Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold268G46209 Striga asiatica HOM05D011541 ORTHO05D013911 1.9e-136 489.2 248 100.0
SGA_v2.0_scaffold14G07113 Striga asiatica HOM05D011541 ORTHO05D013911 5.2e-78 295.0 166 93.4
SGA_v2.0_scaffold148G36477 Striga asiatica HOM05D011541 ORTHO05D013911 7.3e-56 221.5 165 73.9
SGA_v2.0_scaffold10G05478 Striga asiatica HOM05D011541 ORTHO05D013911 3.0e-49 199.5 315 41.3
SGA_v2.0_scaffold36G14572 Striga asiatica HOM05D011541 ORTHO05D013911 2.8e-47 193.0 147 75.5
SGA_v2.0_scaffold105G30320 Striga asiatica HOM05D011541 ORTHO05D013911 1.2e-45 187.6 301 39.9
SGA_v2.0_scaffold53G19404 Striga asiatica HOM05D011541 ORTHO05D013911 7.1e-43 178.3 313 40.3
SGA_v2.0_scaffold59G20729 Striga asiatica HOM05D011541 ORTHO05D013911 3.9e-41 172.6 286 40.9
SGA_v2.0_scaffold179G39547 Striga asiatica HOM05D011541 ORTHO05D013911 1.0e-28 131.3 217 41.9
SGA_v2.0_scaffold112G31657 Striga asiatica HOM05D011541 ORTHO05D013911 2.7e-26 123.2 189 44.4
SGA_v2.0_scaffold68G22924 Striga asiatica HOM05D011541 ORTHO05D013911 3.5e-26 122.9 103 63.1
SGA_v2.0_scaffold83G26343 Striga asiatica HOM05D011541 ORTHO05D013911 2.9e-20 103.2 191 40.3
SGA_v2.0_scaffold310G48214 Striga asiatica HOM05D011541 ORTHO05D013911 7.9e-18 95.1 256 32.0
SGA_v2.0_scaffold31G12735 Striga asiatica HOM05D009828 ORTHO05D013311 1.0e-17 94.7 192 35.4
SGA_v2.0_scaffold15G07208 Striga asiatica HOM05D009828 ORTHO05D013311 1.8e-17 94.0 199 35.2
SGA_v2.0_scaffold4G02358 Striga asiatica HOM05D009828 ORTHO05D013311 9.1e-14 81.6 191 34.0
SGA_v2.0_scaffold55G19890 Striga asiatica HOM05D009828 ORTHO05D013311 2.6e-13 80.1 94 45.7
SGA_v2.0_scaffold46G17479 Striga asiatica HOM05D009828 ORTHO05D013311 5.9e-13 79.0 192 32.8
SGA_v2.0_scaffold211G42136 Striga asiatica HOM05D009828 ORTHO05D013311 1.3e-12 77.8 174 33.3
SGA_v2.0_scaffold36G14526 Striga asiatica HOM05D009828 ORTHO05D013311 2.2e-12 77.0 90 46.7
SGA_v2.0_scaffold128G34095 Striga asiatica HOM05D020090 ORTHO05D021022 3.6e-10 69.7 115 38.3
SGA_v2.0_scaffold272G46343 Striga asiatica HOM05D009828 ORTHO05D013311 6.1e-10 68.9 174 34.5
SGA_v2.0_scaffold41G15840 Striga asiatica HOM05D009828 ORTHO05D013311 1.8e-09 67.4 174 33.9
SGA_v2.0_scaffold333G49003 Striga asiatica HOM05D009828 ORTHO05D013311 3.9e-09 66.2 96 40.6
Hma1.2p1_0181F.1_g079980 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.5e-08 64.3 76 43.4
Medtr6g022470 Medicago truncatula HOM05D000017 ORTHO05D000013 2.6e-08 63.5 89 41.6
SGA_v2.0_scaffold68G22923 Striga asiatica HOM05D011541 ORTHO05D013911 2.6e-08 63.5 136 40.4
Hma1.2p1_0048F.1_g028050 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.3e-08 63.2 83 43.4
Hma1.2p1_0624F.1_g191260 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.4e-08 62.8 105 36.2
Rhsim13G0222200 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.3e-07 61.2 77 39.0
Rhsim02G0197700 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.7e-07 60.8 78 41.0
Rhsim10G0126100 Rhododendron simsii HOM05D000017 ORTHO05D004107 1.7e-07 60.8 77 40.3
Medtr3g436320 Medicago truncatula HOM05D000017 ORTHO05D010633 2.2e-07 60.5 98 39.8
Hma1.2p1_0199F.1_g085640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.8e-07 60.1 77 42.9
SGA_v2.0_scaffold167G38438 Striga asiatica HOM05D011744 ORTHO05D401765 3.7e-07 59.7 224 27.7
Hma1.2p1_2038F.1_g312050 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.8e-07 59.3 76 40.8
Hma1.2p1_0436F.1_g152740 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.3e-07 58.9 91 40.7
Migut.N02018 Erythranthe guttata HOM05D000017 ORTHO05D000013 8.2e-07 58.5 132 33.3
Dinv14599 Davidia involucrata HOM05D000017 ORTHO05D000013 1.4e-06 57.8 99 34.3
Hma1.2p1_0157F.1_g068990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.4e-06 57.8 77 42.9
Hma1.2p1_1051F.1_g252080 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.4e-06 57.0 88 31.8
Hma1.2p1_0049F.1_g028220 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.1e-06 56.2 86 32.6
Hma1.2p1_0068F.1_g037160 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.1e-06 56.2 101 37.6
SGA_v2.0_scaffold29G12302 Striga asiatica HOM05D011744 ORTHO05D021022 7.0e-06 55.5 60 51.7
Dinv10124 Davidia involucrata HOM05D000017 ORTHO05D000013 9.1e-06 55.1 88 34.1
Hma1.2p1_0026F.1_g016405 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.1e-06 55.1 98 34.7
Hma1.2p1_0292F.1_g115670 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.1e-06 55.1 98 34.7
Hma1.2p1_1314F.1_g275035 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.1e-06 55.1 98 34.7


User provided reference genes

Program Settings