Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold26G11248 Striga asiatica HOM05D004964 ORTHO05D005918 2.7e-160 568.5 278 100.0
SGA_v2.0_scaffold26G11247 Striga asiatica HOM05D004964 ORTHO05D005918 5.3e-71 271.9 207 71.5
SGA_v2.0_scaffold177G39428 Striga asiatica HOM05D004964 ORTHO05D005918 1.2e-70 270.8 207 70.0
SGA_v2.0_scaffold295G47511 Striga asiatica HOM05D004964 ORTHO05D005918 7.7e-54 214.9 207 58.9
Nitab4.5_0013387g0040 Nicotiana tabacum HOM05D004964 ORTHO05D005918 4.1e-39 166.0 168 54.2
Cpa.g.sc162.40 Carica papaya HOM05D004964 ORTHO05D005918 3.5e-38 162.9 209 44.5
Nitab4.5_0005396g0030 Nicotiana tabacum HOM05D004964 ORTHO05D005918 4.5e-38 162.5 157 54.8
Migut.F00800 Erythranthe guttata HOM05D004964 ORTHO05D005918 2.5e-36 156.8 220 45.0
Peaxi162Scf00407g00626 Petunia axillaris HOM05D004964 ORTHO05D005918 1.2e-35 154.5 204 46.1
CAN.G588.60 Capsicum annuum HOM05D004964 ORTHO05D005918 8.0e-35 151.8 202 44.1
MSTRG.14348 Avicennia marina HOM05D004964 ORTHO05D005918 2.3e-34 150.2 218 44.5
CSS0014360 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 6.8e-34 148.7 218 41.7
Manes.08G139500 Manihot esculenta HOM05D004964 ORTHO05D005918 2.0e-33 147.1 205 42.4
PGSC0003DMG401006195 Solanum tuberosum HOM05D004964 ORTHO05D005918 2.0e-33 147.1 202 45.0
Dinv18988 Davidia involucrata HOM05D004964 ORTHO05D005918 2.6e-33 146.7 220 42.3
Nn4g26424 Nelumbo nucifera HOM05D004964 ORTHO05D005918 3.4e-33 146.4 218 41.3
Rhsim09G0136900 Rhododendron simsii HOM05D004964 ORTHO05D005918 3.4e-33 146.4 219 42.0
MD04G1230400 Malus domestica HOM05D004964 ORTHO05D005918 7.5e-33 145.2 204 40.7
TAR362G0358 Trochodendron aralioides HOM05D004964 ORTHO05D005918 7.5e-33 145.2 181 46.4
vmacro10367 Vaccinium macrocarpon HOM05D004964 ORTHO05D005918 9.8e-33 144.8 220 42.3
Solyc01g111410.3 Solanum lycopersicum HOM05D004964 ORTHO05D005918 1.7e-32 144.1 202 44.6
Prupe.6G350300 Prunus persica HOM05D004964 ORTHO05D005918 4.8e-32 142.5 204 40.7
CSS0038343 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 6.3e-32 142.1 202 42.6
Sopen01g053470 Solanum pennellii HOM05D004964 ORTHO05D005918 1.1e-31 141.4 202 43.1
Oeu016533.1 Olea europaea HOM05D004964 ORTHO05D005918 1.8e-31 140.6 212 43.4
Potri.013G047100 Populus trichocarpa HOM05D004964 ORTHO05D005918 1.8e-31 140.6 202 41.6
Lj2A43G39 Lonicera japonica HOM05D004964 ORTHO05D005918 2.7e-30 136.7 207 41.5
QL03p029942 Quercus lobata HOM05D004964 ORTHO05D005918 7.7e-30 135.2 204 40.7
EL10Ac2g04577 Beta vulgaris HOM05D004964 ORTHO05D005918 1.0e-29 134.8 201 39.3
RcHm_v2.0_Chr3g0449661 Rosa chinensis HOM05D004964 ORTHO05D005918 1.0e-29 134.8 200 41.5
Hma1.2p1_1512F.1_g287895 Hydrangea macrophylla HOM05D004964 ORTHO05D005918 2.9e-29 133.3 173 45.1
VMungo0331G1958 Vigna mungo HOM05D004964 ORTHO05D005918 5.0e-29 132.5 251 34.7
Sabra13G0043100 Salix brachista HOM05D004964 ORTHO05D005918 6.6e-29 132.1 168 44.6
Sc10g0001190 Simmondsia chinensis HOM05D004964 ORTHO05D005918 5.5e-28 129.0 215 36.7
Aqoxy5G02134 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 2.8e-27 126.7 184 39.7
PSO210G0659 Papaver somniferum HOM05D004964 ORTHO05D005918 3.6e-27 126.3 207 38.2
FvH4_6g01921 Fragaria vesca HOM05D004964 ORTHO05D005918 8.0e-27 125.2 201 38.8
FAN09G0282 Fragaria x ananassa HOM05D004964 ORTHO05D005918 8.0e-27 125.2 201 38.8
FAN14G5822 Fragaria x ananassa HOM05D004964 ORTHO05D005918 8.0e-27 125.2 201 38.8
Aqoxy4G00649 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 1.4e-26 124.4 185 40.0
PSO210G1919 Papaver somniferum HOM05D004964 ORTHO05D005918 2.3e-26 123.6 207 38.2
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 4.0e-26 122.9 201 38.3
unitig_46.g18500 Utricularia gibba HOM05D004964 ORTHO05D005918 4.0e-26 122.9 213 37.6
unitig_47.g30763 Utricularia gibba HOM05D004964 ORTHO05D005918 4.0e-26 122.9 213 37.6
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 5.2e-26 122.5 201 38.3
Sp2g09220 Schrenkiella parvula HOM05D004964 ORTHO05D005918 5.2e-26 122.5 186 36.0
Thecc.05G270700 Theobroma cacao HOM05D004964 ORTHO05D005918 5.2e-26 122.5 204 37.3
CsaV3_2G009770 Cucumis sativus L. HOM05D004964 ORTHO05D005918 6.8e-26 122.1 203 39.9
Sed0000191 Sechium edule HOM05D004964 ORTHO05D005918 6.8e-26 122.1 204 40.7
AT1G10095 Arabidopsis thaliana HOM05D004964 ORTHO05D005918 8.9e-26 121.7 184 39.1
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.2e-25 121.3 201 38.3
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.2e-25 121.3 201 38.3
Gorai.004G249200 Gossypium raimondii HOM05D004964 ORTHO05D005918 1.5e-25 120.9 205 36.1
A06p47210 Brassica napus HOM05D004964 ORTHO05D005918 2.0e-25 120.6 184 37.0
BraA06t27592Z Brassica rapa HOM05D004964 ORTHO05D005918 2.0e-25 120.6 184 37.0
Aa31LG1G4780 Aethionema arabicum HOM05D004964 ORTHO05D005918 2.6e-25 120.2 206 36.9
AL1G20790 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 2.6e-25 120.2 202 36.1
Gohir.D08G234400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 2.6e-25 120.2 205 36.1
Gohir.A08G217400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 4.4e-25 119.4 206 36.4
MELO3C008708.2 Cucumis melo HOM05D004964 ORTHO05D005918 5.7e-25 119.0 204 38.7
QL03p029974 Quercus lobata HOM05D004964 ORTHO05D005918 5.7e-25 119.0 204 38.7
Cc02_g08800 Coffea canephora HOM05D004964 ORTHO05D005918 9.8e-25 118.2 207 37.7
Thhalv10000880m.g Eutrema salsugineum HOM05D004964 ORTHO05D005918 1.3e-24 117.9 178 38.2
Duzib106G0302 Durio zibethinus HOM05D004964 ORTHO05D005918 2.2e-24 117.1 206 37.9
BcaC06g34559 Brassica carinata HOM05D004964 ORTHO05D005918 4.9e-24 115.9 186 36.6
A09p21080 Brassica napus HOM05D004964 ORTHO05D005918 4.9e-24 115.9 203 35.0
C07p27180 Brassica napus HOM05D004964 ORTHO05D005918 4.9e-24 115.9 186 36.6
BolC7t43245H Brassica oleracea HOM05D004964 ORTHO05D005918 4.9e-24 115.9 186 36.6
GSVIVG01023502001 Vitis vinifera HOM05D004964 ORTHO05D005918 4.9e-24 115.9 202 39.1
CARHR010210 Cardamine hirsuta HOM05D004964 ORTHO05D005918 6.3e-24 115.5 188 37.2
BcaC06g31621 Brassica carinata HOM05D004964 ORTHO05D005918 1.8e-23 114.0 210 35.7
Carub.0001s0952 Capsella rubella HOM05D004964 ORTHO05D005918 1.8e-23 114.0 202 35.1
AL1G47560 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 2.4e-23 113.6 201 35.8
Lalb_Chr03g0040321 Lupinus albus HOM05D004964 ORTHO05D005918 2.4e-23 113.6 199 34.7
Ca_14064_v3 Cicer arietinum L. HOM05D004964 ORTHO05D005918 5.4e-23 112.5 201 33.3
Cfa006356 Carpinus fangiana HOM05D004964 ORTHO05D005918 9.2e-23 111.7 205 37.6
QL03p030425 Quercus lobata HOM05D004964 ORTHO05D005918 2.7e-22 110.2 204 37.3
CANSAT01G0497 Cannabis sativa HOM05D004964 ORTHO05D005918 7.8e-22 108.6 173 39.9
Glyma.03G113500 Glycine max HOM05D004964 ORTHO05D005918 1.3e-21 107.8 241 33.6
ECA233G3630 Erigeron canadensis HOM05D004964 ORTHO05D005918 1.5e-20 104.4 182 39.6
HanXRQChr07g0204481 Helianthus annuus HOM05D004964 ORTHO05D005918 2.5e-20 103.6 206 35.0
Lsat_1_v5_gn_8_24860 Lactuca sativa HOM05D004964 ORTHO05D005918 2.5e-20 103.6 213 32.9
SalBow6G5984 Salvia bowleyana HOM05D004964 ORTHO05D005918 5.6e-20 102.4 230 32.6
Ciclev10020293m.g Citrus clementina HOM05D004964 ORTHO05D005918 2.1e-19 100.5 202 34.7
arahy.Tifrunner.gnm1.ann1.H9CC2T Arachis hypogaea HOM05D004964 ORTHO05D005918 6.1e-19 99.0 196 32.1
AUR62008995 Chenopodium quinoa HOM05D004964 ORTHO05D005918 6.1e-19 99.0 154 39.0
Atru.chr2.987 Acer truncatum HOM05D004964 ORTHO05D005918 8.0e-19 98.6 168 38.1
MD12G1248000 Malus domestica HOM05D004964 ORTHO05D005918 1.0e-18 98.2 112 44.6
MBI07_g16903_MAGBIO Magnolia biondii HOM05D004964 ORTHO05D005918 3.1e-18 96.7 221 33.0
Hund13719 Selenicereus undatus HOM05D004964 ORTHO05D005918 4.0e-18 96.3 171 36.8
AUR62023306 Chenopodium quinoa HOM05D004964 ORTHO05D005918 5.2e-18 95.9 154 38.3
Phvul.010G051000 Phaseolus vulgaris HOM05D004964 ORTHO05D005918 5.2e-18 95.9 174 36.2
arahy.Tifrunner.gnm1.ann1.J3Q9FM Arachis hypogaea HOM05D004964 ORTHO05D005918 1.2e-17 94.7 196 31.1
Glyma.07G113400 Glycine max HOM05D004964 ORTHO05D005918 1.2e-17 94.7 137 40.9
Lj3g0015193 Lotus japonicus HOM05D004964 ORTHO05D005918 1.2e-17 94.7 200 32.0
Os01g0684800 Oryza sativa ssp. japonica HOM05D004964 ORTHO05D005918 1.5e-17 94.4 174 33.9
ATR0736G161 Amborella trichopoda HOM05D004964 ORTHO05D005918 3.4e-17 93.2 221 32.1
Zm00001eb229480 Zea mays HOM05D004964 ORTHO05D005918 5.8e-17 92.4 154 34.4
DCAR_022832 Daucus carota HOM05D004964 ORTHO05D005918 9.8e-17 91.7 215 32.6
C07p27190 Brassica napus HOM05D004964 ORTHO05D005918 1.3e-16 91.3 120 42.5
BolC7t43246H Brassica oleracea HOM05D004964 ORTHO05D005918 1.3e-16 91.3 120 42.5
Ah.10g037790 Amaranthus hybridus HOM05D004964 ORTHO05D005918 6.4e-16 89.0 147 42.9
BraA09t37709Z Brassica rapa HOM05D004964 ORTHO05D005918 6.4e-16 89.0 203 31.0
COL.COLO4_00075 Corchorus olitorius HOM05D004964 ORTHO05D005918 6.4e-16 89.0 163 35.0
TPR.G33137 Trifolium pratense HOM05D004964 ORTHO05D005918 6.4e-16 89.0 160 34.4
CiPaw.07G072600 Carya illinoinensis HOM05D004964 ORTHO05D005918 8.3e-16 88.6 157 38.2
TPR.G17496 Trifolium pratense HOM05D004964 ORTHO05D005918 1.1e-15 88.2 217 30.0
HPP92_003061 Vanilla planifolia HOM05D004964 ORTHO05D005918 1.9e-15 87.4 176 34.1
Psat4g225120 Pisum sativum HOM05D004964 ORTHO05D005918 3.2e-15 86.7 133 36.1
Medtr8g006785 Medicago truncatula HOM05D004964 ORTHO05D005918 9.2e-15 85.1 171 32.2
BcaB07g30949 Brassica carinata HOM05D004964 ORTHO05D005918 1.2e-14 84.7 166 32.5
QL03p030368 Quercus lobata HOM05D004964 ORTHO05D005918 3.5e-14 83.2 195 33.3
MD12G1248600 Malus domestica HOM05D004964 ORTHO05D005918 4.6e-14 82.8 117 44.4
AL1G47570 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 1.0e-13 81.6 161 33.5
Eucgr.H04227 Eucalyptus grandis HOM05D004964 ORTHO05D005918 1.0e-13 81.6 140 39.3
AL1G20660 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 3.9e-13 79.7 165 35.2
CARHR222860 Cardamine hirsuta HOM05D004964 ORTHO05D005918 1.5e-12 77.8 58 56.9
Hund12147 Selenicereus undatus HOM05D004964 ORTHO05D005918 7.3e-12 75.5 165 32.7
AagrBONN_evm.TU.Sc2ySwM_340.245 Anthoceros agrestis HOM05D004964 ORTHO05D005918 2.1e-11 73.9 195 30.8
TPR.G15846 Trifolium pratense HOM05D004964 ORTHO05D005918 1.4e-10 71.2 78 47.4
QL03p030280 Quercus lobata HOM05D004964 ORTHO05D005918 3.1e-10 70.1 180 31.7
CDE04G2937 Ceratophyllum demersum HOM05D004964 ORTHO05D005918 6.8e-10 68.9 124 33.9
SHI23132 Sapria himalayana HOM05D000024 ORTHO05D000007 1.2e-09 68.2 81 42.0
Lsat_1_v5_gn_6_73440 Lactuca sativa HOM05D001771 ORTHO05D001876 1.5e-09 67.8 78 42.3
Pp3c11_21460 Physcomitrium patens HOM05D004964 ORTHO05D005918 2.6e-09 67.0 210 26.2
C09p26820 Brassica napus HOM05D004964 ORTHO05D005918 1.1e-07 61.6 81 40.7
Mapoly0082s0051 Marchantia polymorpha HOM05D004964 ORTHO05D005918 1.9e-07 60.8 148 28.4
Pp3c7_7610 Physcomitrium patens HOM05D004964 ORTHO05D005918 2.4e-07 60.5 210 23.3
SEGI_14565 Sequoiadendron giganteum HOM05D004964 ORTHO05D005918 2.1e-06 57.4 96 32.3
BcaC04g21837 Brassica carinata HOM05D004964 ORTHO05D005918 4.6e-06 56.2 73 41.1


User provided reference genes

Program Settings