Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold269G46243 Striga asiatica HOM05D007010 ORTHO05D008591 1.8e-298 1028.5 526 100.0
SGA_v2.0_scaffold52G19071 Striga asiatica HOM05D007010 ORTHO05D008591 2.2e-46 191.0 123 86.2
SGA_v2.0_scaffold527G52724 Striga asiatica HOM05D037865 ORTHO05D406170 1.7e-14 85.1 53 79.2
SalBow2G0398 Salvia bowleyana HOM05D007010 ORTHO05D008591 7.3e-13 79.7 119 46.2
SalBow2G1284 Salvia bowleyana HOM05D007010 ORTHO05D008591 7.3e-13 79.7 119 46.2
Ciclev10009901m.g Citrus clementina HOM05D007010 ORTHO05D008591 2.1e-12 78.2 122 43.4
Migut.L00284 Erythranthe guttata HOM05D007010 ORTHO05D008591 1.5e-10 72.0 141 44.7
Rhsim11G0045900 Rhododendron simsii HOM05D007010 ORTHO05D008591 2.0e-10 71.6 119 43.7
Hma1.2p1_0450F.1_g155640 Hydrangea macrophylla HOM05D007010 ORTHO05D008591 4.4e-10 70.5 126 44.4
Atru.chr1.3280 Acer truncatum HOM05D007010 ORTHO05D008591 7.6e-10 69.7 125 44.0
SalBow7G3522 Salvia bowleyana HOM05D007010 ORTHO05D008591 7.6e-10 69.7 121 45.5
vmacro00158 Vaccinium macrocarpon HOM05D007010 ORTHO05D008591 1.7e-09 68.6 119 42.9
Dinv27969 Davidia involucrata HOM05D007010 ORTHO05D008591 3.8e-09 67.4 119 45.4
CDE07G1901 Ceratophyllum demersum HOM05D007010 ORTHO05D008591 1.4e-08 65.5 95 45.3
CAN.G208.75 Capsicum annuum HOM05D007010 ORTHO05D008591 1.9e-08 65.1 125 43.2
Eucgr.C02362 Eucalyptus grandis HOM05D007010 ORTHO05D008591 4.1e-08 63.9 123 43.9
Dinv23425 Davidia involucrata HOM05D000575 ORTHO05D004448 1.2e-07 62.4 119 46.2
Solyc12g095940.1 Solanum lycopersicum HOM05D007010 ORTHO05D008591 1.2e-07 62.4 121 42.1
Sopen12g031840 Solanum pennellii HOM05D007010 ORTHO05D008591 1.2e-07 62.4 121 42.1
PGSC0003DMG400029388 Solanum tuberosum HOM05D007010 ORTHO05D008591 1.2e-07 62.4 121 41.3
Glyma.07G198700 Glycine max HOM05D007010 ORTHO05D008591 1.6e-07 62.0 124 43.5
Oeu018653.1 Olea europaea HOM05D007010 ORTHO05D008591 1.6e-07 62.0 120 42.5
Oeu037327.1 Olea europaea HOM05D007010 ORTHO05D008591 2.1e-07 61.6 126 46.8
Thecc.09G051700 Theobroma cacao HOM05D007010 ORTHO05D008591 6.0e-07 60.1 133 38.3
Nitab4.5_0000738g0150 Nicotiana tabacum HOM05D007010 ORTHO05D008591 1.0e-06 59.3 123 43.1
Lsat_1_v5_gn_9_89520 Lactuca sativa HOM05D007010 ORTHO05D008591 1.7e-06 58.5 120 42.5
Nitab4.5_0011306g0020 Nicotiana tabacum HOM05D007010 ORTHO05D008591 1.7e-06 58.5 119 40.3
Psat7g115760 Pisum sativum HOM05D007010 ORTHO05D008591 1.7e-06 58.5 125 45.6
ClCG05G017750 Citrullus lanatus HOM05D007010 ORTHO05D008591 3.0e-06 57.8 91 48.4
Lj7P280T30 Lonicera japonica HOM05D007010 ORTHO05D008591 3.0e-06 57.8 119 41.2
TAR383G0702 Trochodendron aralioides HOM05D007010 ORTHO05D008591 3.0e-06 57.8 122 39.3
Lalb_Chr05g0218511 Lupinus albus HOM05D007010 ORTHO05D008591 3.9e-06 57.4 128 41.4
Sp6g31840 Schrenkiella parvula HOM05D007010 ORTHO05D008591 5.1e-06 57.0 127 40.2
Glyma.13G177700 Glycine max HOM05D007010 ORTHO05D008591 8.6e-06 56.2 120 41.7
Sed0004842 Sechium edule HOM05D007010 ORTHO05D008591 8.6e-06 56.2 88 50.0


User provided reference genes

Program Settings