.3 374 75.9
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 9.9e-167 590.9 376 75.5
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 1.3e-166 590.5 374 75.9
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 1.7e-166 590.1 376 76.3
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 1.7e-166 590.1 376 77.7
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 2.2e-166 589.7 376 75.5
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 3.8e-166 589.0 376 75.3
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 3.8e-166 589.0 376 76.6
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 3.8e-166 589.0 374 76.2
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 4.9e-166 588.6 376 76.6
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 4.9e-166 588.6 376 75.8
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 6.4e-166 588.2 374 75.9
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 8.4e-166 587.8 374 77.3
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 8.4e-166 587.8 374 75.4
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.1e-165 587.4 374 77.3
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 1.1e-165 587.4 376 74.2
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 1.9e-165 586.6 374 76.7
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 4.2e-165 585.5 380 74.7
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 4.2e-165 585.5 376 75.8
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 1.6e-164 583.6 377 74.8
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 4.6e-164 582.0 374 75.1
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 6.0e-164 581.6 374 74.6
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 1.7e-163 580.1 376 73.1
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 3.0e-163 579.3 377 74.5
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 5.1e-163 578.6 374 74.3
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 1.1e-162 577.4 374 74.3
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 2.5e-162 576.2 374 75.1
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 3.3e-162 575.9 376 72.3
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 5.6e-162 575.1 371 74.7
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 1.8e-160 570.1 405 71.1
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 2.4e-160 569.7 376 71.8
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 3.1e-160 569.3 376 73.4
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 1.2e-159 567.4 375 72.0
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 2.6e-159 566.2 374 72.2
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 9.9e-159 564.3 382 72.3
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 4.9e-158 562.0 374 72.2
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 6.4e-158 561.6 374 72.2
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 3.0e-155 552.7 393 71.0
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 3.3e-154 549.3 393 71.0
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 5.6e-154 548.5 375 70.9
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 7.3e-154 548.1 366 71.3
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 1.1e-152 544.3 375 72.0
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 1.4e-152 543.9 376 70.2
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 4.0e-152 542.3 374 70.1
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 4.0e-152 542.3 372 70.4
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 4.0e-152 542.3 374 70.9
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 6.9e-152 541.6 375 69.6
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 2.0e-151 540.0 376 68.9
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 5.8e-151 538.5 374 69.8
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 4.9e-150 535.4 374 69.8
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 6.4e-150 535.0 374 68.7
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 1.4e-149 533.9 374 69.3
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 1.9e-149 533.5 374 68.7
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 3.2e-149 532.7 374 69.3
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 3.5e-148 529.3 374 69.8
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 2.2e-142 510.0 374 66.0
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 3.0e-139 499.6 366 66.7
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 1.3e-137 494.2 313 77.6
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 9.0e-136 488.0 316 75.0
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 2.9e-134 483.0 297 79.8
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 1.4e-133 480.7 297 78.8
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 1.3e-131 474.2 266 82.7
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 6.7e-131 471.9 376 63.8
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 3.3e-130 469.5 377 60.5
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 4.1e-128 462.6 375 61.6
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 1.5e-127 460.7 379 60.2
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 2.6e-127 459.9 264 83.0
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 1.3e-121 441.0 320 68.4
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 2.2e-110 403.7 254 78.3
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 5.2e-107 392.5 297 63.0
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 8.8e-107 391.7 236 77.5
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 1.4e-104 384.4 221 78.7
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 3.8e-102 376.3 242 76.4
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 1.0e-75 288.5 180 72.8
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 3.9e-62 243.4 224 58.0
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 7.8e-47 192.6 110 79.1
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 4.3e-45 186.8 113 74.3
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 9.6e-45 185.7 112 75.0
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 3.4e-42 177.2 122 68.0
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 5.8e-42 176.4 110 73.6
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.3e-41 175.3 109 72.5
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.3e-41 175.3 109 72.5
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 9.3e-40 169.1 122 66.4
Rhsim09G0000100 Rhododendron simsii HOM05D006567 ORTHO05D009430 2.3e-30 137.9 86 80.2
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 1.4e-27 128.6 92 60.9
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 5.5e-16 90.1 69 60.9
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 1.8e-11 75.1 54 64.8
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 3.1e-11 74.3 54 63.0
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 3.1e-11 74.3 54 64.8
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 7.7e-10 69.7 54 61.1
Pp3s34_460 Physcomitrium patens HOM05D001684 ORTHO05D018939 1.7e-09 68.6 272 27.9
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 1.6e-07 62.0 210 29.0
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 4.6e-07 60.5 42 61.9
Ca_29050_v3 Cicer arietinum L. HOM05D006567 ORTHO05D018939 1.0e-06 59.3 215 26.5


User provided reference genes

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