Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold266G46147 Striga asiatica HOM05D029849 ORTHO05D011912 7.4e-80 300.8 193 100.0
SGA_v2.0_scaffold50G18510 Striga asiatica HOM05D029849 ORTHO05D011912 6.3e-71 271.2 218 84.9
SGA_v2.0_scaffold74G24554 Striga asiatica HOM05D029849 ORTHO05D011912 3.8e-44 182.2 218 70.2
SGA_v2.0_scaffold295G47490 Striga asiatica HOM05D029849 ORTHO05D011912 4.0e-25 119.0 186 49.5
SGA_v2.0_scaffold3G01620 Striga asiatica HOM05D018395 ORTHO05D011912 3.3e-19 99.4 93 51.6
SGA_v2.0_scaffold11G05582 Striga asiatica HOM05D018166 ORTHO05D011912 5.2e-17 92.0 100 47.0
SGA_v2.0_scaffold25G11032 Striga asiatica HOM05D018612 ORTHO05D011912 4.9e-15 85.5 101 48.5
SGA_v2.0_scaffold147G36332 Striga asiatica HOM05D013095 ORTHO05D011912 3.2e-14 82.8 103 44.7
SGA_v2.0_scaffold85G26590 Striga asiatica HOM05D013095 ORTHO05D011912 3.2e-14 82.8 103 44.7
SGA_v2.0_scaffold139G35420 Striga asiatica HOM05D018395 ORTHO05D011912 1.2e-13 80.9 63 58.7
SGA_v2.0_scaffold14G06988 Striga asiatica HOM05D018395 ORTHO05D011912 1.2e-13 80.9 63 58.7
SGA_v2.0_scaffold223G42854 Striga asiatica HOM05D018395 ORTHO05D011912 1.2e-13 80.9 63 58.7
SGA_v2.0_scaffold22G09774 Striga asiatica HOM05D018395 ORTHO05D011912 1.2e-13 80.9 63 58.7
SGA_v2.0_scaffold332G48976 Striga asiatica HOM05D018395 ORTHO05D011912 1.2e-13 80.9 63 58.7
SGA_v2.0_scaffold21G09368 Striga asiatica HOM05D018166 ORTHO05D011912 3.5e-13 79.3 111 38.7
SGA_v2.0_scaffold99G29481 Striga asiatica HOM05D018166 ORTHO05D011912 1.3e-12 77.4 111 37.8
SGA_v2.0_scaffold355G49765 Striga asiatica HOM05D013095 ORTHO05D011912 1.7e-12 77.0 89 46.1
SGA_v2.0_scaffold117G32327 Striga asiatica HOM05D018166 ORTHO05D011912 2.3e-12 76.6 111 37.8
SGA_v2.0_scaffold211G42115 Striga asiatica HOM05D018612 ORTHO05D011912 2.3e-12 76.6 91 40.7
SGA_v2.0_scaffold6G03468 Striga asiatica HOM05D018395 ORTHO05D011912 6.6e-12 75.1 77 51.9
SGA_v2.0_scaffold96G29033 Striga asiatica HOM05D018166 ORTHO05D011912 6.6e-12 75.1 111 37.8
SGA_v2.0_scaffold85G26669 Striga asiatica HOM05D018166 ORTHO05D011912 8.6e-12 74.7 97 39.2
SGA_v2.0_scaffold223G42819 Striga asiatica HOM05D018612 ORTHO05D011912 2.5e-11 73.2 91 38.5
SGA_v2.0_scaffold158G37502 Striga asiatica HOM05D018612 ORTHO05D011912 3.3e-11 72.8 91 38.5
SalBow6G4476 Salvia bowleyana HOM05D010847 ORTHO05D009453 1.6e-10 70.5 95 42.1
SGA_v2.0_scaffold5187G54608 Striga asiatica HOM05D018612 ORTHO05D011912 3.6e-10 69.3 60 48.3
SalBow5G3908 Salvia bowleyana HOM05D010847 ORTHO05D009453 8.1e-10 68.2 113 38.1
SalBow8G5012 Salvia bowleyana HOM05D010847 ORTHO05D009453 8.1e-10 68.2 113 38.1
SGA_v2.0_scaffold279G46774 Striga asiatica HOM05D018612 ORTHO05D011912 8.1e-10 68.2 60 46.7
SalBow8G4103 Salvia bowleyana HOM05D008808 ORTHO05D009453 1.4e-09 67.4 106 34.0
SalBow8G5279 Salvia bowleyana HOM05D010847 ORTHO05D009453 2.3e-09 66.6 113 37.2
SGA_v2.0_scaffold136G35019 Striga asiatica HOM05D018612 ORTHO05D011912 5.2e-09 65.5 91 37.4
Peaxi162Scf00013g01517 Petunia axillaris HOM05D001883 ORTHO05D002184 6.8e-09 65.1 110 38.2
SalBow6G6190 Salvia bowleyana HOM05D008808 ORTHO05D009453 1.7e-07 60.5 116 32.8
SalBow7G0742 Salvia bowleyana HOM05D008808 ORTHO05D009453 1.7e-07 60.5 116 32.8
Nitab4.5_0001487g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.9e-07 58.9 110 33.6
Cfa012747 Carpinus fangiana HOM05D016218 ORTHO05D000309 6.4e-07 58.5 90 36.7
Nitab4.5_0003471g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 8.4e-07 58.2 104 31.7
Nitab4.5_0009994g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 8.4e-07 58.2 67 38.8
SalBow5G2011 Salvia bowleyana HOM05D008808 ORTHO05D009453 1.1e-06 57.8 75 42.7
SalBow5G4834 Salvia bowleyana HOM05D058812 ORTHO05D009453 1.1e-06 57.8 79 34.2
Rhsim03G0135300 Rhododendron simsii HOM05D010572 ORTHO05D012753 1.4e-06 57.4 111 33.3
SalBow8G3756 Salvia bowleyana HOM05D010847 ORTHO05D009453 1.4e-06 57.4 113 34.5
Cfa020977 Carpinus fangiana HOM05D016218 ORTHO05D000309 1.9e-06 57.0 90 35.6
SalBow5G4375 Salvia bowleyana HOM05D010847 ORTHO05D009453 1.9e-06 57.0 95 35.8
PGSC0003DMG400012467 Solanum tuberosum HOM05D008741 ORTHO05D010787 1.9e-06 57.0 76 38.2
Cfa017775 Carpinus fangiana HOM05D016218 ORTHO05D000309 2.4e-06 56.6 79 40.5
SalBow7G3411 Salvia bowleyana HOM05D009427 ORTHO05D009453 2.4e-06 56.6 90 36.7
PGSC0003DMG400039121 Solanum tuberosum HOM05D008741 ORTHO05D010787 2.4e-06 56.6 67 41.8
CAN.G1512.5 Capsicum annuum HOM05D008741 ORTHO05D010787 3.2e-06 56.2 104 32.7
Cfa014980 Carpinus fangiana HOM05D016218 ORTHO05D000309 3.2e-06 56.2 79 39.2
Potri.009G094001 Populus trichocarpa HOM05D010572 ORTHO05D012753 3.2e-06 56.2 107 30.8
Nitab4.5_0002500g0060 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.1e-06 55.8 107 30.8
Nitab4.5_0005946g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 5.4e-06 55.5 89 39.3
Cfa010691 Carpinus fangiana HOM05D016218 ORTHO05D000309 7.1e-06 55.1 79 38.0
Nn4g22099 Nelumbo nucifera HOM05D007742 ORTHO05D004072 7.1e-06 55.1 34 61.8
Nitab4.5_0002550g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 7.1e-06 55.1 107 36.4
Peaxi162Scf00543g00417 Petunia axillaris HOM05D001883 ORTHO05D002184 7.1e-06 55.1 80 32.5
SalBow1G0840 Salvia bowleyana HOM05D009427 ORTHO05D009453 7.1e-06 55.1 91 37.4
ECA238G3814 Erigeron canadensis HOM05D012511 ORTHO05D013076 9.2e-06 54.7 71 40.8
Nitab4.5_0000590g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 9.2e-06 54.7 89 37.1
Nitab4.5_0011837g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 9.2e-06 54.7 91 34.1
Nitab4.5_0013483g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 9.2e-06 54.7 67 38.8
Peaxi162Scf00005g04013 Petunia axillaris HOM05D001883 ORTHO05D002184 9.2e-06 54.7 80 32.5
Peaxi162Scf00034g00158 Petunia axillaris HOM05D001883 ORTHO05D002184 9.2e-06 54.7 80 32.5
Peaxi162Scf00034g00159 Petunia axillaris HOM05D001883 ORTHO05D002184 9.2e-06 54.7 80 32.5
Peaxi162Scf00248g00115 Petunia axillaris HOM05D001883 ORTHO05D002184 9.2e-06 54.7 80 32.5
Peaxi162Scf00322g00085 Petunia axillaris HOM05D001883 ORTHO05D002184 9.2e-06 54.7 80 32.5
Peaxi162Scf00344g00410 Petunia axillaris HOM05D001883 ORTHO05D002184 9.2e-06 54.7 80 32.5
Peaxi162Scf00360g00012 Petunia axillaris HOM05D001883 ORTHO05D002184 9.2e-06 54.7 80 32.5
Peaxi162Scf00395g00014 Petunia axillaris HOM05D001883 ORTHO05D002184 9.2e-06 54.7 80 32.5
Peaxi162Scf00434g00729 Petunia axillaris HOM05D001883 ORTHO05D002184 9.2e-06 54.7 80 32.5
Peaxi162Scf00966g00117 Petunia axillaris HOM05D001883 ORTHO05D002184 9.2e-06 54.7 80 32.5
PGSC0003DMG400017162 Solanum tuberosum HOM05D008741 ORTHO05D010787 9.2e-06 54.7 76 36.8
SGA_v2.0_scaffold470G52074 Striga asiatica HOM05D013095 ORTHO05D399408 9.2e-06 54.7 62 45.2


User provided reference genes

Program Settings