Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold26G11300 Striga asiatica HOM05D007259 ORTHO05D009158 4.8e-96 354.4 165 100.0
Peaxi162Scf00207g00430 Petunia axillaris HOM05D007259 ORTHO05D009158 4.8e-80 301.2 163 82.2
MSTRG.4677 Avicennia marina HOM05D007259 ORTHO05D009158 6.3e-80 300.8 163 84.0
CSS0004525 Camellia sinensis var. sinensis HOM05D007259 ORTHO05D009158 9.1e-79 297.0 163 82.2
Actinidia36875 Actinidia chinensis HOM05D007259 ORTHO05D009158 2.7e-78 295.4 163 81.0
Sopen06g025720 Solanum pennellii HOM05D007259 ORTHO05D009158 4.5e-78 294.7 163 78.5
Oeu060130.1 Olea europaea HOM05D007259 ORTHO05D009158 8.5e-77 290.4 162 80.9
Solyc06g068470.3 Solanum lycopersicum HOM05D007259 ORTHO05D009158 1.9e-76 289.3 163 76.7
PGSC0003DMG400028490 Solanum tuberosum HOM05D007259 ORTHO05D009158 5.5e-76 287.7 163 76.1
CAN.G1932.2 Capsicum annuum HOM05D007259 ORTHO05D009158 9.4e-76 287.0 163 77.3
Rhsim08G0205600 Rhododendron simsii HOM05D007259 ORTHO05D009158 1.2e-75 286.6 163 78.5
Dinv21412 Davidia involucrata HOM05D007259 ORTHO05D009158 2.7e-75 285.4 163 76.1
HanXRQChr05g0153761 Helianthus annuus HOM05D007259 ORTHO05D009158 2.7e-75 285.4 163 76.7
Medtr4g007095 Medicago truncatula HOM05D007259 ORTHO05D009158 2.7e-75 285.4 163 78.5
Ah.01g006970 Amaranthus hybridus HOM05D007259 ORTHO05D009158 8.0e-75 283.9 162 79.6
Cc04_g05120 Coffea canephora HOM05D007259 ORTHO05D009158 8.0e-75 283.9 163 76.7
Migut.D01126 Erythranthe guttata HOM05D007259 ORTHO05D009158 1.0e-74 283.5 163 81.0
Lj5A81T88 Lonicera japonica HOM05D007259 ORTHO05D009158 2.3e-74 282.3 163 76.1
PSO170G4635 Papaver somniferum HOM05D007259 ORTHO05D009158 2.3e-74 282.3 164 77.4
Lsat_1_v5_gn_5_8261 Lactuca sativa HOM05D007259 ORTHO05D009158 5.2e-74 281.2 163 76.7
TPR.G23079 Trifolium pratense HOM05D007259 ORTHO05D009158 6.8e-74 280.8 163 77.3
Lj3g0012869 Lotus japonicus HOM05D007259 ORTHO05D009158 8.8e-74 280.4 163 77.3
PSO017G0751 Papaver somniferum HOM05D007259 ORTHO05D009158 1.2e-73 280.0 164 76.8
SalBow6G4962 Salvia bowleyana HOM05D007259 ORTHO05D009158 1.2e-73 280.0 163 76.7
Ciclev10026584m.g Citrus clementina HOM05D007259 ORTHO05D009158 1.5e-73 279.6 163 76.7
Hund00433 Selenicereus undatus HOM05D007259 ORTHO05D009158 1.5e-73 279.6 162 77.8
Medtr4g007090 Medicago truncatula HOM05D007259 ORTHO05D009158 2.6e-73 278.9 163 76.7
VMungo0331G0163 Vigna mungo HOM05D007259 ORTHO05D009158 3.4e-73 278.5 163 77.3
TWI75G0585 Tripterygium wilfordii HOM05D007259 ORTHO05D009158 1.3e-72 276.6 163 75.5
TPR.G23090 Trifolium pratense HOM05D007259 ORTHO05D009158 1.7e-72 276.2 163 77.3
Lalb_Chr01g0012071 Lupinus albus HOM05D007259 ORTHO05D009158 2.2e-72 275.8 163 76.7
Eucgr.F03958 Eucalyptus grandis HOM05D007259 ORTHO05D009158 2.8e-72 275.4 163 74.8
PGR102G1952 Punica granatum HOM05D007259 ORTHO05D009158 3.7e-72 275.0 163 74.2
Atru.chr10.2413 Acer truncatum HOM05D007259 ORTHO05D009158 8.3e-72 273.9 163 73.6
CANSAT56G1631 Cannabis sativa HOM05D007259 ORTHO05D009158 8.3e-72 273.9 163 75.5
GSVIVG01015956001 Vitis vinifera HOM05D007259 ORTHO05D009158 1.1e-71 273.5 163 74.8
Potri.001G044200 Populus trichocarpa HOM05D007259 ORTHO05D009158 1.4e-71 273.1 163 74.2
FvH4_6g28630 Fragaria vesca HOM05D007259 ORTHO05D009158 2.4e-71 272.3 163 75.5
FAN14G4954 Fragaria x ananassa HOM05D007259 ORTHO05D009158 2.4e-71 272.3 163 75.5
QL05p036089 Quercus lobata HOM05D007259 ORTHO05D009158 2.4e-71 272.3 163 77.3
Cfa001880 Carpinus fangiana HOM05D007259 ORTHO05D009158 3.1e-71 271.9 161 75.2
RcHm_v2.0_Chr2g0132951 Rosa chinensis HOM05D007259 ORTHO05D009158 3.1e-71 271.9 163 75.5
Sabra01G0030500 Salix brachista HOM05D007259 ORTHO05D009158 4.1e-71 271.6 161 75.2
EL10Ac9g22206 Beta vulgaris HOM05D007259 ORTHO05D009158 9.2e-71 270.4 164 75.0
Gohir.D06G118700 Gossypium hirsutum HOM05D007259 ORTHO05D009158 9.2e-71 270.4 163 74.2
Glyma.08G218900 Glycine max HOM05D007259 ORTHO05D009158 1.6e-70 269.6 166 74.7
Sc12g0008330 Simmondsia chinensis HOM05D007259 ORTHO05D009158 1.6e-70 269.6 161 73.3
Duzib235G0063 Durio zibethinus HOM05D007259 ORTHO05D009158 2.0e-70 269.2 157 77.1
BcaC03g15926 Brassica carinata HOM05D007259 ORTHO05D009158 2.7e-70 268.9 163 73.6
BolC2t09700H Brassica oleracea HOM05D007259 ORTHO05D009158 2.7e-70 268.9 163 73.6
Gorai.010G136500 Gossypium raimondii HOM05D007259 ORTHO05D009158 2.7e-70 268.9 162 74.1
Psat7g260280 Pisum sativum HOM05D007259 ORTHO05D009158 2.7e-70 268.9 158 78.5
FAN05G5272 Fragaria x ananassa HOM05D007259 ORTHO05D009158 3.5e-70 268.5 163 74.2
Gohir.A06G114200 Gossypium hirsutum HOM05D007259 ORTHO05D009158 4.5e-70 268.1 163 73.6
C02p36870 Brassica napus HOM05D007259 ORTHO05D009158 5.9e-70 267.7 163 73.0
Thhalv10019243m.g Eutrema salsugineum HOM05D007259 ORTHO05D009158 5.9e-70 267.7 161 75.2
Sp5g34900 Schrenkiella parvula HOM05D007259 ORTHO05D009158 5.9e-70 267.7 161 75.2
Carub.0002s2668 Capsella rubella HOM05D007259 ORTHO05D009158 7.7e-70 267.3 163 74.2
Manes.04G102300 Manihot esculenta HOM05D007259 ORTHO05D009158 1.3e-69 266.5 163 74.8
BcaB05g25221 Brassica carinata HOM05D007259 ORTHO05D009158 1.7e-69 266.2 163 73.0
A02p23100 Brassica napus HOM05D007259 ORTHO05D009158 2.3e-69 265.8 163 73.0
BraA02t07308Z Brassica rapa HOM05D007259 ORTHO05D009158 2.3e-69 265.8 163 73.0
AT1G80860 Arabidopsis thaliana HOM05D007259 ORTHO05D009158 1.1e-68 263.5 163 73.0
Nitab4.5_0008962g0030 Nicotiana tabacum HOM05D007259 ORTHO05D009158 1.1e-68 263.5 144 80.6
Aa31LG4G1140 Aethionema arabicum HOM05D007259 ORTHO05D009158 1.5e-68 263.1 163 72.4
ClCG10G012930 Citrullus lanatus HOM05D007259 ORTHO05D009158 2.5e-68 262.3 162 72.8
AL2G40530 Arabidopsis lyrata HOM05D007259 ORTHO05D009158 4.3e-68 261.5 163 74.8
Thecc.06G041800 Theobroma cacao HOM05D007259 ORTHO05D009158 4.3e-68 261.5 163 71.8
Phvul.010G161400 Phaseolus vulgaris HOM05D007259 ORTHO05D009158 7.3e-68 260.8 163 72.4
Prupe.3G098300 Prunus persica HOM05D007259 ORTHO05D009158 7.3e-68 260.8 162 74.1
CARHR073610 Cardamine hirsuta HOM05D007259 ORTHO05D009158 9.5e-68 260.4 163 74.8
FAN09G1653 Fragaria x ananassa HOM05D007259 ORTHO05D009158 9.5e-68 260.4 159 74.8
unitig_60.g25615 Utricularia gibba HOM05D007259 ORTHO05D009158 9.5e-68 260.4 199 60.8
THA.LOC104812409 Tarenaya hassleriana HOM05D007259 ORTHO05D009158 1.6e-67 259.6 163 73.0
CsaV3_3G032790 Cucumis sativus L. HOM05D007259 ORTHO05D009158 3.6e-67 258.5 162 71.6
Sed0006537 Sechium edule HOM05D007259 ORTHO05D009158 4.0e-66 255.0 162 69.8
CiPaw.01G254600 Carya illinoinensis HOM05D007259 ORTHO05D009158 4.4e-65 251.5 161 71.4
MBI15_g08512_MAGBIO Magnolia biondii HOM05D007259 ORTHO05D009158 4.4e-65 251.5 165 69.7
Nn8g39898 Nelumbo nucifera HOM05D007259 ORTHO05D009158 4.4e-65 251.5 163 69.3
Os02g0612100 Oryza sativa ssp. japonica HOM05D007259 ORTHO05D009158 5.6e-60 234.6 162 69.1
Zm00001eb184520 Zea mays HOM05D007259 ORTHO05D009158 9.5e-60 233.8 157 69.4
BcaB05g25224 Brassica carinata HOM05D007259 ORTHO05D009158 2.1e-59 232.6 163 68.7
ECA246G0776 Erigeron canadensis HOM05D007259 ORTHO05D009158 3.7e-56 221.9 124 82.3
Haze_16667 Corylus avellana HOM05D007259 ORTHO05D009158 7.0e-55 217.6 258 45.3
HPP92_010735 Vanilla planifolia HOM05D007259 ORTHO05D009158 3.0e-53 212.2 152 65.1
CDE12G0386 Ceratophyllum demersum HOM05D007259 ORTHO05D009158 8.6e-53 210.7 141 68.1
SEGI_39537 Sequoiadendron giganteum HOM05D007259 ORTHO05D009158 2.8e-51 205.7 156 60.9
Potri.003G182400 Populus trichocarpa HOM05D007259 ORTHO05D009158 6.8e-50 201.1 117 78.6
AagrBONN_evm.TU.Sc2ySwM_117.1157 Anthoceros agrestis HOM05D007259 ORTHO05D009158 5.8e-49 198.0 163 56.4
DCAR_021369 Daucus carota HOM05D007259 ORTHO05D009158 9.8e-49 197.2 107 82.2
SMO141G0127 Selaginella moellendorffii HOM05D007259 ORTHO05D009158 4.6e-46 188.3 155 58.7
Pp3c6_3720 Physcomitrium patens HOM05D007259 ORTHO05D009158 1.2e-41 173.7 159 52.8
Glyma.07G022900 Glycine max HOM05D007259 ORTHO05D009158 4.3e-36 155.2 84 83.3
Nitab4.5_0000886g0050 Nicotiana tabacum HOM05D007259 ORTHO05D009158 4.3e-36 155.2 91 72.5
vmacro19057 Vaccinium macrocarpon HOM05D007259 ORTHO05D009158 1.1e-34 150.6 82 81.7
Aqoxy2G00331 Aquilegia oxysepala HOM05D001307 ORTHO05D001158 7.6e-33 144.4 91 69.2
MD17G1223400 Malus domestica HOM05D007259 ORTHO05D009158 2.9e-32 142.5 80 81.2
ATR0739G058 Amborella trichopoda HOM05D007259 ORTHO05D009158 5.4e-31 138.3 84 76.2
MD17G1223600 Malus domestica HOM05D007259 ORTHO05D009158 3.0e-29 132.5 83 67.5
Lj5C80T7 Lonicera japonica HOM05D007259 ORTHO05D009158 1.1e-28 130.6 82 69.5
FAN02G2583 Fragaria x ananassa HOM05D007259 ORTHO05D009158 1.5e-28 130.2 82 67.1
Cpa.g.sc10.78 Carica papaya HOM05D007259 ORTHO05D009158 1.6e-27 126.7 82 65.9
HPP92_010738 Vanilla planifolia HOM05D007259 ORTHO05D009158 2.8e-27 125.9 94 66.0
MELO3C026739.2 Cucumis melo HOM05D007259 ORTHO05D009158 9.9e-25 117.5 82 61.0
SalBow8G2481 Salvia bowleyana HOM05D007259 ORTHO05D009158 1.3e-16 90.5 71 67.6
COL.COLO4_26703 Corchorus olitorius HOM05D007259 ORTHO05D009158 8.7e-13 77.8 43 83.7
PRCOL_00005528 Prasinoderma coloniale HOM05D007259 ORTHO05D009158 1.3e-08 63.9 72 48.6


User provided reference genes

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