Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold265G46124 Striga asiatica HOM05D003067 ORTHO05D009378 3.3e-253 877.9 438 100.0
MSTRG.6118 Avicennia marina HOM05D003067 ORTHO05D009378 1.6e-82 310.8 283 56.2
Migut.J01329 Erythranthe guttata HOM05D003067 ORTHO05D009378 7.8e-69 265.4 272 53.3
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 3.8e-63 246.5 273 47.3
SGA_v2.0_scaffold214G42289 Striga asiatica HOM05D003067 ORTHO05D009378 1.3e-60 238.0 222 57.7
SalBow1G0452 Salvia bowleyana HOM05D003067 ORTHO05D009378 6.6e-60 235.7 276 47.1
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 1.5e-59 234.6 275 43.6
SGA_v2.0_scaffold113G31772 Striga asiatica HOM05D003067 ORTHO05D009378 2.1e-58 230.7 180 66.7
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 1.4e-57 228.0 255 46.7
Oeu043497.1 Olea europaea HOM05D003067 ORTHO05D009378 1.2e-48 198.4 263 44.1
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 1.5e-48 198.0 283 39.6
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 1.5e-48 198.0 283 39.9
Oeu043496.1 Olea europaea HOM05D003067 ORTHO05D009378 2.6e-48 197.2 263 43.3
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 4.5e-48 196.4 243 41.6
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 2.2e-47 194.1 285 38.9
Cc06_g15260 Coffea canephora HOM05D003067 ORTHO05D009378 2.4e-46 190.7 280 36.4
Nitab4.5_0001478g0120 Nicotiana tabacum HOM05D003067 ORTHO05D009378 5.4e-46 189.5 283 37.5
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 3.5e-45 186.8 280 36.8
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 1.3e-44 184.9 276 38.0
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 5.1e-44 183.0 261 39.5
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 8.7e-44 182.2 278 38.5
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 8.7e-44 182.2 279 38.4
Solyc12g010230.2 Solanum lycopersicum HOM05D003067 ORTHO05D009378 9.6e-43 178.7 261 38.7
Sopen12g005120 Solanum pennellii HOM05D003067 ORTHO05D009378 1.3e-42 178.3 254 38.2
TWI34G0508 Tripterygium wilfordii HOM05D003067 ORTHO05D009378 2.8e-42 177.2 290 37.6
CAN.G551.28 Capsicum annuum HOM05D003067 ORTHO05D009378 1.1e-41 175.3 291 34.0
CANSAT11G2322 Cannabis sativa HOM05D003067 ORTHO05D009378 1.8e-41 174.5 286 38.5
Gohir.D07G030100 Gossypium hirsutum HOM05D003067 ORTHO05D009378 2.4e-41 174.1 285 36.1
Gorai.001G031300 Gossypium raimondii HOM05D003067 ORTHO05D009378 6.9e-41 172.6 286 36.0
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 9.0e-41 172.2 301 32.9
Potri.018G110300 Populus trichocarpa HOM05D003067 ORTHO05D009378 1.2e-40 171.8 289 38.4
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 2.0e-40 171.0 290 35.5
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 2.0e-40 171.0 285 33.7
Potri.006G187500 Populus trichocarpa HOM05D003067 ORTHO05D009378 2.6e-40 170.6 291 36.8
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 3.4e-40 170.2 285 35.8
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 5.8e-40 169.5 276 38.4
Aqoxy7G03467 Aquilegia oxysepala HOM05D003067 ORTHO05D009378 5.8e-40 169.5 291 33.7
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 1.3e-39 168.3 313 33.9
HanXRQChr05g0133261 Helianthus annuus HOM05D003067 ORTHO05D009378 1.3e-39 168.3 275 38.5
Peaxi162Scf00108g00714 Petunia axillaris HOM05D003067 ORTHO05D009378 1.7e-39 167.9 289 35.3
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 4.9e-39 166.4 290 35.9
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 6.5e-39 166.0 285 35.8
Medtr2g450220 Medicago truncatula HOM05D003067 ORTHO05D009378 2.1e-37 161.0 295 34.2
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 7.9e-37 159.1 277 36.5
HPP92_017493 Vanilla planifolia HOM05D003067 ORTHO05D009378 2.3e-36 157.5 281 33.5
CDE06G1077 Ceratophyllum demersum HOM05D003067 ORTHO05D009378 5.1e-36 156.4 285 33.7
Zm00001eb374750 Zea mays HOM05D003067 ORTHO05D009378 4.3e-35 153.3 278 34.9
COL.COLO4_18774 Corchorus olitorius HOM05D003067 ORTHO05D009378 9.6e-35 152.1 262 34.4
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 1.3e-34 151.8 299 34.4
Thhalv10025917m.g Eutrema salsugineum HOM05D003067 ORTHO05D009378 1.6e-34 151.4 282 34.4
THA.LOC104803568 Tarenaya hassleriana HOM05D003067 ORTHO05D009378 6.3e-34 149.4 299 30.8
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 1.4e-33 148.3 294 32.0
ATR1153G020 Amborella trichopoda HOM05D003067 ORTHO05D009378 4.1e-33 146.7 287 33.8
ClCG02G017140 Citrullus lanatus HOM05D003067 ORTHO05D009378 2.0e-32 144.4 299 31.8
BcaC09g51887 Brassica carinata HOM05D003067 ORTHO05D009378 2.6e-32 144.1 287 33.4
AL7G21080 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 3.4e-32 143.7 305 31.8
A01p07190 Brassica napus HOM05D003067 ORTHO05D009378 3.4e-32 143.7 287 33.1
C01p07950 Brassica napus HOM05D003067 ORTHO05D009378 3.4e-32 143.7 287 33.4
BolC1t00782H Brassica oleracea HOM05D003067 ORTHO05D009378 3.4e-32 143.7 287 33.4
Sp7g28870 Schrenkiella parvula HOM05D003067 ORTHO05D009378 4.5e-32 143.3 281 33.5
BraA01t00670Z Brassica rapa HOM05D003067 ORTHO05D009378 1.3e-31 141.7 287 32.8
CsaV3_2G003640 Cucumis sativus L. HOM05D003067 ORTHO05D009378 1.7e-31 141.4 282 31.9
DCAR_014819 Daucus carota HOM05D003067 ORTHO05D009378 2.2e-31 141.0 247 33.6
Nitab4.5_0002315g0060 Nicotiana tabacum HOM05D003067 ORTHO05D009378 2.9e-31 140.6 252 34.5
Os06g0183700 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D009378 2.9e-31 140.6 292 32.2
FAN19G0469 Fragaria x ananassa HOM05D003067 ORTHO05D009378 1.1e-30 138.7 165 43.6
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 1.1e-30 138.7 194 39.2
Lj6g0006451 Lotus japonicus HOM05D003067 ORTHO05D009378 1.9e-30 137.9 277 35.0
BcaNung03423 Brassica carinata HOM05D003067 ORTHO05D009378 9.3e-30 135.6 301 30.9
MELO3C004431.2 Cucumis melo HOM05D003067 ORTHO05D009378 1.6e-29 134.8 309 30.4
Lsat_1_v5_gn_8_59821 Lactuca sativa HOM05D003067 ORTHO05D009378 1.8e-28 131.3 268 34.0
Sabra18G0093300 Salix brachista HOM05D003067 ORTHO05D009378 1.1e-27 128.6 354 29.4
vmacro06093 Vaccinium macrocarpon HOM05D003067 ORTHO05D009378 1.1e-27 128.6 248 34.7
Duzib150G0133 Durio zibethinus HOM05D003067 ORTHO05D009378 3.3e-27 127.1 236 29.2
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 9.7e-27 125.6 219 32.0
AT4G30993 Arabidopsis thaliana HOM05D003067 ORTHO05D009378 1.7e-23 114.8 218 34.9
CARHR238890 Cardamine hirsuta HOM05D003067 ORTHO05D009378 1.9e-22 111.3 180 37.2
PGSC0003DMG400007894 Solanum tuberosum HOM05D003067 ORTHO05D009378 3.2e-22 110.5 182 35.7
Cpa.g.sc46.125 Carica papaya HOM05D003067 ORTHO05D009378 2.7e-21 107.5 192 34.9
MD02G1010100 Malus domestica HOM05D003067 ORTHO05D009378 2.0e-19 101.3 201 34.3
SGA_v2.0_scaffold10G05218 Striga asiatica HOM05D016034 ORTHO05D000013 1.9e-14 84.7 62 64.5
MD02G1010000 Malus domestica HOM05D003067 ORTHO05D009378 4.2e-14 83.6 86 50.0
SGA_v2.0_scaffold13G06337 Striga asiatica HOM05D016034 ORTHO05D000013 5.5e-14 83.2 53 69.8
SGA_v2.0_scaffold6G03233 Striga asiatica HOM05D001567 ORTHO05D001409 2.7e-13 80.9 56 69.6
SGA_v2.0_scaffold68G22893 Striga asiatica HOM05D016034 ORTHO05D009378 3.0e-12 77.4 57 64.9
CSS0014498 Camellia sinensis var. sinensis HOM05D003067 ORTHO05D009378 5.1e-12 76.6 149 30.2
Glyma.15G205500 Glycine max HOM05D003067 ORTHO05D009378 1.5e-11 75.1 223 29.1
SGA_v2.0_scaffold17G08172 Striga asiatica HOM05D016034 ORTHO05D000013 4.4e-11 73.6 49 67.3
Nitab4.5_0000525g0300 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.1e-09 68.9 177 26.0
GSVIVG01003739001 Vitis vinifera HOM05D003067 ORTHO05D009378 3.1e-09 67.4 55 58.2
SGA_v2.0_scaffold39G15191 Striga asiatica HOM05D000017 ORTHO05D000013 1.6e-08 65.1 119 36.1
SGA_v2.0_scaffold107G30746 Striga asiatica HOM05D016034 ORTHO05D009378 2.6e-08 64.3 40 67.5
SGA_v2.0_scaffold205G41701 Striga asiatica HOM05D016034 ORTHO05D000013 4.5e-08 63.5 47 61.7
SGA_v2.0_scaffold54G19528 Striga asiatica HOM05D016034 ORTHO05D000013 1.5e-06 58.5 50 58.0


User provided reference genes

Program Settings