Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold26G11219 Striga asiatica HOM05D035048 ORTHO05D000004 4.4e-130 468.0 241 100.0
SGA_v2.0_scaffold52G18930 Striga asiatica HOM05D035048 ORTHO05D012821 1.8e-43 180.3 328 38.7
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 1.1e-16 91.3 91 40.7
SGA_v2.0_scaffold242G44251 Striga asiatica HOM05D023911 ORTHO05D000004 1.2e-15 87.8 100 42.0
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 7.5e-13 78.6 82 43.9
SGA_v2.0_scaffold140G35467 Striga asiatica HOM05D000003 ORTHO05D000004 3.7e-12 76.3 79 43.0
SGA_v2.0_scaffold68G22836 Striga asiatica HOM05D035048 ORTHO05D000004 1.4e-11 74.3 85 35.3
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 2.4e-11 73.6 87 35.6
SGA_v2.0_scaffold71G23744 Striga asiatica HOM05D004014 ORTHO05D005890 7.0e-11 72.0 92 38.0
SGA_v2.0_scaffold191G40503 Striga asiatica HOM05D000003 ORTHO05D000004 1.2e-10 71.2 91 36.3
SGA_v2.0_scaffold275G46581 Striga asiatica HOM05D000003 ORTHO05D000004 4.5e-10 69.3 82 37.8
PSO210G3379 Papaver somniferum HOM05D000003 ORTHO05D000004 2.5e-08 63.5 112 32.1
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 1.2e-07 61.2 87 36.8
SGA_v2.0_scaffold380G50369 Striga asiatica HOM05D010565 ORTHO05D011213 2.1e-07 60.5 70 37.1
SGA_v2.0_scaffold43G16397 Striga asiatica HOM05D009140 ORTHO05D010215 2.7e-07 60.1 136 29.4
SGA_v2.0_scaffold142G35659 Striga asiatica HOM05D016777 ORTHO05D026198 3.6e-07 59.7 88 33.0
SGA_v2.0_scaffold67G22642 Striga asiatica HOM05D000407 ORTHO05D000004 1.0e-06 58.2 95 29.5
SGA_v2.0_scaffold382G50402 Striga asiatica HOM05D000003 ORTHO05D000004 1.4e-06 57.8 93 35.5
CANSAT01G2872 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-06 57.0 92 35.9
QL04p005287 Quercus lobata HOM05D000003 ORTHO05D000004 4.0e-06 56.2 54 42.6
SGA_v2.0_scaffold335G49110 Striga asiatica HOM05D001364 ORTHO05D001316 5.2e-06 55.8 56 48.2
Aa31sc165G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.8e-06 55.1 92 31.5
SGA_v2.0_scaffold121G33090 Striga asiatica HOM05D002093 ORTHO05D008902 8.8e-06 55.1 43 48.8


User provided reference genes

Program Settings